Chapter 27 -- Breast Cancer Genomics, Section VI, Pathology and Biological Markers of Invasive Breast Cancer (open access)

Chapter 27 -- Breast Cancer Genomics, Section VI, Pathology and Biological Markers of Invasive Breast Cancer

Breast cancer is predominantly a disease of the genome with cancers arising and progressing through accumulation of aberrations that alter the genome - by changing DNA sequence, copy number, and structure in ways that that contribute to diverse aspects of cancer pathophysiology. Classic examples of genomic events that contribute to breast cancer pathophysiology include inherited mutations in BRCA1, BRCA2, TP53, and CHK2 that contribute to the initiation of breast cancer, amplification of ERBB2 (formerly HER2) and mutations of elements of the PI3-kinase pathway that activate aspects of epidermal growth factor receptor (EGFR) signaling and deletion of CDKN2A/B that contributes to cell cycle deregulation and genome instability. It is now apparent that accumulation of these aberrations is a time-dependent process that accelerates with age. Although American women living to an age of 85 have a 1 in 8 chance of developing breast cancer, the incidence of cancer in women younger than 30 years is uncommon. This is consistent with a multistep cancer progression model whereby mutation and selection drive the tumor's development, analogous to traditional Darwinian evolution. In the case of cancer, the driving events are changes in sequence, copy number, and structure of DNA and alterations in chromatin structure or …
Date: June 18, 2009
Creator: Spellman, Paul T.; Heiser, Laura & Gray, Joe W.
System: The UNT Digital Library
Hydrological consequences of global warming (open access)

Hydrological consequences of global warming

The 2007 Intergovernmental Panel for Climate Change indicates there is strong evidence that the atmospheric concentration of carbon dioxide far exceeds the natural range over the last 650,000 years, and this recent warming of the climate system is unequivocal, resulting in more frequent extreme precipitation events, earlier snowmelt runoff, increased winter flood likelihoods, increased and widespread melting of snow and ice, longer and more widespread droughts, and rising sea level. The effects of recent warming has been well documented and climate model projections indicate a range of hydrological impacts with likely to very likely probabilities (67 to 99 percent) of occurring with significant to severe consequences in response to a warmer lower atmosphere with an accelerating hydrologic cycle.
Date: June 1, 2009
Creator: Miller, Norman L.
System: The UNT Digital Library
Model Components of the Certification Framework for Geologic Carbon Sequestration Risk Assessment (open access)

Model Components of the Certification Framework for Geologic Carbon Sequestration Risk Assessment

We have developed a framework for assessing the leakage risk of geologic carbon sequestration sites. This framework, known as the Certification Framework (CF), emphasizes wells and faults as the primary potential leakage conduits. Vulnerable resources are grouped into compartments, and impacts due to leakage are quantified by the leakage flux or concentrations that could potentially occur in compartments under various scenarios. The CF utilizes several model components to simulate leakage scenarios. One model component is a catalog of results of reservoir simulations that can be queried to estimate plume travel distances and times, rather than requiring CF users to run new reservoir simulations for each case. Other model components developed for the CF and described here include fault characterization using fault-population statistics; fault connection probability using fuzzy rules; well-flow modeling with a drift-flux model implemented in TOUGH2; and atmospheric dense-gas dispersion using a mesoscale weather prediction code.
Date: June 1, 2009
Creator: Oldenburg, Curtis M.; Bryant, Steven L.; Nicot, Jean-Philippe; Kumar, Navanit; Zhang, Yingqi; Jordan, Preston et al.
System: The UNT Digital Library
Automated Structure Solution with the PHENIX Suite (open access)

Automated Structure Solution with the PHENIX Suite

Significant time and effort are often required to solve and complete a macromolecular crystal structure. The development of automated computational methods for the analysis, solution and completion of crystallographic structures has the potential to produce minimally biased models in a short time without the need for manual intervention. The PHENIX software suite is a highly automated system for macromolecular structure determination that can rapidly arrive at an initial partial model of a structure without significant human intervention, given moderate resolution and good quality data. This achievement has been made possible by the development of new algorithms for structure determination, maximum-likelihood molecular replacement (PHASER), heavy-atom search (HySS), template and pattern-based automated model-building (RESOLVE, TEXTAL), automated macromolecular refinement (phenix.refine), and iterative model-building, density modification and refinement that can operate at moderate resolution (RESOLVE, AutoBuild). These algorithms are based on a highly integrated and comprehensive set of crystallographic libraries that have been built and made available to the community. The algorithms are tightly linked and made easily accessible to users through the PHENIX Wizards and the PHENIX GUI.
Date: June 9, 2008
Creator: Zwart, Peter H.; Zwart, Peter H.; Afonine, Pavel; Grosse-Kunstleve, Ralf W.; Hung, Li-Wei; Ioerger, Tom R. et al.
System: The UNT Digital Library
Promoting electricity from renewable energy sources -- lessons learned from the EU, U.S. and Japan (open access)

Promoting electricity from renewable energy sources -- lessons learned from the EU, U.S. and Japan

The promotion of electricity generated from Renewable Energy Sources (RES) has recently gained high priority in the energy policy strategies of many countries in response to concerns about global climate change, energy security and other reasons. This chapter compares and contrasts the experience of a number of countries in Europe, states in the US as well as Japan in promoting RES, identifying what appear to be the most successful policy measures. Clearly, a wide range of policy instruments have been tried and are in place in different parts of the world to promote renewable energy technologies. The design and performance of these schemes varies from place to place, requiring further research to determine their effectiveness in delivering the desired results. The main conclusions that can be drawn from the present analysis are: (1) Generally speaking, promotional schemes that are properly designed within a stable framework and offer long-term investment continuity produce better results. Credibility and continuity reduce risks thus leading to lower profit requirements by investors. (2) Despite their significant growth in absolute terms in a number of key markets, the near-term prognosis for renewables is one of modest success if measured in terms of the percentage of the total …
Date: June 1, 2007
Creator: Haas, Reinhard; Meyer, Niels I.; Held, Anne; Finon, Dominique; Lorenzoni, Arturo; Wiser, Ryan et al.
System: The UNT Digital Library
Chapter 4: Geological Carbon Sequestration (open access)

Chapter 4: Geological Carbon Sequestration

Carbon sequestration is the long term isolation of carbon dioxide from the atmosphere through physical, chemical, biological, or engineered processes. The largest potential reservoirs for storing carbon are the deep oceans and geological reservoirs in the earth's upper crust. This chapter focuses on geological sequestration because it appears to be the most promising large-scale approach for the 2050 timeframe. It does not discuss ocean or terrestrial sequestration. In order to achieve substantial GHG reductions, geological storage needs to be deployed at a large scale. For example, 1 Gt C/yr (3.6 Gt CO{sub 2}/yr) abatement, requires carbon capture and storage (CCS) from 600 large pulverized coal plants ({approx}1000 MW each) or 3600 injection projects at the scale of Statoil's Sleipner project. At present, global carbon emissions from coal approximate 2.5 Gt C. However, given reasonable economic and demand growth projections in a business-as-usual context, global coal emissions could account for 9 Gt C. These volumes highlight the need to develop rapidly an understanding of typical crustal response to such large projects, and the magnitude of the effort prompts certain concerns regarding implementation, efficiency, and risk of the enterprise. The key questions of subsurface engineering and surface safety associated with carbon sequestration …
Date: June 14, 2006
Creator: Friedmann, J. & Herzog, H.
System: The UNT Digital Library
Laser Fusion: The First Ten Years 1962-1972 (open access)

Laser Fusion: The First Ten Years 1962-1972

This account of the beginning of the program on laser fusion at Livermore in 1962, and its subsequent development during the decade ending in 1972, was originally prepared as a contribution to the January 1991 symposium 'Achievements in Physics' honoring Professor Keith Brueckner upon his retirement from the University of San Diego at La Jolla. It is a personal recollection of work at Livermore from my vantage point as its scientific leader, and of events elsewhere that I thought significant. This period was one of rapid growth in which the technology of high-power short-pulse lasers needed to drive the implosion of thermonuclear fuel to the temperature and density needed for ignition was developed, and in which the physics of the interaction of intense light with plasmas was explored both theoretically and experimentally.
Date: June 25, 2004
Creator: Kidder, R. E.
System: The UNT Digital Library
Become One In A Million: Partnership Updates -- Million Solar Roofs and Interstate Renewable Energy Council (open access)

Become One In A Million: Partnership Updates -- Million Solar Roofs and Interstate Renewable Energy Council

The Million Solar Roofs Partnership Update is an annual report from all the Partnership and Partners who participate in the Million Solar Roofs Initiative.
Date: June 1, 2004
Creator: unknown
System: The UNT Digital Library
Biomass Cofiring in Coal-Fired Boilers (open access)

Biomass Cofiring in Coal-Fired Boilers

Cofiring biomass-for example, forestry residues such as wood chips-with coal in existing boilers is one of the easiest biomass technologies to implement in a federal facility. The current practice is to substitute biomass for up to 20% of the coal in the boiler. Cofiring has many benefits: it helps to reduce fuel costs as well as the use of landfills, and it curbs emissions of sulfur oxide, nitrogen oxide, and the greenhouse gases associated with burning fossil fuels. This Federal Technology Alert was prepared by the Department of Energy's Federal Energy Management Program to give federal facility managers the information they need to decide whether they should pursue biomass cofiring at their facilities.
Date: June 1, 2004
Creator: unknown
System: The UNT Digital Library
Procurement of Architectural and Engineering Services for Sustainable Buildings: A Guide for Federal Project Managers (open access)

Procurement of Architectural and Engineering Services for Sustainable Buildings: A Guide for Federal Project Managers

This guide was prepared to be a resource for federal construction project managers and others who want to integrate the principles of sustainable design into the procurement of professional building design and consulting services. To economize on energy costs and improve the safety, comfort, and health of building occupants, building design teams can incorporate daylighting, energy efficiency, renewable energy, and passive solar design into all projects in which these elements are technically and economically feasible. The information presented here will help project leaders begin the process and manage the inclusion of sustainable design in the procurement process. The section on establishing selection criteria contains key elements to consider before selecting an architectural and engineering (A/E) firm. The section on preparing the statement of work discusses the broad spectrum of sustainable design services that an A/E firm can provide. Several helpful checklists are included.
Date: June 1, 2004
Creator: unknown
System: The UNT Digital Library
Solar Decathlon 2002: The Event in Review (open access)

Solar Decathlon 2002: The Event in Review

This book describes the first Solar Decathlon, a competition for college and university students, which took place on the National Mall in fall 2002. Student teams competed to design, build, and operate the most attractive, energy-efficient house that used only solar energy. In addition to the competition, the Solar Decathlon was also a public event. The book describes the events on the Mall, including technical details about the ten contests that comprised the competition and descriptions of the public's and the media's responses to the event. The book also provides information about the student teams' activities in the year and a half before they arrived to compete on the Mall.
Date: June 1, 2004
Creator: Eastment, M.; Hayter, S.; Nahan, R.; Stafford, B.; Warner, C.; Hancock, E. et al.
System: The UNT Digital Library
Energy Savers Tips on Saving Energy& Money at Home (open access)

Energy Savers Tips on Saving Energy& Money at Home

Provides consumers with home energy and money savings tips such as insulation, weatherization, heating, cooling, water heating, energy efficient windows, landscaping, lighting, and energy efficient appliances
Date: June 1, 2003
Creator: unknown
System: The UNT Digital Library
Energy Design Guidelines for High Performance Schools: Hot and Dry Climates (Revision) (open access)

Energy Design Guidelines for High Performance Schools: Hot and Dry Climates (Revision)

School districts around the country are finding that the smart energy choices can help them save money and provide healthier, more effective learning environments. By incorporating energy improvements into their construction or renovation plans, schools can significantly reduce energy consumption and costs. These savings can be redirected to educational needs such as additional teachers, instructional materials, or new computers. These design guidelines outline high performance principles for the new or retrofit design of your K-12 school. By incorporating these principles, you can create and exemplary building that is both energy and resource efficient.
Date: June 1, 2002
Creator: unknown
System: The UNT Digital Library
Energy Design Guidelines for High Performance Schools: Temperate and Mixed Climates (open access)

Energy Design Guidelines for High Performance Schools: Temperate and Mixed Climates

School districts around the country are finding that the smart energy choices can help them save money and provide healthier, more effective learning environments. By incorporating energy improvements into their construction or renovation plans, schools can significantly reduce energy consumption and costs. These savings can be redirected to educational needs such as additional teachers, instructional materials, or new computers. These design guidelines outline high performance principles for the new or retrofit design of your K-12 school. By incorporating these principles, you can create and exemplary building that is both energy and resource efficient.
Date: June 1, 2002
Creator: unknown
System: The UNT Digital Library
Highlighting High Performance: The Solar Energy Research Facility, Golden, Colorado (open access)

Highlighting High Performance: The Solar Energy Research Facility, Golden, Colorado

The National Renewable Energy Laboratory's Solar Energy Research Facility in Golden, Colorado, uses a stair-step configuration to allow daylight and heat into the office areas, while the laboratories in the back of the building are in a more controlled environment where tight levels of ventilation, humidity, temperature, and light are critical. A unique mechanical system makes the most of the natural environment and the building's design to efficiently heat and cool the building at an annual utility bill savings of almost $200,000 per year.
Date: June 26, 2001
Creator: Torcellini, P. & Epstein, K.
System: The UNT Digital Library
PRODUCTION CONSIDERATIONS FOR THE CLASSICAL PET NUCLIDES. (open access)

PRODUCTION CONSIDERATIONS FOR THE CLASSICAL PET NUCLIDES.

Nuclear Medicine is the specialty of medical imaging, which utilizes a variety of radionuclides incorporated into specific compounds for diagnostic imaging and therapeutic applications. During recent years, research efforts associated with this discipline have concentrated on the decay characteristics of particular radionuclides and the design of unique radiolabeled tracers necessary to achieve time-dependent molecular images. The specialty is expanding with specific Positron emission tomography (PET) and SPECT radiopharmaceuticals allowing for an extension from functional process imaging in tissue to pathologic processes and nuclide directed treatments. PET is an example of a technique that has been shown to yield the physiologic information necessary for clinical oncology diagnoses based upon altered tissue metabolism. Most PET drugs are currently produced using a cyclotron at locations that are in close proximity to the hospital or academic center at which the radiopharmaceutical will be administered. In November 1997, a law was enacted called the Food and Drug Administration Modernization Act of 1997 which directed the Food and Drug Administration (FDA) to establish appropriate procedures for the approval of PET drugs in accordance with section 505 of the Federal Food, Drug, and Cosmetic Act and to establish current good manufacturing practice requirements for such drugs. At …
Date: June 25, 2001
Creator: Finn, R. & Schlyer, D.
System: The UNT Digital Library
Technical and Economic Feasibility Assessment of a Brightfield Photovoltaic Power Plant at Miramar Landfill: Final Report (open access)

Technical and Economic Feasibility Assessment of a Brightfield Photovoltaic Power Plant at Miramar Landfill: Final Report

In partnership with the City of San Diego, the U.S. Department of Energy funded a study to determine the feasibility of developing up to a 1 MW Brightfield on a landfill.
Date: June 21, 2001
Creator: Millennium Energy LLC
System: The UNT Digital Library
Highlighting High Performance: National Renewable Energy Laboratory's Visitors Center, Golden, Colorado (open access)

Highlighting High Performance: National Renewable Energy Laboratory's Visitors Center, Golden, Colorado

The National Renewable Energy Laboratory Visitors Center, also known as the Dan Schaefer Federal Building, is a high-performance building located in Golden, Colorado. The 6,400-square-foot building incorporates passive solar heating, energy-efficient lighting, an evaporative cooling system, and other technologies to minimize energy costs and environmental impact. The Visitors Center displays a variety of interactive exhibits on energy efficiency and renewable energy, and the building includes an auditorium, a public reading room, and office space.
Date: June 19, 2001
Creator: Burgert, S.
System: The UNT Digital Library
Mid-Atlantic Region Consumer's Guide to Buying a Solar Electric System - Revision (open access)

Mid-Atlantic Region Consumer's Guide to Buying a Solar Electric System - Revision

Consumers in Pennsylvania, Virginia, Delaware, Maryland, the District of Columbia, West Virginia, and New Jersey are showing increased interest in solar electric systems for their homes and businesses. This booklet provides basic information about buying a PV system. Photovoltaic (PV) systems are reliable, pollution free, and use a renewable source of energy--the sun. A PV system can be a substantial investment and careful planning will help ensure that you make the right decisions.
Date: June 19, 2001
Creator: Administration, Maryland Energy
System: The UNT Digital Library
Solar Electricity for Commercial Applications (open access)

Solar Electricity for Commercial Applications

A brochure describing the benefits of using solar electricity in commercial buildings.
Date: June 19, 2001
Creator: Society, American Solar Energy
System: The UNT Digital Library
Solar Electricity for Your Home (open access)

Solar Electricity for Your Home

A brochure describing the benefits of using solar electricity in your home.
Date: June 19, 2001
Creator: Society, American Solar Energy
System: The UNT Digital Library
Solar Heated Pools for Your Commercial Property (open access)

Solar Heated Pools for Your Commercial Property

A brochure describing the energy-saving and cost-saving benefits of using solar water heating in commercial swimming pools.
Date: June 19, 2001
Creator: Society, American Solar Energy
System: The UNT Digital Library
Solar Heated Pools for Your Home (open access)

Solar Heated Pools for Your Home

A brochure describing the benefits of using solar to heat your home swimming pool.
Date: June 19, 2001
Creator: Society, American Solar Energy
System: The UNT Digital Library
Solar Hot Water for Your Home (open access)

Solar Hot Water for Your Home

A brochure describing the cost-saving and energy-saving benefits of using solar heated water in your home.
Date: June 19, 2001
Creator: Society, American Solar Energy
System: The UNT Digital Library