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Ectopic Defense Gene Expression Is Associated with Growth Defects in Medicago truncatula Lignin Pathway Mutants (open access)

Ectopic Defense Gene Expression Is Associated with Growth Defects in Medicago truncatula Lignin Pathway Mutants

Article analyzing transposon insertion mutants resulting in independent loss of function of five enzymes of the monolignol pathway, as well as one double mutant, in the model legume Medicago truncatula, to address whether a common mechanism linking lignin modification with perturbations in plant growth and development exists.
Date: July 9, 2019
Creator: Ha, Chan Man; Fine, Dennis; Bhatia, Anil; Rao, Xiaolan; Martin, Madhavi Z.; Engle, Nancy L. et al.
System: The UNT Digital Library
Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass (open access)

Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass

Correction to the previously published article "Multiple levers for overcoming the recalcitrance of lignocellulosic biomass".
Date: February 9, 2019
Creator: Holwerda, Evert; Worthen, Robert; Kothari, Ninad; Lasky, Ronald; Davison, Brian H. (Brian Henry), 1957-; Fu, Chunxiang et al.
System: The UNT Digital Library
A gene based approach to test genetic association based on an optimally weighted combination of multiple traits (open access)

A gene based approach to test genetic association based on an optimally weighted combination of multiple traits

In this article, the authors propose a statistical method by Testing an Optimally Weighted Combination of Multiple traits (TOW-CM) to test the association between multiple traits and multiple variants in a genomic region (a gene or pathway). They investigate the performance of the proposed method through extensive simulation studies. Their simulation studies show that the proposed method has correct type I error rates and is either the most powerful test or comparable with the most powerful tests. Additionally, they illustrate the usefulness of TOW-CM based on a COPDGene study.
Date: August 9, 2019
Creator: Zhang, Jianjun; Sha, Qiuying; Liu, Guanfu & Wang, Xuexia
System: The UNT Digital Library
Correlation consistent basis sets designed for density functional theory: Second-row (Al-Ar) (open access)

Correlation consistent basis sets designed for density functional theory: Second-row (Al-Ar)

Article presenting cc-pV(n+d)Z correlation consistent basis sets of double- through quintuple-ΞΆ quality for the atoms Al-Ar that have been modified for use with density functional theory (DFT). These basis set modifications include truncation of high-angular momentum basis functions, recontraction of the s- and p-functions, and reoptimization of basis function exponents with generalized gradient approximation and hybrid-DFT functionals. The effects of basis set truncation, recontraction, and reoptimization are shown to improve convergence behavior in atomic energies as well as dissociation energies and enthalpies of formation.
Date: June 8, 2019
Creator: Mahler, Andrew; Determan, John J. & Wilson, Angela K.
System: The UNT Digital Library