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Entropic Approach to the Detection of Crucial Events (open access)

Entropic Approach to the Detection of Crucial Events

This article establishes a clear distinction between two processes yielding anomalous diffusion and 1/ f noise. One of the processes, Aging Fractional Brownian Motion (AFBM), has been concluded to be the form of communication between the heart and the brain.
Date: December 22, 2018
Creator: Culbreth, Garland; West, Bruce J. & Grigolini, Paolo
Object Type: Article
System: The UNT Digital Library
New mechanism of plasmons specific for spin-polarized nanoparticles (open access)

New mechanism of plasmons specific for spin-polarized nanoparticles

This article experimentally shows that Co nanoparticles with a single-domain crystal structure support a plasmon resonance at approximately 280 nm with better quality than gold nanoparticle resonance in the visible. The magnetic nature of these nanoparticles suggests a new type of these plasmons.
Date: March 27, 2018
Creator: Bhatta, Hari L.; Aliev, Abil E. & Drachev, Vladimir P.
Object Type: Article
System: The UNT Digital Library
Promoting bioanalytical concepts in genetics: A TATA box molecularly imprinted polymer as a small isolated fragment of the DNA damage repairing system (open access)

Promoting bioanalytical concepts in genetics: A TATA box molecularly imprinted polymer as a small isolated fragment of the DNA damage repairing system

Article describes study which demonstrates that a new, stable, artificial TATA (T — thymine, A — adenine) box is recognized by amino acids recognizing the natural TATA box.
Date: February 13, 2019
Creator: Bartold, Katarzyna; Pietrzyk-Le, Agnieszka; Lisowski, Wojciech; Golebiewska, Karolina; Siklitskaya, Alexandra; Borowicz, Pawel et al.
Object Type: Article
System: The UNT Digital Library
Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass (open access)

Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass

Correction to the previously published article "Multiple levers for overcoming the recalcitrance of lignocellulosic biomass".
Date: February 9, 2019
Creator: Holwerda, Evert; Worthen, Robert; Kothari, Ninad; Lasky, Ronald; Davison, Brian H. (Brian Henry), 1957-; Fu, Chunxiang et al.
Object Type: Article
System: The UNT Digital Library
Giant spin Hall effect in two-dimensional monochalcogenides (open access)

Giant spin Hall effect in two-dimensional monochalcogenides

This article, using calculations from first principles, reveals for the first time giant intrinsic spin Hall conductivities (SHC) in these materials. In particular, the article shows that the SHC resonances can be easily tuned by combination of strain and doping and, in some cases, strain can be used to induce semiconductor to metal transition that makes a giant spin Hall effect possible even in absence of doping.
Date: October 30, 2018
Creator: Sławińska, Jagoda; Cerasoli, Frank T.; Wang, Haihang; Postorino, Sara; Supka, Andrew; Curtarolo, Stefano et al.
Object Type: Article
System: The UNT Digital Library
Solvation Descriptors for Zwitterionic α-Aminoacids; Estimation of Water–Solvent Partition Coefficients, Solubilities, and Hydrogen-Bond Acidity and Hydrogen-Bond Basicity (open access)

Solvation Descriptors for Zwitterionic α-Aminoacids; Estimation of Water–Solvent Partition Coefficients, Solubilities, and Hydrogen-Bond Acidity and Hydrogen-Bond Basicity

This article uses the literature data on solubilities and water–solvent partition coefficients to obtain properties or “Absolv descriptors” for zwitterionic α-aminoacids: glycine, α-alanine (α-aminopropanoic acid), α-aminobutanoic acid, norvaline (α-aminopentanoic acid), norleucine (α-aminohexanoic acid), valine (α-amino-3-methylbutanoic acid), leucine (α-amino-4-methylpentanoic acid), and α-phenylalanine.
Date: February 8, 2019
Creator: Abraham, M. H. (Michael H.) & Acree, William E. (William Eugene)
Object Type: Article
System: The UNT Digital Library
Topological mixing properties of rank‐one subshifts (open access)

Topological mixing properties of rank‐one subshifts

Article describes study examining the topological mixing properties and the maximal equicontinuous factor of rank‐one subshifts as topological dynamical systems
Date: February 7, 2019
Creator: Gao, Su & Ziegler, Caleb
Object Type: Article
System: The UNT Digital Library
Targeting the pattern-triggered immunity pathway to enhance resistance to Fusarium graminearum (open access)

Targeting the pattern-triggered immunity pathway to enhance resistance to Fusarium graminearum

Article describes study which shows that resistance against fusarium graminearum, the primary casual agent of fusarium head blight (FHB), can be enhanced by flg22, a bacterial microbe-associated molecular pattern (MAMP).
Date: February 6, 2019
Creator: Sarowar, Sujon; Alam, Syeda T.; Makandar, Ragiba; Lee, Hyeonju; Trick, Harold N.; Dong, Yanhong et al.
Object Type: Article
System: The UNT Digital Library
Electrodynamics of superlattices with ultra-thin metal layers: quantum Landau damping and band gaps with nonzero density of states (open access)

Electrodynamics of superlattices with ultra-thin metal layers: quantum Landau damping and band gaps with nonzero density of states

This article develops a theory of electromagnetic transmission through dielectric-metal superlattices with ultra-thin metal films, in which electron motion in the direction perpendicular to the metal surfaces is quantized.
Date: October 16, 2018
Creator: Castillo-López, S. G.; Krokhin, Arkadii A.; Makarov, N. M. & Pérez-Rodríguez, F.
Object Type: Article
System: The UNT Digital Library
Multiple levers for overcoming the recalcitrance of lignocellulosic biomass (open access)

Multiple levers for overcoming the recalcitrance of lignocellulosic biomass

The article evaluates the impacts of physical, chemical and genetic interventions to improve biomass processing singly and in combination. Based on their results and literature studies, some form of non-biological augmentation will likely be necessary for the foreseeable future to achieve high total carbohydrate solubilization (TCS) for most cellulosic feedstocks. The results show that this need not necessarily involve thermochemical processing, and need not necessarily occur prior to biological conversion.
Date: January 17, 2019
Creator: Holwerda, Evert; Worthen, Robert; Kothari, Ninad; Lasky, Ronald; Davison, Brian H. (Brian Henry), 1957-; Fu, Chunxiang et al.
Object Type: Article
System: The UNT Digital Library
Grand canonical simulations of electrochemical interfaces in implicit solvation models (open access)

Grand canonical simulations of electrochemical interfaces in implicit solvation models

Article discussing grand canonical simulations based on density-functional theory to study the thermodynamic properties of electrochemical interfaces of metallic electrodes in aqueous environments.
Date: August 31, 2018
Creator: Hörmann, Nicolas; Andreussi, Oliviero & Marzari, Nicola
Object Type: Article
System: The UNT Digital Library
Draft Genome Sequence of the Cyanotroph Pseudomonas monteilii BCN3 (open access)

Draft Genome Sequence of the Cyanotroph Pseudomonas monteilii BCN3

This article reports the first draft genome of Pseudomonas monteilii BCN3, a cyanotroph isolated from sewage sludge.
Date: January 3, 2019
Creator: Jones, Lauren B. & Kunz, Daniel A.
Object Type: Article
System: The UNT Digital Library
Apparent Specific Volumes of Sucrose in Different Aqueous Cosolvent Mixtures at 298.2 K (open access)

Apparent Specific Volumes of Sucrose in Different Aqueous Cosolvent Mixtures at 298.2 K

This article explores research to determine the apparent specific volume of sucrose by measuring the density of sucrose in {cosolvent + water} mixtures at 298.2 K. The study finds that a mean apparent specific volume value of 0.632 cm³.g⁻¹ for sucrose in different aqueous-cosolvent mixtures could be adequate for practical purposes in pharmaceutical industries.
Date: December 30, 2018
Creator: Tinjacá, Darío; Muñoz, María M.; Martínez, Fleming; Jouyban, Abolghasem & Acree, William E. (William Eugene)
Object Type: Article
System: The UNT Digital Library
Foias Numbers (open access)

Foias Numbers

This article identifies the principal features in Foias’ original proof and streamlines them into a general result. The result gives further evidence to the observation that the connection between the sequence with initial seed the Foias constant and the Prime Number Theorem must be fortuitous.
Date: December 30, 2018
Creator: Anghel, Nicolae
Object Type: Article
System: The UNT Digital Library
Beyond the wall: High-throughput quantification of plant soluble and cell-wall bound phenolics by liquid chromatography tandem mass spectrometry (open access)

Beyond the wall: High-throughput quantification of plant soluble and cell-wall bound phenolics by liquid chromatography tandem mass spectrometry

Article describes a study in which a novel high-throughput ultra-high performance liquid chromatography tandem mass spectrometry (UHPLC–MS/MS) method was established to quantify the levels of 19 flavonoids and 15 other phenolic compounds, including acids, aldehydes, and alcohols.
Date: December 26, 2018
Creator: Cocuron, Jean-Christophe; Casas, Maria Isabel; Yang, Fan & Grotewold, Erich
Object Type: Article
System: The UNT Digital Library
Continuum models of the electrochemical diffuse layer in electronic-structure calculations (open access)

Continuum models of the electrochemical diffuse layer in electronic-structure calculations

This article presents a critical comparison of continuum diffuse-layer models that can be coupled to an atomistic first-principles description of the charged metal surface in order to account for the electrolyte screening at electrified interfaces.
Date: August 31, 2018
Creator: Nattino, Francesco; Truscott, Matthew; Marzari, Nicola & Andreussi, Oliviero
Object Type: Article
System: The UNT Digital Library
Peptide signaling molecules CLE5 and CLE6 affect Arabidopsis leaf shape downstream of leaf patterning transcription factors and auxin (open access)

Peptide signaling molecules CLE5 and CLE6 affect Arabidopsis leaf shape downstream of leaf patterning transcription factors and auxin

Article describes a role in Arabidopsis leaf development for two members of the CLAVATA3/ESR‐RELATED peptide family, CLE5 and CLE6, which lie adjacent to each other on chromosome 2.
Date: December 20, 2018
Creator: DiGennaro, Peter; Grienenberger, Etienne; Dao, Thai Q.; Jun, Ji Hyung & Fletcher, Jennifer C.
Object Type: Article
System: The UNT Digital Library
Plasmonically-powered hot carrier induced modulation of light emission in a two-dimensional GaAs semiconductor quantum well (open access)

Plasmonically-powered hot carrier induced modulation of light emission in a two-dimensional GaAs semiconductor quantum well

Article describes an experiment in which a hot-electron-enabled route to controlling light with dissipative loss compensation in semiconductor quantum light emitters has been realized for tunable quantum optoelectronic devices via a two-species plasmon system.
Date: December 10, 2018
Creator: Ashalley, Eric; Gryczynski, Karol; Wang, Zhiming; Salamo, Gregory & Neogi, Arup
Object Type: Article
System: The UNT Digital Library
Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light (open access)

Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light

Article reveal that the systemic transcriptomic response of plants to excess light stress is extensive in the context of systemic acquired acclimation and involves an early (2 min) and transient stage of transcript expression that includes thousands of genes.
Date: December 6, 2018
Creator: Zandalinas, Sara I.; Sengupta, Soham; Burks, David; Azad, Rajeev K. & Mittler, Ron
Object Type: Article
System: The UNT Digital Library
Generalized molecular solvation in non-aqueous solutions by a single parameter implicit solvation scheme (open access)

Generalized molecular solvation in non-aqueous solutions by a single parameter implicit solvation scheme

Article presenting a systematic parametrization protocol for the Self-Consistent Continuum Solvation (SCCS) model resulting in optimized parameters for 67 non-aqueous solvents. The parametrization is based on a collection of ≈6000 experimentally measured partition coefficients, which were collected in the Solv@TUM database presented here. The accuracy of the optimized SCCS model is comparable to the well-known universal continuum solvation model (SMx) family of methods, while relying on only a single fit parameter and thereby largely reducing statistical noise.
Date: August 3, 2018
Creator: Acree, William E. (William Eugene); Hille, Christoph; Ringe, Stefan; Deimel, Martin; Kunkel, Christian; Reuter, Karsten et al.
Object Type: Article
System: The UNT Digital Library
Genome Mining of Plant NPFs Reveals Varying Conservation of Signature Motifs Associated With the Mechanism of Transport (open access)

Genome Mining of Plant NPFs Reveals Varying Conservation of Signature Motifs Associated With the Mechanism of Transport

This article focuses on four structural features of nitrate peptide families/proton-coupled oligopeptide transporters/peptide transporters that have been shown by structural and functional studies to be essential to proton-coupled symport transport.
Date: December 4, 2018
Creator: Longo, Antonella; Miles, Nicholas W. & Dickstein, Rebecca
Object Type: Article
System: The UNT Digital Library
Local and Systemic Metabolic Responses during Light-Induced Rapid Systemic Signaling (open access)

Local and Systemic Metabolic Responses during Light-Induced Rapid Systemic Signaling

This article reports that local application of light stress to one rosette leaf of bolting Arabidopsis (Arabidopsis thaliana) plants resulted in a metabolic response that encompassed local, systemic and transport tissues, demonstrating a high degree of physical and metabolic continuity between different tissues throughout the plant.
Date: December 2018
Creator: Choudhury, Feroza K.; Devireddy, Amith R.; Azad, Rajeev K.; Shulaev, Vladimir & Mittler, Ron
Object Type: Article
System: The UNT Digital Library
Genetic Mutations in the S-loop of Human Glutathione Synthetase: Links Between Substrate Binding, Active Site Structure and Allostery (open access)

Genetic Mutations in the S-loop of Human Glutathione Synthetase: Links Between Substrate Binding, Active Site Structure and Allostery

This article uses molecular dynamics simulations and experimental point mutations to probe the role of S-loop residues in tertiary structure, substrate binding, and allosteric communication.
Date: November 29, 2018
Creator: Ingle, Brandall L.; Shrestha, Bibesh; De Jesus, Margarita C.; Conrad-Webb, Heather M.; Anderson, Mary E. & Cundari, Thomas R., 1964-
Object Type: Article
System: The UNT Digital Library
Controlling Topological States in Topological/Normal Insulator Heterostructures (open access)

Controlling Topological States in Topological/Normal Insulator Heterostructures

This article contains a systematic investigation of the nature of the nontrivial interface states in topological/normal insulator (TI/NI) heterostructures.
Date: November 26, 2018
Creator: Costa, Marcio; Costa, Antônio T.; Freitas, Walter A.; Schmidt, Tome M.; Buongiorno Nardelli, Marco & Fazzio, Adalberto
Object Type: Article
System: The UNT Digital Library