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Inhibition of Very Long Chain Fatty Acids Synthesis Mediates PI3P Homeostasis at Endosomal Compartments (open access)

Inhibition of Very Long Chain Fatty Acids Synthesis Mediates PI3P Homeostasis at Endosomal Compartments

This article uses metazachlor, an inhibitor of VLCFA synthesis, to find that VLCFAs are involved in the TGN/MVB distribution of PI3P. This effect is independent from either synthesis of PI3P by PI3-kinase or degradation of PI(3,5)P2 into PI3P by the SUPPRESSOR OF ACTIN1 (SAC1) phosphatase. Results suggest that PI3P might be transferable from TGN to MVBs and that VLCFAs act in this process.
Date: August 6, 2021
Creator: Ito, Yoko; Esnay, Nicolas; Fougère, Louise; Platre, Matthieu Pierre; Cordelières, Fabrice; Jaillais, Yvon et al.
Object Type: Article
System: The UNT Digital Library
Deep Minimum and a Vortex for Positronium Formation in Low-Energy Positron-Helium Collisions (open access)

Deep Minimum and a Vortex for Positronium Formation in Low-Energy Positron-Helium Collisions

This article finds a zero in the positronium formation scattering amplitude and a deep minimum in the logarithm of the corresponding differential cross section for positron–helium collisions for an energy just above the positronium formation threshold. Results show that there is a valley in the logarithm of the positronium formation differential cross section that includes the deep minimum and also a minimum in the forward direction.
Date: August 6, 2021
Creator: Alrowaily, Albandari W.; Quintanilla, Sandra J. & Van Reeth, Peter
Object Type: Article
System: The UNT Digital Library
Patch characteristics and domestic dogs differentially affect carnivore space use in fragmented landscapes in southern Chile (open access)

Patch characteristics and domestic dogs differentially affect carnivore space use in fragmented landscapes in southern Chile

This article's aim is to determine whether (a) the spatial use of domestic dogs increases with habitat destruction, and (b) domestic dogs and habitat destruction drive the spatial use of native carnivores in a heavily degraded agricultural landscape. Conclusions highlight that domestic dog occupancy was positively correlated with habitat loss and future conditions of increased fragmentation and habitat loss will likely increase the potential contact between domestic dogs and native carnivores.
Date: August 30, 2021
Creator: Malhotra, Rumaan; Jiménez, Jaime E. & Harris, Nyeema C;
Object Type: Article
System: The UNT Digital Library
Dense Locally Finite Subgroups of Automorphism Groups of Ultraextensive Spaces (open access)

Dense Locally Finite Subgroups of Automorphism Groups of Ultraextensive Spaces

Article verifying a conjecture of Vershik by showing that Hall’s universal countable locally finite group can be embedded as a dense subgroup in the isometry group of the Urysohn space and in the automorphism group of the random graph. It shows the same for all automorphism groups of known infinite ultraextensive spaces.
Date: August 18, 2021
Creator: Etedadialiabadi, Mahmood; Gao, Su; Le Maître, François & Melleray, Julien
Object Type: Article
System: The UNT Digital Library
Crucial Development: Criticality Is Important to Cell-to-Cell Communication and Information Transfer in Living Systems (open access)

Crucial Development: Criticality Is Important to Cell-to-Cell Communication and Information Transfer in Living Systems

This article is the fourth paper of the Special Issue Memory and Criticality. It bridges the the theoretical debate on the role of memory and criticality discussed in the three earlier manuscripts, with a review of key concepts in biology and focus on cell-to-cell communication in organismal development. The authors suggest that in conjunction with morphogenetic gradients, there exist gradients of information transfer creating cybernetic loops of stability and disorder, setting the stage for adaptive capability. Criticality, therefore, appears to be an important factor in the transmission, transfer and coding of information for complex adaptive system development.
Date: August 31, 2021
Creator: Hunt von Herbing, Ione; Tonello, Lucio; Benfatto, Maurizio; Pease, April & Grigolini, Paolo
Object Type: Article
System: The UNT Digital Library
Editorial: Microbial C1 Metabolism and Biotechnology (open access)

Editorial: Microbial C1 Metabolism and Biotechnology

This article is an editorial on the research topic Microbial C1 Metabolism and Biotechnology. This special topic presents studies focused on the fundamental aspects of C1 metabolism in diverse microbial systems with the ability to convert anthropogenic greenhouse gases into valuable products.
Date: August 27, 2021
Creator: Xiong, Wei; Kalyuzhnaya, Marina G. & Henard, Calvin
Object Type: Article
System: The UNT Digital Library
Development of Novel Approaches to Earth-abundant Methane Catalysis (open access)

Development of Novel Approaches to Earth-abundant Methane Catalysis

Data management plan for the grant "Development of Novel Approaches to Earth-abundant Methane Catalysis." Research on catalytic cycles for C–H activation and functionalization of light alkanes based on the CMD (concerted metalation deprotonation) mechanism will be modeled for Earth-abundant metal dicarboxylates and related complexes. The impact of inner and outer coordination sphere effects upon catalytic cycles for light alkane functionalization will be assessed using computational chemistry techniques. The aforementioned studies will be leveraged to identify promising, synthetically feasible lead catalysts for experimental collaborators.
Date: 2021-08-15/2024-08-14
Creator: Cundari, Thomas R., 1964-
Object Type: Text
System: The UNT Digital Library
Elucidating the role of negative parenting in the genetic v. environmental influences on adult psychopathic traits (open access)

Elucidating the role of negative parenting in the genetic v. environmental influences on adult psychopathic traits

Article states that though adult psychopathic traits emerge from both genetic and environmental risk, no studies have examined etiologic associations between adult psychopathic traits and experiences of parenting in childhood, or the extent to which parenting practices may impact the heritability of adult psychopathic traits using a genetically-informed design. Utilizing a genetically-informed design, the authors found that both genetic and non-shared environmental factors contribute to the emergence of psychopathic traits.
Date: August 12, 2021
Creator: Dotterer, Hailey L.; Vazquez, Alexandra Y.; Hyde, Luke W.; Neumann, Craig S.; Santtila, Pekka; Pezzoli, Patrizia et al.
Object Type: Article
System: The UNT Digital Library
Model checking via testing for direct effects in Mendelian Randomization and transcriptome-wide association studies (open access)

Model checking via testing for direct effects in Mendelian Randomization and transcriptome-wide association studies

This article proposes a new and general goodness-of-fit (GOF) test, called TEDE (TEsting Direct Effects), applicable to both correlated and independent SNPs/IVs as commonly used in transcriptome-wide association studies (TWAS) and Mendelian randomization (MR) respectively.
Date: August 2, 2021
Creator: Deng, Yangqing & Pan, Wei
Object Type: Article
System: The UNT Digital Library
Development of Neutral Red as a pH/pCO2 Luminescent Sensor for Biological Systems (open access)

Development of Neutral Red as a pH/pCO2 Luminescent Sensor for Biological Systems

This article demonstrates for the first time that Neutral Red (NR) can also serve as a CO2 sensor, because of NR’s unique optical properties, which change with dissolved carbon dioxide (dCO2) concentrations. In this article optical sensitivity of NR was quantified as a function of changes in absorption and emission spectra to dCO2 in a pH 7.3 buffer medium at eight dCO2 concentrations.
Date: August 5, 2021
Creator: Ericson, Megan N.; Shankar, Sindhu K.; Chahine, Laya M.; Omary, Mohammad A.; Hunt von Herbing, Ione & Marpu, Sreekar
Object Type: Article
System: The UNT Digital Library
Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (RubisCO) Is Essential for Growth of the Methanotroph Methylococcus capsulatus Strain Bath (open access)

Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (RubisCO) Is Essential for Growth of the Methanotroph Methylococcus capsulatus Strain Bath

This article demonstrates that shows both CO2 and RubisCO are essential for M. capsulatus Bath growth. CO2 tracing experiments supported that RubisCO mediates CO2 fixation and that a noncanonical Calvin cycle is active in this organism. The study provides insights into the expanding knowledge of methanotroph metabolism and implicates dually CH4/CO2-utilizing bacteria as more important players in the biogeochemical carbon cycle than previously appreciated. In addition, M. capsulatus and other methanotrophs with CO2 assimilation capacity represent candidate organisms for the development of biotechnologies to mitigate the two most abundant greenhouse gases, CH4 and CO2.
Date: August 26, 2021
Creator: Henard, Calvin; Wu, Chao; Xiong, Wei; Henard, Jessica M.; Davidheiser-Kroll, Brett; Orata, Fabini D. et al.
Object Type: Article
System: The UNT Digital Library
High degree of non-genetic phenotypic variation in the vascular system of crayfish: a discussion of possible causes and implications (open access)

High degree of non-genetic phenotypic variation in the vascular system of crayfish: a discussion of possible causes and implications

This article studies the hemolymph vascular system (HVS) in two cambarid crayfishes, i.e. the Marbled Crayfish, Procambarus virginalis Lyko, 2017 and the Spiny Cheek Crayfish, Faxonius limosus (Rafinesque, 1817) in regard to areas of non-genetic phenotypic variation.
Date: August 12, 2021
Creator: Scholz, Stephan; Göpel, Torben; Richter, Stefan & Wirkner, Christian S.
Object Type: Article
System: The UNT Digital Library
Magnesium and Fibromyalgia: A Literature Review (open access)

Magnesium and Fibromyalgia: A Literature Review

This article investigates if the widespread use of magnesium in fibromyalgia is supported by evidence in the literature. This review provides a layout of the studies examining the correlation between body magnesium levels and fibromyalgia and elaborates on the trials testing the effectiveness of magnesium in treating different clinical parameters of fibromyalgia.
Date: August 14, 2021
Creator: Boulis, Michael; Boulis, Mary & Clauw, Daniel
Object Type: Article
System: The UNT Digital Library
Phylogenetic Occurrence of the Phenylpropanoid Pathway and Lignin Biosynthesis in Plants (open access)

Phylogenetic Occurrence of the Phenylpropanoid Pathway and Lignin Biosynthesis in Plants

This article is a review summarizing recent progress in defining the lignin biosynthetic pathway in lycophytes, monilophytes, gymnosperms, and angiosperms. This review provides new insights into the genetic engineering of the lignin biosynthetic pathway to overcome biomass recalcitrance in bioenergy crops.
Date: August 17, 2021
Creator: Yao, Tao; Feng, Kai; Xie, Meng; Barros, Jaime; Tschaplinski, Timothy J.; Tuskan, Gerald et al.
Object Type: Article
System: The UNT Digital Library
Regulators of von Willebrand Factor Levels (open access)

Regulators of von Willebrand Factor Levels

Data management plan for the grant "Regulators of von Willebrand Factor Levels." Von Willebrand Disease is the most prevalent bleeding disease. In one of the types called type 1 von Willebrand Disease, the disease-causing genes are not known. Using zebrafish as a model, this project proposes to identify genes that cause the disease by crippling the genes by knockdown methods, and such identification may lead to not only the identification of mutations in the corresponding human genes but also to a better diagnosis.
Date: 2021-08-01/2024-07-31
Creator: Jagadeeswaran, Pudur
Object Type: Text
System: The UNT Digital Library
Metal Oxynitrides: Tuning Metal-N and Metal-O Interactions for Improved Electrocatalytic Properties at the Liquid/Solid Interface (open access)

Metal Oxynitrides: Tuning Metal-N and Metal-O Interactions for Improved Electrocatalytic Properties at the Liquid/Solid Interface

Data management plan for the grant "Metal Oxynitrides: Tuning Metal-N and Metal-O Interactions for Improved Electrocatalytic Properties at the Liquid/Solid Interface." Research investigating the fundamental chemical interactions relevant to the conversion of dinitrogen to ammonia via more energy-efficient routes. The studies will help in understanding the chemical and material factors that are most important for optimizing new materials for ammonia production from dinitrogen, and applications to other important industrial reactions.
Date: 2021-08-01/2024-07-31
Creator: Kelber, Jeffry A.; Cundari, Thomas R., 1964- & D'Souza, Francis
Object Type: Text
System: The UNT Digital Library