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Atomic Physics in the Quest for Fusion Energy and ITER (open access)

Atomic Physics in the Quest for Fusion Energy and ITER

The urgent quest for new energy sources has led developed countries, representing over half of the world population, to collaborate on demonstrating the scientific and technological feasibility of magnetic fusion through the construction and operation of ITER. Data on high-Z ions will be important in this quest. Tungsten plasma facing components have the necessary low erosion rates and low tritium retention but the high radiative efficiency of tungsten ions leads to stringent restrictions on the concentration of tungsten ions in the burning plasma. The influx of tungsten to the burning plasma will need to be diagnosed, understood and stringently controlled. Expanded knowledge of the atomic physics of neutral and ionized tungsten will be important to monitor impurity influxes and derive tungsten concentrations. Also, inert gases such as argon and xenon will be used to dissipate the heat flux flowing to the divertor. This article will summarize the spectroscopic diagnostics planned for ITER and outline areas where additional data is needed.
Date: February 27, 2008
Creator: Skinner, Charles H.
System: The UNT Digital Library
Aza Cope Rearrangement of Propargyl Enammonium Cations Catalyzed By a Self-Assembled `Nanozyme (open access)

Aza Cope Rearrangement of Propargyl Enammonium Cations Catalyzed By a Self-Assembled `Nanozyme

The tetrahedral [Ga{sub 4}L{sub 6}]{sup 12-} assembly (L = N,N-bis(2,3-dihydroxybenzoyl)-1,5-diaminonaphthalene) encapsulates a variety of cations, including propargyl enammonium cations capable of undergoing the aza Cope rearrangement. For propargyl enammonium substrates that are encapsulated in the [Ga{sub 4}L{sub 6}]{sup 12-} assembly, rate accelerations of up to 184 are observed when compared to the background reaction. After rearrangement, the product iminium ion is released into solution and hydrolyzed allowing for catalytic turnover. The activation parameters for the catalyzed and uncatalyzed reaction were determined, revealing that a lowered entropy of activation is responsible for the observed rate enhancements. The catalyzed reaction exhibits saturation kinetics; the rate data obey the Michaelis-Menten model of enzyme kinetics, and competitive inhibition using a non-reactive guest has been demonstrated.
Date: February 27, 2008
Creator: Hastings, Courntey J.; Fiedler, Dorothea; Bergman, Robert G. & Raymond, Kenneth N.
System: The UNT Digital Library
Combined low-temperature scanning tunneling/atomic force microscope for atomic resolution imaging and site-specific force spectroscopy (open access)

Combined low-temperature scanning tunneling/atomic force microscope for atomic resolution imaging and site-specific force spectroscopy

The authors present the design and first results of a low-temperature, ultrahigh vacuum scanning probe microscope enabling atomic resolution imaging in both scanning tunneling microscopy (STM) and noncontact atomic force microscopy (NC-AFM) modes. A tuning-fork-based sensor provides flexibility in selecting probe tip materials, which can be either metallic or nonmetallic. When choosing a conducting tip and sample, simultaneous STM/NC-AFM data acquisition is possible. Noticeable characteristics that distinguish this setup from similar systems providing simultaneous STM/NC-AFM capabilities are its combination of relative compactness (on-top bath cryostat needs no pit), in situ exchange of tip and sample at low temperatures, short turnaround times, modest helium consumption, and unrestricted access from dedicated flanges. The latter permits not only the optical surveillance of the tip during approach but also the direct deposition of molecules or atoms on either tip or sample while they remain cold. Atomic corrugations as low as 1 pm could successfully be resolved. In addition, lateral drifts rates of below 15 pm/h allow long-term data acquisition series and the recording of site-specific spectroscopy maps. Results obtained on Cu(111) and graphite illustrate the microscope's performance.
Date: February 27, 2008
Creator: Schwarz, Udo; Albers, Boris J.; Liebmann, Marcus; Schwendemann, Todd C.; Baykara, Mehmet Z.; Heyde, Markus et al.
System: The UNT Digital Library
High Harmonic Generation for N2 and CO2 beyond the Two-point Model (open access)

High Harmonic Generation for N2 and CO2 beyond the Two-point Model

None
Date: February 27, 2008
Creator: Guhr, M.; McFarland, B.K.; Farrell, J.P.; Bucksbaum, P.H. & /SLAC, PULSE /SLAC
System: The UNT Digital Library
Solubility of Anthracene in Ternary Solvent Mixtures of 2,2,4-Trimethylpentane + 2-Propanone + Alcohols at 298.15 K (open access)

Solubility of Anthracene in Ternary Solvent Mixtures of 2,2,4-Trimethylpentane + 2-Propanone + Alcohols at 298.15 K

This article discusses the solubility of anthracene in ternary solvent mixtures of 2,2,4-trimethylpentane + 2-propanone + alcohols at 298.15 K.
Date: February 27, 2008
Creator: Shayanfar, Ali; Soltani, Somaieh; Jabbaribar, Farnaz; Tamizi, Elnaz; Acree, William E. (William Eugene) & Jouyban, Abolghasem
System: The UNT Digital Library
Studies of Potential Inhibitors of Sodium Aluminosilicate Scales in High-Level Waste Evaporation (open access)

Studies of Potential Inhibitors of Sodium Aluminosilicate Scales in High-Level Waste Evaporation

The Savannah River Site (SRS) has 49 underground storage tanks used to store High Level Waste (HLW). The tank space in these tanks must be managed to support the continued operation of key facilities. The reduction of the tank volumes in these tanks are accomplished through the use of three atmospheric pressure HLW evaporators. For a decade, evaporation of highly alkaline HLW containing aluminum and silicates has produced sodium aluminosilicate scales causing both operation and criticality hazards in the 2H Evaporator System. Segregation of aluminum-rich wastes from silicate-rich wastes minimizes the amount of scale produced and reduces cleaning expenses, but does not eliminate the scaling nor increases operation flexibility in waste process. Similar issues have affected the aluminum refining industry for many decades. Over the past several years, successful commercial products have been identified to eliminate aluminosilicate fouling in the aluminum industry, but have not been utilized in a nuclear environment. Laboratory quantities of three proprietary aluminosilicate scale inhibitors have been produced and been shown to prevent formation of scales. SRNL has been actively testing these potential inhibitors to examine their radiation stability, radiolytic degradation behaviors, and downstream impacts to determine their viability within the HLW system. One of the …
Date: February 27, 2008
Creator: Wilmarth, W. R.; Oji, L. N.; Fellinger, T. L.; Hobbs, D. T. & Badheka, N. P.
System: The UNT Digital Library
Technology of the LSST Focal Plane (open access)

Technology of the LSST Focal Plane

None
Date: February 27, 2008
Creator: O'Connor, P.; Radeka, V.; Takacs, P.; Geary, J.; Gilmore, K.; Oliver, J. et al.
System: The UNT Digital Library
Temperature-controlled molecular depolarization gates in nuclear magnetic resonance (open access)

Temperature-controlled molecular depolarization gates in nuclear magnetic resonance

Down the drain: Cryptophane cages in combination with selective radiofrequency spin labeling can be used as molecular 'transpletor' units for transferring depletion of spin polarization from a hyperpolarized 'source' spin ensemble to a 'drain' ensemble. The flow of nuclei through the gate is adjustable by the ambient temperature, thereby enabling controlled consumption of hyperpolarization.
Date: February 27, 2008
Creator: Schroder, Leif; Schroder, Leif; Chavez, Lana; Meldrum, Tyler; Smith, Monica; Lowery, Thomas J. et al.
System: The UNT Digital Library
HYDROGEN EFFECTS ON THE BURST PROPERTIES OF TYPE 304L STAINLESS STEEL FLAWED VESSELS (open access)

HYDROGEN EFFECTS ON THE BURST PROPERTIES OF TYPE 304L STAINLESS STEEL FLAWED VESSELS

The effect of hydrogen on the burst properties Type 304L stainless steel vessels was investigated. The purpose of the study was to compare the burst properties of hydrogen-exposed stainless steel vessels burst with different media: water, helium gas, or deuterium gas. A second purpose of the tests was to provide data for the development of a predictive finite-element model. The burst tests were conducted on hydrogen-exposed and unexposed axially-flawed cylindrical vessels. The results indicate that samples burst pneumatically had lower volume ductility than those tested hydraulically. Deuterium gas tests had slightly lower ductility than helium gas tests. Burst pressures were not affected by burst media. Hydrogen-charged samples had lower volume ductility and slightly higher burst pressures than uncharged samples. Samples burst with deuterium gas fractured by quasi-cleavage near the inside wall. The results of the tests were used to improve a previously developed predictive finite-element model. The results show that predicting burst behavior requires as a material input the effect of hydrogen on the plastic strain to fracture from tensile tests. The burst test model shows that a reduction in the plastic strain to fracture of the material will result in lower volume ductility without a reduction in burst pressure …
Date: March 27, 2008
Creator: Morgan, M; Monica Hall, M; Ps Lam, P & Dean Thompson, D
System: The UNT Digital Library
Improved Bacterial and Viral Recoveries from 'Complex' Samples using Electrophoretically Assisted Acoustic Focusing (open access)

Improved Bacterial and Viral Recoveries from 'Complex' Samples using Electrophoretically Assisted Acoustic Focusing

Automated front-end sample preparation technologies can significantly enhance the sensitivity and reliability of biodetection assays [1]. We are developing advanced sample preparation technologies for biowarfare detection and medical point-of-care diagnostics using microfluidic systems with continuous sample processing capabilities. Here we report an electrophoretically assisted acoustic focusing technique to rapidly extract and enrich viral and bacterial loads from 'complex samples', applied in this case to human nasopharyngeal samples as well as simplified surrogates. The acoustic forces capture and remove large particles (> 2 {micro}m) such as host cells, debris, dust, and pollen from the sample. We simultaneously apply an electric field transverse to the flow direction to transport small ({le} 2 {micro}m), negatively-charged analytes into a separate purified recovery fluid using a modified H-filter configuration [Micronics US Patent 5,716,852]. Hunter and O'Brien combined transverse electrophoresis and acoustic focusing to measure the surface charge on large particles, [2] but to our knowledge, our work is the first demonstration combining these two techniques in a continuous flow device. Marina et al. demonstrated superimposed dielectrophoresis (DEP) and acoustic focusing for enhanced separations [3], but these devices have limited throughput due to the rapid decay of DEP forces. Both acoustic standing waves and electric fields …
Date: March 27, 2008
Creator: Ness, K.; Rose, K.; Jung, B.; Fisher, K. & Mariella, R. P., Jr.
System: The UNT Digital Library
Least Squares Magnetic-Field Optimization for Portable Nuclear Magnetic Resonance Magnet Design (open access)

Least Squares Magnetic-Field Optimization for Portable Nuclear Magnetic Resonance Magnet Design

Single-sided and mobile nuclear magnetic resonance (NMR) sensors have the advantages of portability, low cost, and low power consumption compared to conventional high-field NMR and magnetic resonance imaging (MRI) systems. We present fast, flexible, and easy-to-implement target field algorithms for mobile NMR and MRI magnet design. The optimization finds a global optimum ina cost function that minimizes the error in the target magnetic field in the sense of least squares. When the technique is tested on a ring array of permanent-magnet elements, the solution matches the classical dipole Halbach solution. For a single-sided handheld NMR sensor, the algorithm yields a 640 G field homogeneous to 16 100 ppm across a 1.9 cc volume located 1.5 cm above the top of the magnets and homogeneous to 32 200 ppm over a 7.6 cc volume. This regime is adequate for MRI applications. We demonstrate that the homogeneous region can be continuously moved away from the sensor by rotating magnet rod elements, opening the way for NMR sensors with adjustable"sensitive volumes."
Date: March 27, 2008
Creator: Paulsen, Jeffrey L; Franck, John; Demas, Vasiliki & Bouchard, Louis-S.
System: The UNT Digital Library
Resonant Auger Effect at High X-Ray Intensity (open access)

Resonant Auger Effect at High X-Ray Intensity

The resonant Auger effect of atomic neon exposed to high-intensity x-ray radiation in resonance with the 1s {yields} 3p transition is discussed. High intensity here means that the x-ray peak intensity is sufficient ({approx} 10{sup 18} W/cm{sup 2}) to induce Rabi oscillations between the neon ground state and the 1s{sup -1}3p ({sup 1}P) state within the relaxation lifetime of the inner-shell vacancy. For the numerical analysis presented, an effective two-level model, including a description of the resonant Auger decay process, is employed. Both coherent and chaotic x-ray pulses are treated. The latter are used to simulate radiation from x-ray free-electron lasers based on the principle of self-amplified spontaneous emission. Observing x-ray-driven atomic population dynamics in the time domain is challenging for chaotic pulse ensembles. A more practical option for experiments using x-ray free-electron lasers is to measure the line profiles in the kinetic energy distribution of the resonant Auger electron. This provides information on both atomic population dynamics and x-ray pulse properties.
Date: March 27, 2008
Creator: Rohringer, N & Santra, R
System: The UNT Digital Library
Separation of Yeast Cells from MS2 Viruses Using Acoustic Radiation Force (open access)

Separation of Yeast Cells from MS2 Viruses Using Acoustic Radiation Force

We report a rapid and robust separation of Saccharomyces cerevisiae and MS2 bacteriophage using acoustic focusing in a microfluidic device. A piezoelectric transducer (PZT) generates acoustic standing waves in the microchannel. These standing waves induce acoustic radiation force fields that direct microparticles towards the nodes (i.e., pressure minima) or the anti-nodes (i.e., pressure maxima) of the standing waves depending on the relative compressidensity between the particle and the suspending liquid.[1] For particles larger than 2 {micro}m, the transverse velocities generated by these force fields enable continuous, high throughput separation. Extensive work in the last decade [2-4] has demonstrated acoustic focusing for manipulating microparticles or biological samples in microfluidic devices. This prior work has primarily focused on experimental realization of acoustic focusing without modeling or with limited one-dimensional modeling estimates. We recently developed a finite element modeling tool to predict the two-dimensional acoustic radiation force field perpendicular to the flow direction in microfluidic devices.[1] Here we compare results from this model with experimental parametric studies including variations of the PZT driving frequencies and voltages as well as various particle sizes and compressidensities. These experimental parametric studies also provide insight into the development of an adjustable 'virtual' pore-size filter as well as …
Date: March 27, 2008
Creator: Jung, B.; Fisher, K.; Ness, K.; Rose, K. A. & Mariella, R. P., Jr.
System: The UNT Digital Library
L-Shell Spectroscopy of Au as a Temperature Diagnostic Tool (open access)

L-Shell Spectroscopy of Au as a Temperature Diagnostic Tool

In order to develop plasma diagnostic for reduced-size hot hohlraums under laser irradiation, they have studied the L-shell emission from highly charged gold ions in the SuperEBIT electron beam ion trap. The resolving power necessary to identify emission features from individual charge states in a picket fence pattern has been estimated, and the observed radiation features have been compared with atomic structure calculations. They find that the strong 3d{sub 5/2} {yields} 2p{sub 3/2} emission features are particularly useful in determining the charge state distribution and average ion charge <Z>, which are strongly sensitive to the electron temperature.
Date: March 27, 2008
Creator: Trabert, E; Hansen, S B; Beiersdorfer, P; Brown, G V; Widmann, K & Chung, H K
System: The UNT Digital Library
SHIELDING ANALYSIS FOR X-RAY SOURCES GENERATED IN TARGET CHAMBER OF THE NATIONAL IGNITION FACILITY (open access)

SHIELDING ANALYSIS FOR X-RAY SOURCES GENERATED IN TARGET CHAMBER OF THE NATIONAL IGNITION FACILITY

Prompt doses from x-rays generated as result of laser beam interaction with target material are calculated at different locations inside the National Ignition Facility (NIF). The maximum dose outside a Target Chamber diagnostic port is {approx} 1 rem for a shot utilizing the 192 laser beams and 1.8 MJ of laser energy. The dose during a single bundle shot (8 laser beams) drops to {approx} 40 mrem. Doses calculated outside the Target Bay doors and inside the Switchyards (except for the 17 ft.-6 in. level) range from a fraction of mrem to about 11 mrem for 192 beams, and scales down proportionally with smaller number of beams. At the 17ft.-6 in. level, two diagnostic ports are directly facing two of the Target Bay doors and the maximum doses outside the doors are 51 and 15.5 mrem, respectively. Shielding each of the two Target Bay doors with 1/4 in. Pb reduces the dose by factor of fifty. One or two bundle shots (8 to 16 laser beams) present a small hazard to personnel in the Switchyards.
Date: March 27, 2008
Creator: Khater, H Y; Brereton, S J & Singh, M S
System: The UNT Digital Library
BIOTIGER, A NATURAL MICROBIAL PRODUCT FOR ENHANCED HYDROCARBON RECOVERY FROM OIL SANDS. (open access)

BIOTIGER, A NATURAL MICROBIAL PRODUCT FOR ENHANCED HYDROCARBON RECOVERY FROM OIL SANDS.

BioTiger{trademark} is a unique microbial consortia that resulted from over 8 years of extensive microbiology screening and characterization of samples collected from a century-old Polish waste lagoon. BioTiger{trademark} shows rapid and complete degradation of aliphatic and aromatic hydrocarbons, produces novel surfactants, is tolerant of both chemical and metal toxicity and shows good activity at temperature and pH extremes. Although originally developed and used by the U.S. Department of Energy for bioremediation of oil-contaminated soils, recent efforts have proven that BioTiger{trademark} can also be used to increase hydrocarbon recovery from oil sands. This enhanced ex situ oil recovery process utilizes BioTiger{trademark} to optimize bitumen separation. A floatation test protocol with oil sands from Ft. McMurray, Canada was used for the BioTiger{trademark} evaluation. A comparison of hot water extraction/floatation test of the oil sands performed with BioTiger{trademark} demonstrated a 50% improvement in separation as measured by gravimetric analysis in 4 h and a five-fold increase at 25 hr. Since BioTiger{trademark} performs well at high temperatures and process engineering can enhance and sustain metabolic activity, it can be applied to enhance recovery of hydrocarbons from oil sands or other complex recalcitrant matrices.
Date: May 27, 2008
Creator: Brigmon, R; Topher Berry, T; Whitney Jones, W & Charles Milliken, C
System: The UNT Digital Library
Coordination of Retail Demand Response with Midwest ISO Markets (open access)

Coordination of Retail Demand Response with Midwest ISO Markets

The Organization of Midwest ISO States (OMS) launched the Midwest Demand Resource Initiative (MWDRI) in 2007 to identify barriers to deploying demand response (DR) resources in the Midwest Independent System Operator (MISO) region and develop policies to overcome them. The MWDRI stakeholders decided that a useful initial activity would be to develop more detailed information on existing retail DR programs and dynamic pricing tariffs, program rules, and utility operating practices. This additional detail could then be used to assess any"seams issues" affecting coordination and integration of retail DR resources with MISO's wholesale markets. Working with state regulatory agencies, we conducted a detailed survey of existing DR programs, dynamic pricing tariffs, and their features in MISO states. Utilities were asked to provide information on advance notice requirements to customers, operational triggers used to call events (e.g. system emergencies, market conditions, local emergencies), use of these DR resources to meet planning reserves requirements, DR resource availability (e.g., seasonal, annual), participant incentive structures, and monitoring and verification (M&V) protocols. This report describes the results of this comprehensive survey and discusses policy implications for integrating legacy retail DR programs and dynamic pricing tariffs into organized wholesale markets. Survey responses from 37 MISO members and …
Date: May 27, 2008
Creator: Bharvirkar, Ranjit; Bharvirkar, Ranjit; Goldman, Charles; Heffner, Grayson & Sedano, Richard
System: The UNT Digital Library
DEMONSTRATION OF EQUIVALENCY OF CANE AND SOFTWOOD BASED CELOTEX FOR MODEL 9975 SHIPPING PACKAGES (open access)

DEMONSTRATION OF EQUIVALENCY OF CANE AND SOFTWOOD BASED CELOTEX FOR MODEL 9975 SHIPPING PACKAGES

Cane-based Celotex{trademark} has been used extensively in various Department of Energy (DOE) packages as a thermal insulator and impact absorber. Cane-based Celotex{trademark} fiberboard was only manufactured by Knight-Celotex Fiberboard at their Marrero Plant in Louisiana. However, Knight-Celotex Fiberboard shut down their Marrero Plant in early 2007 due to impacts from hurricane Katrina and other economic factors. Therefore, cane-based Celotex{trademark} fiberboard is no longer available for use in the manufacture of new shipping packages requiring the material as a component. Current consolidation plans for the DOE Complex require the procurement of several thousand new Model 9975 shipping packages requiring cane-based Celotex{trademark} fiberboard. Therefore, an alternative to cane-based Celotex{trademark} fiberboard is needed. Knight-Celotex currently manufactures Celotex{trademark} fiberboard from other cellulosic materials, such as hardwood and softwood. A review of the relevant literature has shown that softwood-based Celotex{trademark} meets all parameters important to the Model 9975 shipping package.
Date: May 27, 2008
Creator: Watkins, R & Jason Varble, J
System: The UNT Digital Library
Enzymatic Ligation Creates Discrete Multi-Nanoparticle Building Blocks for Self-Assembly (open access)

Enzymatic Ligation Creates Discrete Multi-Nanoparticle Building Blocks for Self-Assembly

Enzymatic ligation of discrete nanoparticle?DNA conjugates creates nanoparticle dimer and trimer structures in which the nanoparticles are linked by single-stranded DNA, rather than double-stranded DNA as in previous experiments. Ligation is verified by agarose gel and small-angle X-ray scattering. This capability is utilized in two ways: first to create a new class of multiparticle building blocks for nanoscale self-assembly; second to develop a system which can amplify a population of discrete nanoparticle assemblies.
Date: May 27, 2008
Creator: Claridge, Shelley A.; Mastroianni, Alexander J.; Au, Yeung B.; Liang, Huiyang W.; Micheel, Christine M.; Frechet, Jean M.J. et al.
System: The UNT Digital Library
The mechanism for iron-catalyzed alkene isomerization in solution (open access)

The mechanism for iron-catalyzed alkene isomerization in solution

Here we report nano- through microsecond time-resolved IR experiments of iron-catalyzed alkene isomerization in room-temperature solution. We have monitored the photochemistry of a model system, Fe(CO){sub 4}({eta}{sup 2}-1-hexene), in neat 1-hexene solution. UV-photolysis of the starting material leads to the dissociation of a single CO to form Fe(CO){sub 3}({eta}{sup 2}-1-hexene), in a singlet spin state. This CO loss complex shows a dramatic selectivity to form an allyl hydride, HFe(CO){sub 3}({eta}{sup 3}-C{sub 6}H{sub 11}), via an internal C-H bond-cleavage reaction in 5-25 ns. We find no evidence for the coordination of an alkene molecule from the bath to the CO loss complex, but do observe coordination to the allyl hydride, indicating that it is the key intermediate in the isomerization mechanism. Coordination of the alkene ligand to the allyl hydride leads to the formation of the bis-alkene isomers, Fe(CO){sub 3}({eta}{sup 2}-1-hexene)({eta}{sup 2}-2-hexene) and Fe(CO){sub 3}({eta}{sup 2}-1-hexene){sub 2}. Because of the thermodynamic stability of Fe(CO){sub 3}({eta}{sup 2}-1-hexene)({eta}{sup 2}-2-hexene) over Fe(CO){sub 3}({eta}{sup 2}-1-hexene){sub 2} (ca. 12 kcal/mol), nearly 100% of the alkene population will be 2-alkene. The results presented herein provide the first direct evidence for this mechanism in solution and suggest modifications to the currently accepted mechanism.
Date: May 27, 2008
Creator: Sawyer, Karma R.; Glascoe, Elizabeth A.; Cahoon, James F.; Schlegel, Jacob P. & Harris, Charles B.
System: The UNT Digital Library
Turbulence-Flame Interactions in Type Ia Supernovae (open access)

Turbulence-Flame Interactions in Type Ia Supernovae

The large range of time and length scales involved in type Ia supernovae (SN Ia) requires the use of flame models. As a prelude to exploring various options for flame models, we consider, in this paper, high-resolution three-dimensional simulations of the small-scale dynamics of nuclear flames in the supernova environment in which the details of the flame structure are fully resolved. The range of densities examined, 1 to 8 x 107 g cm-3, spans the transition from the laminar flamelet regime to the distributed burning regime where small scale turbulence disrupts the flame. The use of a low Mach number algorithm facilitates the accurate resolution of the thermal structure of the flame and the inviscid turbulent kinetic energy cascade, while implicitly incorporating kinetic energy dissipation at the grid-scale cutoff. For an assumed background of isotropic Kolmogorov turbulence with an energy characteristic of SN Ia, we find a transition density between 1 and 3 x 107 g cm-3 where the nature of the burning changes ualitatively. By 1 x 107 g cm-3, energy diffusion by conduction and radiation is exceeded, on the flame scale, by turbulent advection. As a result, the effective Lewis Number approaches unity. That is, the flame resembles …
Date: May 27, 2008
Creator: Aspden, Andrew J.; Bell, John B.; Day, Marc S.; Woosley, Stan E. & Zingale, Mike
System: The UNT Digital Library
ATF2 High Availability Power Supplies (open access)

ATF2 High Availability Power Supplies

ATF2 is an accelerator test facility modeled after the final focus beamline envisioned for the ILC. By the end of 2008, KEK plans to commission the ATF2 [1]. SLAC and OCEM collaborated on the design of 38 power systems for beamline magnets. The systems range in output power from 1.5 kW to 6 kW. Since high availability is essential for the success of the ILC, Collaborators employed an N+1 modular approach, allowing for redundancy and the use of a single power module rating. This approach increases the availability of the power systems. Common power modules reduces inventory and eases maintenance. Current stability requirements are as tight as 10 ppm. A novel, SLAC designed 20-bit Ethernet Power Supply Controller provides the required precision current regulation. In this paper, Collaborators present the power system design, the expected reliability, fault immunity features, and the methods for satisfying the control and monitoring challenges. Presented are test results and the status of the power systems.
Date: June 27, 2008
Creator: Bellomo, A; de Lira, C.; Lam, B.; MacNair, D. & White, G.
System: The UNT Digital Library
Bin-Hash Indexing: A Parallel Method for Fast Query Processing (open access)

Bin-Hash Indexing: A Parallel Method for Fast Query Processing

This paper presents a new parallel indexing data structure for answering queries. The index, called Bin-Hash, offers extremely high levels of concurrency, and is therefore well-suited for the emerging commodity of parallel processors, such as multi-cores, cell processors, and general purpose graphics processing units (GPU). The Bin-Hash approach first bins the base data, and then partitions and separately stores the values in each bin as a perfect spatial hash table. To answer a query, we first determine whether or not a record satisfies the query conditions based on the bin boundaries. For the bins with records that can not be resolved, we examine the spatial hash tables. The procedures for examining the bin numbers and the spatial hash tables offer the maximum possible level of concurrency; all records are able to be evaluated by our procedure independently in parallel. Additionally, our Bin-Hash procedures access much smaller amounts of data than similar parallel methods, such as the projection index. This smaller data footprint is critical for certain parallel processors, like GPUs, where memory resources are limited. To demonstrate the effectiveness of Bin-Hash, we implement it on a GPU using the data-parallel programming language CUDA. The concurrency offered by the Bin-Hash index …
Date: June 27, 2008
Creator: Bethel, Edward W.; Gosink, Luke J.; Wu, Kesheng; Bethel, Edward Wes; Owens, John D. & Joy, Kenneth I.
System: The UNT Digital Library
Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein (open access)

Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein

{sup 13}C-based metabolic flux analysis provides valuable information about bacterial physiology. Though many biological processes rely on the synergistic functions of microbial communities, study of individual organisms in a mixed culture using existing flux analysis methods is difficult. Isotopomer-based flux analysis typically relies on hydrolyzed amino acids from a homogeneous biomass. Thus metabolic flux analysis of a given organism in a mixed culture requires its separation from the mixed culture. Swift and efficient cell separation is difficult and a major hurdle for isotopomer-based flux analysis of mixed cultures. Here we demonstrate the use of a single highly-expressed protein to analyze the isotopomer distribution of amino acids from one organism. Using the model organism E. coli expressing a plasmid-borne, his-tagged Green Fluorescent Protein (GFP), we show that induction of GFP does not affect E. coli growth kinetics or the isotopomer distribution in nine key metabolites. Further, the isotopomer labeling patterns of amino acids derived from purified GFP and total cell protein are indistinguishable, indicating that amino acids from a purified protein can be used to infer metabolic fluxes of targeted organisms in a mixed culture. This study provides the foundation to extend isotopomer-based flux analysis to study metabolism of individual strains …
Date: June 27, 2008
Creator: Shaikh, Afshan; Shaikh, Afshan S.; Tang, Yinjie; Mukhopadhyay, Aindrila & Keasling, Jay D.
System: The UNT Digital Library