FY 2007 LDRD Director's R&D Progress SummaryProposal Title: Developing a Science Base for Fuel Reprocessing Separations in the Global Nuclear Energy Program (open access)

FY 2007 LDRD Director's R&D Progress SummaryProposal Title: Developing a Science Base for Fuel Reprocessing Separations in the Global Nuclear Energy Program

This work is aimed at developing an experimentally validated computational capability for understanding the complex processes governing the performance of solvent extraction devices used for separations in nuclear fuel reprocessing. These applications pose a grand challenge due to the combination of complicating factors in a three-dimensional, turbulent, reactive, multicomponent, multiphase/interface fluid flow system. The currently limited process simulation and scale-up capabilities provides uncertainty in the ability to select and design the separations technology for the demonstration plan of the Global Nuclear Energy Partnership (GNEP) program. We anticipate the development of science-based models for technology development and design. This project will position ORNL to address the emerging opportunity by creating an expandable process model validated experimentally. This project has three major thrusts, namely, a prototype experimental station, a continuum modeling and simulation effort, and molecular modeling and kinetics support. Excellent progress has been made in corresponding activities in this first year in: (1) defining, assembling, and operating a relevant prototype system for model validation; (2) establishing a mathematical model for fluid flow and transport; (3) deploying sub-scale molecular modeling.
Date: January 1, 2011
Creator: de Almeida, Valmor F; Tsouris, Costas; Birdwell Jr, Joseph F; D'Azevedo, Ed F; Jubin, Robert Thomas; DePaoli, David W et al.
Object Type: Report
System: The UNT Digital Library
300 Area D4 Project Fiscal Year 2007 Building Completion Report (open access)

300 Area D4 Project Fiscal Year 2007 Building Completion Report

This report documents the deactivation, decontamination, decommissioning, and demolition (D4) of twenty buildings in the 300 Area of the Hanford Site. The D4 of these facilties included characterization, engineering, removal of hazardous and radiologically contaminated materials, equipment removal, utility disconnection, deactivation, decontamination, demolition of the structure, and stabilization or removal of the remaining slab and foundation, as appropriate.
Date: January 15, 2009
Creator: Westberg, R. A.
Object Type: Report
System: The UNT Digital Library
Idaho Watershed Habitat Restoration Lemhi, Final Annual Report FY2007. (open access)

Idaho Watershed Habitat Restoration Lemhi, Final Annual Report FY2007.

None
Date: November 6, 2008
Creator: Branbury, Allen
Object Type: Report
System: The UNT Digital Library
MATRIX 2 RESULTS OF THE FY07 ENHANCED DOE HIGH-LEVEL WASTE MELTER THROUGHPUT STUDIES AT SRNL (open access)

MATRIX 2 RESULTS OF THE FY07 ENHANCED DOE HIGH-LEVEL WASTE MELTER THROUGHPUT STUDIES AT SRNL

High-level waste (HLW) throughput (i.e., the amount of waste processed per unit time) is a function of two critical parameters: waste loading (WL) and melt rate. For the Waste Treatment and Immobilization Plant (WTP) at the Hanford Site and the Defense Waste Processing Facility (DWPF) at the Savannah River Site (SRS), increasing HLW throughput would significantly reduce the overall mission life cycle costs for the Department of Energy (DOE). The objective of this study was to generate supplemental validation data that could be used to determine the applicability of the current liquidus temperature (TL) model to expanded DWPF glass composition regions of interest based on higher WLs. Two specific flowsheets were used in this study to provide such insight: (1) Higher WL glasses (45 and 50%) based on future sludge batches that have (and have not) undergone the Al-dissolution process. (2) Coupled operations supported by the Salt Waste Processing Facility (SWPF), which increase the TiO{sub 2} concentration in glass to greater than 2 wt%. Glasses were also selected to address technical issues associated with Al{sub 2}O{sub 3} solubility, nepheline formation, and homogeneity issues for coupled operations. A test matrix of 28 glass compositions was developed to provide insight into these …
Date: October 23, 2008
Creator: Raszewski, F; Tommy Edwards, T & David Peeler, D
Object Type: Report
System: The UNT Digital Library
MATRIX 1 RESULTS OF THE FY07 ENHANCED DOE HIGH-LEVEL WASTE MELTER THROUGHPUT STUDIES AT SRNL (open access)

MATRIX 1 RESULTS OF THE FY07 ENHANCED DOE HIGH-LEVEL WASTE MELTER THROUGHPUT STUDIES AT SRNL

High-level waste (HLW) throughput (i.e., the amount of waste processed per unit time) is a function of two critical parameters: waste loading (WL) and melt rate. For the Waste Treatment and Immobilization Plant (WTP) at the Hanford Site and the Defense Waste Processing Facility (DWPF) at the Savannah River Site (SRS), increasing HLW throughput would significantly reduce the overall mission life cycle costs for the Department of Energy (DOE). It has been proposed that a team of glass formulation and processing experts at the Pacific Northwest National Laboratory (PNNL), Savannah River National Laboratory (SRNL), and Vitreous State Laboratory (VSL) at Catholic University of America develop a systematic approach to increase HLW throughput (by increasing WL with minimal or positive impacts on melt rate). Programmatically, this task is aimed at proof-of-principle testing and the development of tools to improve waste loading and melt rate, which will lead to higher waste throughput. The following four specific tasks have been proposed to meet this programmatic objective: (1) Integration and Oversight, (2) Crystal Accumulation Modeling (led by PNNL)/Higher Waste Loading Glasses (led by SRNL), (3) Melt Rate Evaluation and Modeling, and (4) Melter Scale Demonstrations. The details of these tasks can be found in …
Date: September 23, 2008
Creator: Raszewski, F; Tommy Edwards, T & David Peeler, D
Object Type: Report
System: The UNT Digital Library
The Sandia MEMS passive shock sensor : FY07 maturation activities. (open access)

The Sandia MEMS passive shock sensor : FY07 maturation activities.

This report describes activities conducted in FY07 to mature the MEMS passive shock sensor. The first chapter of the report provides motivation and background on activities that are described in detail in later chapters. The second chapter discusses concepts that are important for integrating the MEMS passive shock sensor into a system. Following these two introductory chapters, the report details modeling and design efforts, packaging, failure analysis and testing and validation. At the end of FY07, the MEMS passive shock sensor was at TRL 4.
Date: August 1, 2008
Creator: Houston, Jack E.; Blecke, Jill; Mitchell, John Anthony; Wittwer, Jonathan W.; Crowson, Douglas A.; Clemens, Rebecca C. et al.
Object Type: Report
System: The UNT Digital Library
ASGRAD FY07 Annual Report (open access)

ASGRAD FY07 Annual Report

This is the annual project report for the ASGRAD project - Amorphous Semiconductors for Gamma Radiation Detection. We describe progress in the development of new materials for portable, room temperature, gammaradiation detection at Pacific Northwest National Laboratory. High Z, high resistivity, amorphous semiconductors are being designed for use as solid-state detectors at near ambient temperatures; their principles of operation are analogous to single-crystal semiconducting detectors. Compared to single crystals, amorphous semiconductors have the advantages of rapid, cost-effective, bulk-fabrication; nearnet-shape fabrication of complicated geometries; compositional flexibility; and greater electronic property control. The main disadvantage is reduced-charge carrier mobility. The focus of this project is to develop optimized amorphous semiconductor materials for gamma detection applications that leverage their material advantages while mitigating their limitations. During the second year of this project, several important milestones were accomplished. Major accomplishments were: (1) Significant processing - property and composition - property correlations were determined for Cd-Ge-As glasses; (2) Radiation response testing was successfully demonstrated on three different amorphous semiconductor materials (Cd-Ge-As, As-Se, and As-Se-Te systems) at ambient and near ambient temperatures; (3) Advanced, enabling Schottky contacts were developed for Cd-Ge-As compounds, this will allow these materials to perform at ambient temperatures; and (4) The collaborative …
Date: May 6, 2008
Creator: Johnson, Bradley R.; Riley, Brian J.; Crum, Jarrod V.; Sundaram, S. K.; Henager, Charles H.; Seifert, Carolyn E. et al.
Object Type: Report
System: The UNT Digital Library
Fiscal Year 2007 Phased Construction Completion Report for the Zone 2 Soils, Slabs, and Subsurface Structures at East Tennessee Technology Park, Oak Ridge, Tennessee (open access)

Fiscal Year 2007 Phased Construction Completion Report for the Zone 2 Soils, Slabs, and Subsurface Structures at East Tennessee Technology Park, Oak Ridge, Tennessee

The purpose of this Phased Construction Completion Report (PCCR) is to present the fiscal year (FY) 2007 results of characterization activities and recommended remedial actions (RAs) for 11 exposure units (EUs) in Zone 2 (Z2-01, Z2-03, Z2-08, Z2-23, Z2-24, Z2-28, Z2-34, Z2-37, Z2-41, Z2-43, and Z2-44) at the East Tennessee Technology Park (ETTP), which is located in the northwest corner of the U.S. Department of Energy (DOE) Oak Ridge Reservation in Oak Ridge, Tennessee (Fig. 1). ETTP encompasses a total land area of approximately 5000 acres that has been subdivided into three zones--Zone 1 ({approx}1400 acres), Zone 2 ({approx}800 acres), and the Boundary Area ({approx}2800 acres). Zone 2, which encompasses the highly industrialized portion of ETTP shown in Fig. 1, consists of all formerly secured areas of the facility, including the large processing buildings and direct support facilities; experimental laboratories and chemical and materials handling facilities; materials storage and waste disposal facilities; secure document records libraries; and shipping and receiving warehouses. The Zone 2 Record of Decision for Soil, Buried Waste, and Subsurface Structure Actions in Zone 2, East Tennessee Technology Park, Oak Ridge, Tennessee (DOE 2005) (Zone 2 ROD) specifies the future end use for Zone 2 acreage as …
Date: March 1, 2008
Creator: RSI
Object Type: Report
System: The UNT Digital Library
Freedom car and vehicle technologies heavy vehicle program : FY 2007 benefits analysis, methodology and results -- final report. (open access)

Freedom car and vehicle technologies heavy vehicle program : FY 2007 benefits analysis, methodology and results -- final report.

This report describes the approach to estimating the benefits and analysis results for the Heavy Vehicle Technologies activities of the FreedomCar and Vehicle Technologies (FCVT) Program of EERE. The scope of the effort includes: (1) Characterizing baseline and advanced technology vehicles for Class 3-6 and Class 7 and 8 trucks, (2) Identifying technology goals associated with the DOE EERE programs, (3) Estimating the market potential of technologies that improve fuel efficiency and/or use alternative fuels, (4) Determining the petroleum and greenhouse gas emissions reductions associated with the advanced technologies. In FY 05 the Heavy Vehicles program activity expanded its technical involvement to more broadly address various sources of energy loss as compared to focusing more narrowly on engine efficiency and alternative fuels. This broadening of focus has continued in subsequent activities. These changes are the result of a planning effort that occurred during FY 04 and 05. (Ref. 1) This narrative describes characteristics of the heavy truck market as they relate to the analysis, a description of the analysis methodology (including a discussion of the models used to estimate market potential and benefits), and a presentation of the benefits estimated as a result of the adoption of the advanced technologies. …
Date: February 29, 2008
Creator: SIngh, M.; Systems, Energy & Engineering, TA
Object Type: Report
System: The UNT Digital Library
FY07 LDRD Final Report Comparative Analysis of Genome Composition with Respect to Genotype-to-Phenotype Mapping and Metabolic Capability (open access)

FY07 LDRD Final Report Comparative Analysis of Genome Composition with Respect to Genotype-to-Phenotype Mapping and Metabolic Capability

None
Date: February 11, 2008
Creator: D'haeseleer, P
Object Type: Report
System: The UNT Digital Library
FY07 LDRD Final Report Optical properties as a real-time in situ materials diagnostic at extreme conditions (open access)

FY07 LDRD Final Report Optical properties as a real-time in situ materials diagnostic at extreme conditions

None
Date: February 10, 2008
Creator: Nguyen, J H; Patterson, J R; Holmes, N C; Benedict, L X & Klepeis, J E
Object Type: Report
System: The UNT Digital Library
FY07 LDRD Final Report Catalyzing the Adoption of Software Components (open access)

FY07 LDRD Final Report Catalyzing the Adoption of Software Components

None
Date: February 7, 2008
Creator: Epperly, T W; Kumfert, G K; Panas, T & Quinlan, D J
Object Type: Report
System: The UNT Digital Library
FY07 LDRD Final Report Development of Hot, LTE-tunable Radiation Sources for Material Science Studies (open access)

FY07 LDRD Final Report Development of Hot, LTE-tunable Radiation Sources for Material Science Studies

None
Date: February 7, 2008
Creator: Schneider, M
Object Type: Report
System: The UNT Digital Library
FY07 Engineering Research and Technology Report (open access)

FY07 Engineering Research and Technology Report

This report summarizes the core research, development, and technology accomplishments in Lawrence Livermore National Laboratory's Engineering Directorate for FY2007. These efforts exemplify Engineering's more than 50-year history of developing and applying the technologies needed to support the Laboratory's national security missions. A partner in every major program and project at the Laboratory throughout its existence, Engineering has prepared for this role with a skilled workforce and technical resources developed through both internal and external venues. These accomplishments embody Engineering's mission: 'Enable program success today and ensure the Laboratory's vitality tomorrow'. Engineering's mission is carried out through research and technology. Research is the vehicle for creating competencies that are cutting-edge, or require discovery-class groundwork to be fully understood. The technology efforts are discipline-oriented, preparing research breakthroughs for broader application to a variety of Laboratory needs. The term commonly used for technology-based projects is 'reduction to practice'. This report combines the work in research and technology into one volume, organized into thematic technical areas: Engineering Modeling and Simulation; Measurement Technologies; Micro/Nano-Devices and Structures; Engineering Systems for Knowledge and Inference; and Energy Manipulation.
Date: February 6, 2008
Creator: Minichino, C
Object Type: Report
System: The UNT Digital Library
FY07 LDRD Final Report A Fracture Mechanics and Tribology Approach to Understanding Subsurface Damage on Fused Silica during Grinding and Polishing (open access)

FY07 LDRD Final Report A Fracture Mechanics and Tribology Approach to Understanding Subsurface Damage on Fused Silica during Grinding and Polishing

The objective of this work is to develop a solid scientific understanding of the creation and characteristics of surface fractures formed during the grinding and polishing of brittle materials, specifically glass. In this study, we have experimentally characterized the morphology, number density, and depth distribution of various surface cracks as a function of various grinding and polishing processes (blanchard, fixed abrasive grinding, loose abrasive, pitch polishing and pad polishing). Also, the effects of load, abrasive particle (size, distribution, foreign particles, geometry, velocity), and lap material (pitch, pad) were examined. The resulting data were evaluated in terms of indentation fracture mechanics and tribological interactions (science of interacting surfaces) leading to several models to explain crack distribution behavior of ground surfaces and to explain the characteristics of scratches formed during polishing. This project has greatly advanced the scientific knowledge of microscopic mechanical damage occurring during grinding and polishing and has been of general interest. This knowledge-base has also enabled the design and optimization of surface finishing processes to create optical surfaces with far superior laser damage resistance. There are five major areas of scientific progress as a result of this LDRD. They are listed in Figure 1 and described briefly in this …
Date: February 5, 2008
Creator: Suratwala, T I; Miller, P E; Menapace, J A; Wong, L L; Steele, R A; Feit, M D et al.
Object Type: Report
System: The UNT Digital Library
200-BP-1 Prototype Hanford Barrier Annual Monitoring Report for Fiscal Years 2005 Through 2007 (open access)

200-BP-1 Prototype Hanford Barrier Annual Monitoring Report for Fiscal Years 2005 Through 2007

A prototype Hanford barrier was deployed over the 216-B-57 Crib at the Hanford Site in 1994 to prevent percolation through the underlying waste and to minimize spreading of buried contaminants. This barrier is being monitored to evaluate physical and hydrologic performance at the field scale. This report summarizes data collected during the period FY 2005 through FY 2007. In FY 2007, monitoring of the prototype Hanford barrier focused on barrier stability, vegetative cover, evidence of plant and animal intrusion, and the main components of the water balance, including precipitation, runoff, storage, drainage, and deep percolation. Owing to a hiatus in funding in FY 2005 through 2006, data collected were limited to automated measurements of the water-balance components. For the reporting period (October 2004 through September 2007) precipitation amount and distribution were close to normal. The cumulative amount of water received from October 1994 through September 2007 was 3043.45 mm on the northern half of the barrier, which is the formerly irrigated treatment, and 2370.58 mm on the southern, non-irrigated treatments. Water storage continued to show a cyclic pattern, increasing in the winter and declining in the spring and summer to a lower limit of around 100 mm in response to …
Date: February 1, 2008
Creator: Ward, Andy L.; Link, Steven O.; Strickland, Christopher E.; Draper, Kathryn E. & Clayton, Ray E.
Object Type: Report
System: The UNT Digital Library
Wind Powering America FY07 Activities Summary (open access)

Wind Powering America FY07 Activities Summary

The Wind Powering America FY07 Activities Summary reflects the accomplishments of our state wind working groups, our programs at the National Renewable Energy Laboratory, and our partner organizations. The national WPA team remains a leading force for moving wind energy forward in the United States. WPA continues to work with its national, regional, and state partners to communicate the opportunities and benefits of wind energy to a diverse set of stakeholders. WPA now has 30 state wind working groups (welcoming Georgia and Wisconsin in 2007) that form strategic alliances to communicate wind's benefits to the state stakeholders. More than 140 members of national and state public and private sector organizations from 39 U.S. states and Canada attended the 6th Annual WPA All-States Summit in Los Angeles in June. WPA's emphasis remains on the rural agricultural sector, which stands to reap the significant economic development benefits of wind energy development. Additionally, WPA continues its program of outreach, education, and technical assistance to Native American communities, public power entities, and regulatory and legislative bodies.
Date: February 1, 2008
Creator: unknown
Object Type: Report
System: The UNT Digital Library
T Tank Farm Interim Surface Barrier Demonstration -- Vadose Zone Monitoring FY07 Report (open access)

T Tank Farm Interim Surface Barrier Demonstration -- Vadose Zone Monitoring FY07 Report

CH2M HILL Hanford Group, Inc. is currently in the process of constructing a temporary surface barrier over a portion of the T Tank Farm as part of the T farm Interim Surface Barrier Demonstration Project. The surface barrier is designed to prevent the infiltration of precipitation into the contaminated soil zone created by the Tank T-106 leak and minimize movement of the contamination. As part of the demonstration effort, vadose zone moisture monitoring is being performed to assess the effectiveness of the barrier at reducing soil moisture. A solar-powered and remotely-controlled system was installed to continuously monitor soil water conditions in four instrument nests (i.e., A, B, C, and D) and the site meteorological condition. Each instrument nest was composed of a capacitance probe with multiple sensors, multiple heat-dissipation units, a neutron probe access tube and a datalogger. Nests A and B also contained a drain gauge each. The principle variables monitored for this purpose are soil-water content, soil-water pressure, and soil-water flux. In addition to these, soil temperature, precipitation, and air temperature are measured. Data from each of the dataloggers were transmitted remotely to the receiving computer. The neutron probe access tube was used to perform quarterly manual measurements …
Date: January 11, 2008
Creator: Zhang, Z. F.; Strickland, Christopher E.; Keller, Jason M.; Wittreich, Curtis D. & Sydnor, Harold A.
Object Type: Report
System: The UNT Digital Library
Annual Hanford Seismic Report for Fiscal Year 2007 (open access)

Annual Hanford Seismic Report for Fiscal Year 2007

This annual report documents the locations, magnitudes, and geologic interpretations of earthquakes recorded for the Hanford monitoring region of south-central Washington in fiscal year 2007 (October 2006 through September 2007). The report provides summaries of seismic events recorded during the first three quarters of fiscal year 2007 and contains a more comprehensive discussion of seismic events for the fourth quarter of the fiscal year.
Date: December 27, 2007
Creator: Rohay, Alan C.; Sweeney, Mark D.; Hartshorn, Donald C.; Clayton, Ray E. & Devary, Joseph L.
Object Type: Report
System: The UNT Digital Library
FY07 Final Report for Calibration Systems (open access)

FY07 Final Report for Calibration Systems

Remote infrared (IR) sensing provides a valuable method for detection and identification of materials associated with nuclear proliferation. Current challenges for remote sensors include minimizing the size, mass, and power requirements for cheaper, smaller, and more deployable instruments without affecting the measurement performance. One area that is often overlooked is sensor calibration design that is optimized to minimize the cost, size, weight, and power of the payload. Yet, an on-board calibration system is essential to account for changes in the detector response once the instrument has been removed from the laboratory. The Calibration Systems project at Pacific Northwest National Laboratory (PNNL) is aimed towards developing and demonstrating compact quantum cascade (QC) laser-based calibration systems for infrared sensor systems in order to provide both a spectral and radiometric calibration while minimizing the impact on the instrument payload. In FY05, PNNL demonstrated a multi-level radiance scheme that provides six radiance levels for an enhanced linearity check compared to the currently accepted two-point scheme. PNNL began testing the repeatability of this scheme using a cryogenically cooled, single-mode quantum cascade laser (QCL). A cyclic variation in the power was observed that was attributed to the thermal cycling of the laser's dewar. In FY06, PNNL …
Date: December 1, 2007
Creator: Myers, Tanya L.; Broocks, Bryan T.; Cannon, Bret D. & Ho, Nicolas
Object Type: Report
System: The UNT Digital Library
SYNTHESIS OF METAL HYDRIDES BY MECHANICAL ALLOYING IN AN ATTRITOR MILL: FY07 STATUS REPORT (open access)

SYNTHESIS OF METAL HYDRIDES BY MECHANICAL ALLOYING IN AN ATTRITOR MILL: FY07 STATUS REPORT

The objective of this task was to demonstrate that metal hydrides could be produced by mechanical alloying in the quantities needed to support the tritium production facilities at the Savannah River Site. The objective for the FY07 portion of this task was to demonstrate the production of Zr-Fe getter materials by mechanical alloying and begin to optimize the milling parameters. Three starting compositions (ratios of elemental Zr and Fe powders) were selected and attritor milled under argon for times of 8 to 60 hours. Hexane and liquid nitrogen were used as process control agents. In general, milling times of at least 24 hours were required to form the desired Zr{sub 2}Fe and Zr{sub 3}Fe phases, although a considerable amount of unalloyed Zr and Fe remained. Milling in liquid nitrogen does not appear to provide any advantages over milling in hexane, particularly due to the formation of ZrN after longer milling times. Carbides of Zr formed during some of the milling experiments in hexane. Formation of carbides during milling appears to be much less of an issue than formation of nitrides, although some of the phases that were not able to be identified in the XRD results may also be carbides. …
Date: November 8, 2007
Creator: Fox, K
Object Type: Report
System: The UNT Digital Library
Fault Geomechanics and Carbon Dioxide Leakage Applied to Geological Storage: FY07 Quarterly and Summary Reports (open access)

Fault Geomechanics and Carbon Dioxide Leakage Applied to Geological Storage: FY07 Quarterly and Summary Reports

Safe and permanent storage of carbon dioxide in geologic reservoirs is critical to geologic sequestration. The objective of this study is to quantify the conditions under which a general (simulated) fault network and a specific (field case) fault network will fail and leak carbon dioxide out of a reservoir. Faults present a potential fast-path for CO{sub 2} leakage from reservoirs to the surface. They also represent potential induced seismicity hazards. It is important to have improved quantitative understandings of the processes that trigger activity on faults and the risks they present. Fortunately, the conditions under which leakage along faults is induced can be predicted and quantified given the fault geometry, reservoir pressure, an in-situ stress tensor. We proposed to expand the current capabilities of fault threshold characterization and apply that capability to a site where is CO{sub 2} injection is active or planned. Specifically, we proposed to use a combination of discrete/explicit and continuum/implicit codes to provide constrain the conditions of fault failure. After minor enhancements of LLNL's existing codes (e.g., LDEC), we would create a 3D synthetic model of a common configuration (e.g., a faulted dome). During these steps, we will identify a field site where the necessary information …
Date: November 2, 2007
Creator: Friedmann, S. J. & Morris, J.
Object Type: Report
System: The UNT Digital Library
FY2007 NREL Energy Storage R&D Progress Report (open access)

FY2007 NREL Energy Storage R&D Progress Report

The National Renewable Energy Laboratory is engaged in research and development activities to support achieving targets and objectives set by the Energy Storage Program at the Office of FreedomCAR and Vehicle Technology in the U.S. Department of Energy. These activities include: 1. supporting the Battery Technology Development Program with battery thermal characterization and modeling and with energy storage system simulations and analysis; 2. supporting the Applied Research Program by developing thermal models to address abuse of Li-Ion batteries; and 3. supporting the Focused Long-Term Research Program by investigating improved Li-Ion battery electrode materials. This report summarizes the results of NREL energy storage activities in FY07.
Date: November 1, 2007
Creator: Pesaran, A.
Object Type: Report
System: The UNT Digital Library
Biosecurity Techbase FY07 Final Report (open access)

Biosecurity Techbase FY07 Final Report

This tech base award has close links with the Viral Identification Characterization Initiative (VICI) ER LDRD. The tech base extends developed code to enable a capability for biodefense, biosurveillance, and clinical diagnostics. The code enables the design of signatures to detect and discover viruses, without relying on prior assumptions as to the species of virus present. This approach for primer and signature design contrasts with more traditional PCR approaches, in which a major weakness is the unlikelihood of viral discovery or detection of unanticipated species. There were three crucial areas of the project that were not research and development, so could not be funded under the ER LDRD, but were a reduction to practice of the existing VICI algorithm that were necessary for the success of overall computational project goals. These areas, funded by the 2007 Tech Base award, were: (1) improvement of the code developed under the VICI LDRD by incorporating T{sub m} and free energy predictions using Unafold; (2) porting of code developed on the kpath Sun Solaris cluster to the Yana and Zeus LC machines; and (3) application of that code to perform large numbers of simulations to determine parameter effects.
Date: October 22, 2007
Creator: Gardner, S N & Williams, P L
Object Type: Report
System: The UNT Digital Library