Data management plan for the grant, "Development of advanced biocatalyst tools and resources to enable biogas-based biomanufacturing."

Article modeling Metal-based bifunctional methane activators using density functional theory. The research yields insight into possible avenues for bio-inspired methane activators.

This article discusses closed-form expressions for the magnetic fields produced by rectangular- and circular-shaped finite-length solenoids and current loops. The closed-form expression for the magnetic field of a rectangular-shaped finite-length solenoid is derived using the Biot–Savart law. Closed-form expressions for the magnetic fields of solenoids and current loops can be used to avoid approximations in analytical models and may reduce computation time in computer simulations.

Article proves the existence of an infinite number of radial solutions to ∆u+K(r)f(u) = 0 on ℝᶰ such that limᵣ →∞ u(r) = 0 with prescribed number of zeros on the exterior of the ball of radius R > 0 where f is odd with f < 0 on (0, β), f > 0 on (β, ∞) with f superlinear for large u, and K(r) ∼ r ⁻ᵅ with α > 2(N − 1).

This article is a simplified analysis of a convenient thulium fiber laser source with 3 W of output power operating at a wavelength of 2059 nm with a slope efficiency of 49% with respect to input pump power and 60% with respect to absorbed pump power. The laser was applied in an atomic helium spectroscopy experiment to quench ³He (2058.63 nm) and ⁴He (2058.69 nm) meta-stable singlets (2¹S0), allowing for further investigation of the helium fine structure.

Article

This article is the third essay advocating the use the (non-integer) fractional calculus (FC) to capture the dynamics of complex networks in the twilight of the Newtonian era. Herein, the focus is on drawing a distinction between networks described by monfractal time series extensively discussed in the prequels and how they differ in function from multifractal time series, using physiological phenomena as exemplars.

Data management plan for the grant "Development of Novel Approaches to Earth-abundant Methane Catalysis." Research on catalytic cycles for C–H activation and functionalization of light alkanes based on the CMD (concerted metalation deprotonation) mechanism will be modeled for Earth-abundant metal dicarboxylates and related complexes. The impact of inner and outer coordination sphere effects upon catalytic cycles for light alkane functionalization will be assessed using computational chemistry techniques. The aforementioned studies will be leveraged to identify promising, synthetically feasible lead catalysts for experimental collaborators.

Data management plan for the grant, "NSFDEB-NERC: Collaborative Research: Wildlife corridors: do they work and who benefits?" Research on the impact of wildlife corridors using genetics as the measure of effectiveness. The study will use 20 independent landscapes to quantify how corridor traits affect gene flow, and will use non-flying mammals as focal species because they are strongly affected by fragmentation. The research team hypothesizes (1) a strong non-linear decline in success (gene flow) with corridor length, reflecting the skewed distribution of dispersal distances within species; (2) success will drop steeply as corridor width falls below a threshold, with the threshold determined by species traits; and (3) species that are bigger, are habitat specialists, or have greater dispersal abilities (relative to brain size or reproductive rate) will benefit more from corridors. Testing these hypotheses will allow generalization to a wide range of mammal species not included in this project. It will use highly flexible Random Forest models to answer the overarching question: What landscape traits (e.g., corridor width, degree of human disturbance) and species traits (mobility, affinity to particular land cover types) are associated with effective corridors?

Article describes the development of a physics-based molecular force field (PMFF) by integrating a set of potential energy functions in which each term in an intermolecular potential energy function is derived based on experimental values, such as the dipole moments, lattice energy, proton transfer energy, and X-ray crystal structures.

This article investigates the hypothesis that exposure to engine emissions increases systemic and local adipocyte RAS signaling, promoting the expression of factors involved in cardiovascular disease and obesity.

Article discusses how the chemical coupling between moist CO oxidation and transformation of gaseous potassium salts (KCl or KOH) in the presence and absence of SO2 was investigated experimentally and through chemical kinetic modeling. Analysis of the calculations indicates that sulfation pathways in the model involving KOSO3 contribute to the overprediction, but both the thermodynamic properties and rate constants in the model involve significant uncertainties and more work is required to resolve the discrepancy.

Authors of the article assert that isoflavonoids play important roles in plant defense and also exhibit a range of mammalian health-promoting activities. They emphasize that understanding the structural basis of isoflavone biosynthesis will facilitate the engineering of new bioactive isoflavonoids.

Data management plan for the grant "Elucidating Cyclic Fatty Acid Biosynthesis and Compartmentalization to Improve Cottonseed Value." Cotton is an important oilseed crop in the U.S. economy. Cotton seed and other vegetative tissues produce unusual chemicals called cyclic fatty acids that have wide-ranging potential uses from high-value industrial properties to nutrition-oriented uses. This project focuses on identifying genes that contribute to the production and storage of these high value bioproducts.

Data management plan for the research grant "Generating pathogen- / pest-resistant non-GMO cotton through targeted genome editing of oxylipin signaling pathways."

Article presents a study where whole transcriptome sequencing (RNA-seq) and differential expression analysis were used to identify early (1–3 hr) transcriptional changes induced by the exogenous treatment of NAE 18:2 and NAE 18:3 in cotyledons, roots, and seedlings.

Article is a study exploring the possibility of using the tobacco retrotransposon Tnt1 to create a transposon-based insertion mutant population in B. distachyon.

Data management plan for the grant, "Non-Genetic Inheritance of Hypoxia Tolerance in Fishes: Dynamics and Mechanisms." Research quantifying the inheritance of tolerance to low oxygen in a model fish and then determine the tolerance mechanisms, at organismal to molecular levels, that are passed on from parents to their offspring. The investigators will not only focus on conventional, well-studied genetic mechanisms for inheritance, but will explore so-called “epigenetic” forms of inheritance that may transfer parental characteristics for only a generation or two. Such “temporary inheritance” might actually require less energy and be more beneficial to a species than the more permanent form of genetic inheritance. This project will quantify non-genetic inheritance of hypoxia tolerance in zebrafish as a model organism and then identify underlying mechanisms, at organismal to molecular levels, in parents and in their progeny. Specifically, this project will quantify non-genetically inherited traits that allow hypoxia tolerance, determine “wash-in” and “wash-out” (i.e., the dynamics) of hypoxia-tolerant phenotypes across multiple generations, and establish epigenetic mechanism(s) of non-genetic inheritance in subsequent generations. The information provided by this project will allow biologists to better predict, and perhaps even mitigate, the negative consequences of future episodes of low oxygen in rivers and lakes.

Data management plan for the grant, "Chemical-Guided Identification of Primary Metabolic Targets for Improvement of Hydroxy Fatty Acid Synthesis in Physaria fendleri." Research on the identification of primary metabolic targets using chemical-guided identification. The first objective of this research is to conduct metabolomics analysis on P. fendleri embryos cultured with two identified chemical regulators of fatty acid metabolism. The second objective of this research is to generate a metabolic flux map of embryos treated with these regulatory compounds in order to determine how metabolic rates and carbon flow can be manipulated to improve HFA production in this species and increase its commercial viability. With properties that could replace imported castor oil, research on the crop in discussion is situated directly in the scope of the USDA-AFRI Education and Workforce Development goals.

Data management plan for the grant, "Southwest Local Algebra Meeting 2023." No data will be collected or reported for this grant.

Article discusses how China implemented the first phase of its National Healthy Cities pilot program from 2016-20. Authors recommend aligning the Healthy Cities initiative in China with strategic national and global level agendas such as Healthy China 2030 and the Sustainable Development Goals (SDGs) by providing an integrative governance framework to facilitate a coherent intersectoral program to systemically improve population health.

Data management plan for the grant, "Graduate Research Fellowship Program (GRFP): Landscape genetics of wild turkey (Meleagris gallopavo) in Texas."

Data management plan for the grant, "Structural and mechanistic studies of oxalate catabolism." Biologically derived oxalic acid has been shown to have a negative impact on crop production and human health. Oxalate present in plant foods can decrease their nutritional value by binding to calcium and rendering that calcium unavailable for nutritional absorption. This project will study the structure and function of key enzymes in oxalate turnover to understand their biological functions and mechanisms, facilitating metabolic engineering of plants toward improving nutritional quality and production of plant derived foods.

Data management plan for the grant, "Novel regulators of Slo2 potassium channels"