Experimental results are reported from two measurementtechniques (semiconductor switching and electro-optic sampling) thatallow temporal characterization of electron bunches produced by alaser-driven plasma-based accelerator. As femtosecond electron bunchesexit the plasma-vacuum interface, coherent transition radiation (at THzfrequencies) is emitted. Measuring the properties of this radiationallows characterization of the electron bunches. Theoretical work on theemission mechanism is represented, including a model that calculates theTHz waveform from a given bunch profile. It is found that the spectrum ofthe THz pulse is coherent up to the 200 mu m thick crystal (ZnTe)detection limit of 4 THz, which corresponds to the production of sub-50fs (root-mean-square) electron bunch structure. The measurementsdemonstrate both the shot-to-shot stability of bunch parameters that arecritical to THz emission (such as total charge and bunch length), as wellas femtosecond synchrotron between bunch, THz pulse, and laserbeam.

Mo/Si multilayer coatings reflecting at 131 {angstrom} were deposited successfully on the AIA primary and secondary flight mirrors and on two coating witness Si wafers, on November 16, 2005, at LLNL. All coatings were characterized by means of EUV reflectance measurements at beamline 6.3.2 of the Advanced Light Source (ALS) synchrotron at LBNL, and were found to be well within specifications.

What is the best description that we can construct of athermodynamic system that is not in equilibrium, given only one, or afew, extra parameters over and above those needed for a description ofthe same system at equilibrium? Here, we argue the most appropriateadditional parameter is the non-equilibrium entropy of the system, andthat we should not attempt to estimate the probability distribution ofthe system, but rather the metaprobability (or hyperensemble) that thesystem is described by a particular probability distribution. The resultis an entropic distribution with two parameters, one a non-equilibriumtemperature, and the other a measure of distance from equilibrium. Thisdispersion parameter smoothly interpolates between certainty of acanonical distribution at equilibrium and great uncertainty as to theprobability distribution as we move away from equilibrium. We deducethat, in general, large, rare fluctuations become far more common as wemove away from equilibrium.

As military operations in urban environments become more numerous, the ability of combat units to communicate, jam enemy communications, or employ RF weapons within this environment must be evaluated. To perform this evaluation in a mission level model requires a capability to evaluate the contributions of both terrain and man-made structures (interior and exterior) to RF propagation. The present study is an analysis of the adequacy of a mission level model (EADSIM) to perform these RF propagation calculations in an urban environment. Three basic environments must be assessed. The first environment consists entirely of terrain, with no man-made features impacting propagation values. The second environment includes terrain, but also includes the contribution of solid structures with abrupt edges, which may obstruct/influence LOS paths. The third environment includes not only terrain and structures, but also contains structures with interior features which must be evaluated to determine the propagation levels within and around these structures. EADSIM was used as the model for evaluation in view of its suite of propagation tools which can be used for analysis of RF propagation between transmitters and receivers including terrain. To assess EADSIM's capability to perform in these environments, flat terrain maps with an obstruction were …

The AIA secondary flight mirror, previously coated at Columbia University with Mg/SiC for the 303.8 {angstrom} channel and Mo/Y for the 93.9 {angstrom} channel was characterized by means of EUV reflectance measurements at beamline 6.3.2 of the Advanced Light Source (ALS) synchrotron at LBNL on January 10, 2006. Paul Boerner (LMSAL) also participated in these measurements.

The identification of enhancers with predicted specificitiesin vertebrate genomes remains a significant challenge that is hampered bya lack of experimentally validated training sets. In this study, weleveraged extreme evolutionary sequence conservation as a filter toidentify putative gene regulatory elements and characterized the in vivoenhancer activity of human-fish conserved and ultraconserved1 noncodingelements on human chromosome 16 as well as such elements from elsewherein the genome. We initially tested 165 of these extremely conservedsequences in a transgenic mouse enhancer assay and observed that 48percent (79/165) functioned reproducibly as tissue-specific enhancers ofgene expression at embryonic day 11.5. While driving expression in abroad range of anatomical structures in the embryo, the majority of the79 enhancers drove expression in various regions of the developingnervous system. Studying a set of DNA elements that specifically droveforebrain expression, we identified DNA signatures specifically enrichedin these elements and used these parameters to rank all ~;3,400human-fugu conserved noncoding elements in the human genome. The testingof the top predictions in transgenic mice resulted in a three-foldenrichment for sequences with forebrain enhancer activity. These datadramatically expand the catalogue of in vivo-characterized human geneenhancers and illustrate the future utility of such training sets for avariety of iological applications including decoding the regulatoryvocabulary of …

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The 1607-D4 Septic System was a septic tank and tile field that received sanitary sewage from the 115-D/DR Gas Recirculation Facility. This septic system operated from 1944 to 1968. Decommissioning took place in 1985 and 1986 when all above-grade features were demolished and the tank backfilled. The results of verification sampling demonstrated that residual contaminant concentrations do not preclude any future uses and allow for unrestricted use of shallow zone soils. The results also showed that residual contaminant concentrations are protective of groundwater and the Columbia River.

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The complexes [Ce(tmtaa)2], [Ce(tmtaa)(tmtaaH)]and[Ce2(tmtaa)3(thf)2]are obtained from Ce[N(SiMe3)2]3 and tmtaaH2, themacrocyclic ligand 6,8,15,17-tetramethyldibenzotetraaza[14]-annulene,depending on the stoichiometry, solvent and temperature. The crystalstructure of Ce(tmtaa)2 is isostructural with Zr(tmtaa)2, howevermagnetic susceptibility measurements in the range 5-300 K show thatCe(tmtaa)2 is not diamagnetic, but is a temperature-independentparamagnet (TIP), similar to Ce(cot)2, cerocene.

The amounts of CO2 that would need to be injected intogeologic storage reservoirs to achieve a significant reduction ofatmospheric emissions are very large. A 1000 MWe coal-fired power plantemits approximately 30,000 tonnes of CO2 per day, 10 Mt per year(Hitchon, 1996). When injected underground over a typical lifetime of 30years of such a plant, the CO2 plume may occupy a large area of order 100km2 or more, and fluid pressure increase in excess of 1 bar(corresponding to 10 m water head) may extend over an area of more than2,500 km2 (Pruess, et al., 2003). The large areal extent expected for CO2plumes makes it likely that caprock imperfections will be encountered,such as fault zones or fractures, which may allow some CO2 to escape fromthe primary storage reservoir. Under most subsurface conditions oftemperature and pressure, CO2 is buoyant relative to groundwaters. If(sub-)vertical pathways are available, CO2 will tend to flow upward and,depending on geologic conditions, may eventually reach potablegroundwater aquifers or even the land surface. Leakage of CO2 could alsooccur along wellbores, including pre-existing and improperly abandonedwells, or wells drilled in connection with the CO2 storage operations.The pressure increases accompanying CO2 injection will give rise tochanges in effective stress that could cause …

It is shown that the transient expansion of plutonium-gallium alloys observed both in the lattice parameter as well as in the dimension of a sample held at ambient temperature can be explained by assuming incipient precipitation of Pu{sub 3}Ga. However, this ordered {zeta}-phase is also subject to radiation-induced disordering. As a result, the gallium-stabilized {delta}-phase, being metastable at ambient temperature, is driven towards thermodynamic equilibrium by radiation-enhanced diffusion of gallium and at the same time reverted back to its metastable state by radiation-induced disordering. A steady state is reached in which only a modest fraction of the gallium present is arranged in ordered {zeta}-phase regions.

Since the earliest days of ultra-relativistic heavy ion physics, there has been interest in strange particle production. Originally, an anomalously large strangeness production was believed to be a signature of the Quark Gluon Plasma. Now the flavor composition of the plasma as reflected in the ratios of abundances of strange and non-strange particles is believed by advocates to tell us the temperature and baryon number density of the Quark Gluon Plasma at decoupling. In addition, there are arguments that suggest that the abundances of strange particles might at intermediate energy or at non-central rapidity, signal the existence of a critical end point of phase transitions in the baryon number chemical potential temperature plane. The purpose of this workshop is to assess the current theoretical and experimental understanding of strangeness production for ultra-relativistic heavy ion collisions.

Monte Carlo simulations are used to establish the potential of mean force between two globular proteins in an aqueous electrolyte solution. This potential includes nonelectrostatic contributions arising from dispersion forces first, between the globular proteins, and second, between ions in solution and between each ion and the globular protein. These latter contributions are missing from standard models. The potential of mean force, obtained from simulation, is fitted to an analytic equation. Using our analytic potential of mean force and Barker-Henderson perturbation theory, we obtain phase diagrams for lysozyme solutions that include stable and metastable fluid-fluid and solid-fluid phases when the electrolyte is 0.2 M NaSCN or NaI or NaCl. The nature of the electrolyte has a significant effect on the phase diagram.

The acceleration of the expansion of the universe, and theneed for Dark Energy, were inferred from the observations of Type Iasupernovae (SNe Ia) 1;2. There is consensus that SNeIa are thermonuclearexplosions that destroy carbon-oxygen white dwarf stars that accretematter from a companion star3, although the nature of this companionremains uncertain. SNe Ia are thought to be reliable distance indicatorsbecause they have a standard amount of fuel and a uniform trigger theyare predicted to explode when the mass of the white dwarf nears theChandrasekhar mass 4 - 1.4 solar masses. Here we show that the highredshift supernova SNLS-03D3bb has an exceptionally high luminosity andlow kinetic energy that both imply a super-Chandrasekhar mass progenitor.Super-Chandrasekhar mass SNeIa shouldpreferentially occur in a youngstellar population, so this may provide an explanation for the observedtrend that overluminous SNe Ia only occur in young environments5;6. Sincethis supernova does not obey the relations that allow them to becalibrated as standard candles, and since no counterparts have been foundat low redshift, future cosmology studies will have to considercontamination from such events.

The need for maintaining a lower specific engine oil temperature is essential in enhancing the longevity of the oil and of the engine and its components. By decreasing the engine oil temperature the oil is able to perform its job more efficiently. It is proposed to use the carbon foam, with its exceptional thermal management capabilities, to aid in reducing and stabilizing the engine oil temperature during steady state operation. Also, it is possible to use the carbon foam to heat the engine oil during startup to reduce emissions and possibly engine wear. The mesophase pitch derived carbon foam, developed at Oak Ridge National Laboratory, is a material that offers excellent thermal management capability. The foam has an open cell structure (0.98 fraction open porosity) with graphitic ligaments aligned parallel to the cell walls. The alignment of the graphitic ligaments in a three dimensional array gives the foam homogeneous thermal properties, unlike graphite fibers. The bulk thermal conductivity of the foam has been measured to be 175 W/m{center_dot}K, placing it on the level of 6061 aluminum, which has a bulk thermal conductivity of 180 W/m{center_dot}K. Copper has a bulk thermal conductivity over two times higher, at 400 W/m{center_dot}K. The proposed …

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We consider the adiabatic and quasi-static compression of adilute classical gas, confined in a piston and initially equilibratedwith a heat bath. We find that the work performed during this process isdescribed statistically by a gamma distribution. We use this result toshow that the model satisfies the non-equilibrium work and fluctuationtheorems, but not the fluctation-dissipation relation. We discuss therare but dominant realizations that contribute most to the exponentialaverage of the work, and relate our results to potentially universal workdistributions.

Multilayer coatings for the 7 EUV channels of the AIA have been developed and completed successfully on all AIA flight mirrors. Mo/Si coatings (131, 171, 193.5, 211 {angstrom}) were deposited at Lawrence Livermore National Laboratory (LLNL). Mg/SiC (304, 335 {angstrom}) and Mo/Y (94 {angstrom}) coatings were deposited at Columbia University. EUV reflectance of the 131/335 {angstrom}, 171 {angstrom}, 193.5/211 {angstrom} primary and secondary flight mirrors and the 94/304 {angstrom} secondary flight mirror was measured at beamline 6.3.2. of the Advanced Light Source (ALS) at LBNL. EUV reflectance of the 94/304 {angstrom} primary and secondary flight mirrors was measured at beamline X24C of the National Synchrotron Light Source (NSLS) at Brookhaven National Lab. Preliminary EUV reflectance measurements of the 94, 304 and 335 {angstrom} coatings were performed with a laser plasma source reflectometer located at Columbia University. Prior to multilayer coating, Atomic Force Microscopy (AFM) characterization and cleaning of all flight substrates was performed at LLNL.

We have released Version 2 of Milagro, an object-oriented, C++ code that performs radiative transfer using Fleck and Cummings' Implicit Monte Carlo method. Milagro, a part of the Jayenne program, is a stand-alone driver code used as a methods research vehicle and to verify its underlying classes. These underlying classes are used to construct Implicit Monte Carlo packages for external customers. Milagro-2 represents a design overhaul that allows better parallelism and extensibility. New features in Milagro-2 include verified momentum deposition, restart capability, graphics capability, exact energy conservation, and improved load balancing and parallel efficiency. A users' guide also describes how to configure, make, and run Milagro2.

Time-resolved FT-IR spectra of carbon monoxide hydrogenation over alumina-supported ruthenium were recorded on the millisecond timescale at 703 K using various H{sub 2} concentrations (1 atm total pressure). Adsorbed carbon monoxide was detected along with gas phase products methane (3016 and 1306 cm{sup -1}), water (sharp bands from 1900 - 1300 cm{sup -1}), and carbon dioxide (2348 cm{sup -1}). No other surface species were detected other than adsorbed carbon monoxide. The rate of formation of methane (2.5 {+-} 0.4 s{sup -1}) coincides with the rate of formation of carbon dioxide (3.4 {+-} 0.6 s{sup -1}), and bands due to water are observed to grow in over time. These results establish that methane and carbon dioxide originate from the same intermediate. The adsorbed carbon monoxide band is broad and unsymmetrical with a maximum at 2010 cm{sup -1} in spectra observed at 36 ms that shifts over 3000 ms to 1960 cm{sup -1} due to decreasing amounts of adsorbed carbon monoxide. Kinetic analysis of the adsorbed carbon monoxide band reveals that only a portion of the band can be temporally linked to gas phase products that we observe over the first 1000 ms of catalysis. This result suggests that we are observing …

Providing the essential energy and water systems to support human needs while understanding and addressing their environmental consequences is a watershed problem for the 21st century. The LLNL Earth System Science and Engineering Program seeks to provide the scientific understanding and technological expertise to help provide solutions at both global and regional scales. Our work is highly collaborative with universities, laboratories and industrial partners across the world and involves observational data, laboratory experiments, and numerical simulations. The energy systems we have enjoyed for the last 100 years have resulted in the advanced standard of living in the developed world and a major emerging problem with climate change. Now we face a simultaneous realization that our reliance on fossil fuels is a source of conflict and economic disruption as well as causing potentially abrupt, even catastrophic global climate change. The climate and energy problem is perhaps the greatest challenge ever faced by mankind. Fossil fuel remains the least expensive and most available source of energy and the basis of our economy. The use of fossil fuels, especially over the last 100 years has led to a 30% increase in CO{sub 2} in the atmosphere. The problem is growing. The population of …

This report is a compilation of the calendar year 2005 groundwater sampling results from the Area 5 Radioactive Waste Management Site. In additon to providing groundwater monitoring results, this report also includes information regarding site hydrogeology, well construction, sample collection, and meteorological data measured at the Area 5 Radioactive Waste Management Site at the Nevada Test Site, Ny County, Nevada.

Welcome to the 2006 joint meeting of the fourth Genomics:GTL Contractor-Grantee Workshop and the six Metabolic Engineering Working Group Inter-Agency Conference. The vision and scope of the Genomics:GTL program continue to expand and encompass research and technology issues from diverse scientific disciplines, attracting broad interest and support from researchers at universities, DOE national laboratories, and industry. Metabolic engineering's vision is the targeted and purposeful alteration of metabolic pathways to improve the understanding and use of cellular pathways for chemical transformation, energy transduction, and supramolecular assembly. These two programs have much complementarity in both vision and technological approaches, as reflected in this joint workshop. GLT's challenge to the scientific community remains the further development and use of a broad array of innovative technologies and computational tools to systematically leverage the knowledge and capabilities brought to us by DNA sequencing projects. The goal is to seek a broad and predictive understanding of the functioning and control of complex systems--individual microbes, microbial communities, and plants. GTL's prominent position at the interface of the physical, computational, and biological sciences is both a strength and challenge. Microbes remain GTL's principal biological focus. In the complex 'simplicity' of microbes, they find capabilities needed by DOE and …