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Angiogenesis in the Avian Embryo Chorioallantoic Membrane: A Perspective on Research Trends and a Case Study on Toxicant Vascular Effects (open access)

Angiogenesis in the Avian Embryo Chorioallantoic Membrane: A Perspective on Research Trends and a Case Study on Toxicant Vascular Effects

This article considers areas of cardiovascular research that have benefited from studies of the chorioallantoic membrane (CAM), including the themes of investigation of the CAM’s hemodynamic influence on heart and central vessel development, use of the CAM as a model vascular bed for studying angiogenesis, and the CAM as an assay tool.
Date: October 28, 2020
Creator: Burggren, Warren W. & Antich, Maria Rojas
Object Type: Article
System: The UNT Digital Library
Spatial Engineering Direct Cooperativity between Binding Sites for Uranium Sequestration (open access)

Spatial Engineering Direct Cooperativity between Binding Sites for Uranium Sequestration

This article gives a full account of the conceptual and experimental development from randomly distributed functionalities to a convergent arrangement that facilitates cooperative binding is given, thus conferring exceptional affinity toward the analyte of interest. The concept presented here uncovers a new paradigm in the design of efficient sorbent materials by manipulating the spatial distribution to amplify the cooperation of functions.
Date: December 4, 2020
Creator: Sun, Qi; Song, Yanpei; Aguila, Briana; Ivanov, Aleksandr S.; Bryantsev, Vyacheslav S. & Ma, Shengqian
Object Type: Article
System: The UNT Digital Library
The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements (open access)

The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements

Article reporting a chromosome-scale assembly of the T. sinense genome.
Date: December 2, 2020
Creator: Dixon, R. A.; Liu, Ping-Li; Zhang, Xi; Mao, Jian-Feng; Hong, Yan-Ming; Zhang, Ren-Gang et al.
Object Type: Article
System: The UNT Digital Library
Dielectric function of six elemental metals (open access)

Dielectric function of six elemental metals

This article presents an accurate first-principles study of the electronic structure and absorption spectrum of six elemental metals (aluminium, gold, silver, copper, palladium, platinum) using density functional theory in an all-electron full-potential framework.
Date: December 2020
Creator: Pogodaeva, Maria K.; Levchenko, Sergey; Drachev, Vladimir P. & Gabitov, Ildar R.
Object Type: Article
System: The UNT Digital Library
Draft Genome of the Common Snapping Turtle, Chelydra serpentina, a Model for Phenotypic Plasticity in Reptiles (open access)

Draft Genome of the Common Snapping Turtle, Chelydra serpentina, a Model for Phenotypic Plasticity in Reptiles

Article studying climate adaptation using common snapping turtles, Chelydra serpentina, as the model species. The genome and genetic variants identified here provide a foundation for future studies of adaptation to climate.
Date: December 1, 2020
Creator: Crossley, Dane A., II; Das, Debojyoti; Singh, Sunil Kumar; Bierstedt, Jacob; Erickson, Alyssa; Galli, Gina L. J. et al.
Object Type: Article
System: The UNT Digital Library
Existence and nonexistence of radial solutions for semilinear equations with bounded nonlinearities on exterior domains (open access)

Existence and nonexistence of radial solutions for semilinear equations with bounded nonlinearities on exterior domains

Article studies radial solutions of ∆u + K(r)f(u) = 0 on the exterior of the ball of radius R > 0 centered at the origin in ℝᶰ where f is odd with f < 0 on (0, β), f > 0 on (β, δ), f ≡ 0 for u > δ, and where the function K(r) is assumed to be positive and K(r) → 0 as r → ∞.
Date: December 1, 2020
Creator: Iaia, Joseph A.
Object Type: Article
System: The UNT Digital Library
Magnetic confinement of effectively unmagnetized plasma particles (open access)

Magnetic confinement of effectively unmagnetized plasma particles

Article develops a planar model for an artificially structured boundary that may provide magnetic confinement of nonmagnetically trapped plasma particles.
Date: December 1, 2020
Creator: Ordonez, Carlos A.
Object Type: Article
System: The UNT Digital Library
The Arabidopsis PAD4 Lipase-Like Domain Is Sufficient for Resistance to Green Peach Aphid (open access)

The Arabidopsis PAD4 Lipase-Like Domain Is Sufficient for Resistance to Green Peach Aphid

Article exploring PAD4 functions in plant defense by expressing the N-terminal PAD4 lipase-like domain (PAD4ᴸᴸᴰ) without its C-terminal EDS1-PAD4 (EP) domain. The authors show that transgenic expression of PAD4ᴸᴸᴰ in Arabidopsis is sufficient for limiting GPA infestation but not for conferring basal and effector-triggered pathogen immunity. This suggests that the C-terminal PAD4 EP domain is necessary for EDS1-dependent immune functions but is dispensable for aphid resistance. Moreover, PAD4ᴸᴸᴰ is not sufficient to interact with EDS1, indicating the PAD4-EP domain is required for stable heterodimerization. These data provide molecular evidence that PAD4 has domain-specific functions.
Date: December 27, 2019
Creator: Dongus, Joram A.; Bhandari, Deepak D.; Patel, Monika; Archer, Lani; Dijkgraaf, Lucas; Shah, Jyoti et al.
Object Type: Article
System: The UNT Digital Library
Hypoxic level and duration differentially affect embryonic organ system development of the chicken (Gallus gallus) (open access)

Hypoxic level and duration differentially affect embryonic organ system development of the chicken (Gallus gallus)

This article investigates how key organ systems are affected by hypoxia. The results indicated that either modest hypoxia (15% O2) throughout development, or hypoxia at any level during the late stages (d 11 to 18), increased the heart and chorioallantoic membrane weight, which partly compensated for the detrimental effects of hypoxia on embryonic development.
Date: December 11, 2019
Creator: Zhang, H. & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Retinal oxygen supply shaped the functional evolution of the vertebrate eye (open access)

Retinal oxygen supply shaped the functional evolution of the vertebrate eye

Article explores the hypothesis that oxygen diffusion limited the evolution of retinal morphology by reconstructing the evolution of retinal thickness and the various mechanisms for retinal oxygen supply, including capillarization and acid-induced haemoglobin oxygen unloading.
Date: December 10, 2019
Creator: Damsgaard, Christian; Lauridsen, Henrik; Funder, Anette MD; Thomsen, Jesper S.; Desvignes, Thomas; Crossley, Dane A., II et al.
Object Type: Article
System: The UNT Digital Library
Investigation of the mechanical properties of Ni-B/hBN composite coatings electrodeposited in presence of CTAB as the surfactant (open access)

Investigation of the mechanical properties of Ni-B/hBN composite coatings electrodeposited in presence of CTAB as the surfactant

Article investigating the effect of hexadecyltrimethylammonium bromide (CTAB) concentration on the galvanostatic electrodeposition of Ni-B matrix nano hexagonal boron nitride (hBN) reinforced composite coatings.
Date: December 6, 2019
Creator: Karahan, İsmail H. & Tozar, Ali
Object Type: Article
System: The UNT Digital Library
Lignin biosynthesis: old roads revisited and new roads explored (open access)

Lignin biosynthesis: old roads revisited and new roads explored

Article presents several hypothetical models to illustrate information about lignin and the lignification process in plants.
Date: December 4, 2019
Creator: Dixon, R. A. & Barros, Jaime
Object Type: Article
System: The UNT Digital Library
Absorption and emission modulation in a MoS2–GaN (0001) heterostructure by interface phonon–exciton coupling (open access)

Absorption and emission modulation in a MoS2–GaN (0001) heterostructure by interface phonon–exciton coupling

Article reporting the change in the transient absorption characteristics of monolayer MoS2 and the modified PL emission characteristics in a monolayer MoS2–GaN (0001) heterostructure due to the coupling of carriers with the phonon modes and the energy exchange at the interface. The results demonstrate the relevance of interface coupling between the semiconductors for the development of optical and electronic applications.
Date: September 26, 2019
Creator: Poudel, Yuba; Sławińska, Jagoda; Gopal, Priya; Seetharaman, Sairaman; Hennighausen, Zachariah; Kar, Swastik et al.
Object Type: Article
System: The UNT Digital Library
Comments on “What if Cocrystallization Fails for Neutral Molecules? Screening Offered Eutectics as Alternate Pharmaceutical Materials: Leflunomide-A Case Study” (open access)

Comments on “What if Cocrystallization Fails for Neutral Molecules? Screening Offered Eutectics as Alternate Pharmaceutical Materials: Leflunomide-A Case Study”

Features commentary on the previously published article "What if Cocrystallization Fails for Neutral Molecules? Screening Offered Eutectics as Alternate Pharmaceutical Materials: Leflunomide-A Case Study”
Date: December 2019
Creator: Acree, William E. (William Eugene) & Jouyban, Abolghasem
Object Type: Article
System: The UNT Digital Library
Apparent Specific Volumes of Sucrose in Different Aqueous Cosolvent Mixtures at 298.2 K (open access)

Apparent Specific Volumes of Sucrose in Different Aqueous Cosolvent Mixtures at 298.2 K

This article explores research to determine the apparent specific volume of sucrose by measuring the density of sucrose in {cosolvent + water} mixtures at 298.2 K. The study finds that a mean apparent specific volume value of 0.632 cm³.g⁻¹ for sucrose in different aqueous-cosolvent mixtures could be adequate for practical purposes in pharmaceutical industries.
Date: December 30, 2018
Creator: Tinjacá, Darío; Muñoz, María M.; Martínez, Fleming; Jouyban, Abolghasem & Acree, William E. (William Eugene)
Object Type: Article
System: The UNT Digital Library
Foias Numbers (open access)

Foias Numbers

This article identifies the principal features in Foias’ original proof and streamlines them into a general result. The result gives further evidence to the observation that the connection between the sequence with initial seed the Foias constant and the Prime Number Theorem must be fortuitous.
Date: December 30, 2018
Creator: Anghel, Nicolae
Object Type: Article
System: The UNT Digital Library
Beyond the wall: High-throughput quantification of plant soluble and cell-wall bound phenolics by liquid chromatography tandem mass spectrometry (open access)

Beyond the wall: High-throughput quantification of plant soluble and cell-wall bound phenolics by liquid chromatography tandem mass spectrometry

Article describes a study in which a novel high-throughput ultra-high performance liquid chromatography tandem mass spectrometry (UHPLC–MS/MS) method was established to quantify the levels of 19 flavonoids and 15 other phenolic compounds, including acids, aldehydes, and alcohols.
Date: December 26, 2018
Creator: Cocuron, Jean-Christophe; Casas, Maria Isabel; Yang, Fan & Grotewold, Erich
Object Type: Article
System: The UNT Digital Library
Continuum models of the electrochemical diffuse layer in electronic-structure calculations (open access)

Continuum models of the electrochemical diffuse layer in electronic-structure calculations

This article presents a critical comparison of continuum diffuse-layer models that can be coupled to an atomistic first-principles description of the charged metal surface in order to account for the electrolyte screening at electrified interfaces.
Date: August 31, 2018
Creator: Nattino, Francesco; Truscott, Matthew; Marzari, Nicola & Andreussi, Oliviero
Object Type: Article
System: The UNT Digital Library
Peptide signaling molecules CLE5 and CLE6 affect Arabidopsis leaf shape downstream of leaf patterning transcription factors and auxin (open access)

Peptide signaling molecules CLE5 and CLE6 affect Arabidopsis leaf shape downstream of leaf patterning transcription factors and auxin

Article describes a role in Arabidopsis leaf development for two members of the CLAVATA3/ESR‐RELATED peptide family, CLE5 and CLE6, which lie adjacent to each other on chromosome 2.
Date: December 20, 2018
Creator: DiGennaro, Peter; Grienenberger, Etienne; Dao, Thai Q.; Jun, Ji Hyung & Fletcher, Jennifer C.
Object Type: Article
System: The UNT Digital Library
Plasmonically-powered hot carrier induced modulation of light emission in a two-dimensional GaAs semiconductor quantum well (open access)

Plasmonically-powered hot carrier induced modulation of light emission in a two-dimensional GaAs semiconductor quantum well

Article describes an experiment in which a hot-electron-enabled route to controlling light with dissipative loss compensation in semiconductor quantum light emitters has been realized for tunable quantum optoelectronic devices via a two-species plasmon system.
Date: December 10, 2018
Creator: Ashalley, Eric; Gryczynski, Karol; Wang, Zhiming; Salamo, Gregory & Neogi, Arup
Object Type: Article
System: The UNT Digital Library
Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light (open access)

Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light

Article reveal that the systemic transcriptomic response of plants to excess light stress is extensive in the context of systemic acquired acclimation and involves an early (2 min) and transient stage of transcript expression that includes thousands of genes.
Date: December 6, 2018
Creator: Zandalinas, Sara I.; Sengupta, Soham; Burks, David; Azad, Rajeev K. & Mittler, Ron
Object Type: Article
System: The UNT Digital Library
Generalized molecular solvation in non-aqueous solutions by a single parameter implicit solvation scheme (open access)

Generalized molecular solvation in non-aqueous solutions by a single parameter implicit solvation scheme

Article presenting a systematic parametrization protocol for the Self-Consistent Continuum Solvation (SCCS) model resulting in optimized parameters for 67 non-aqueous solvents. The parametrization is based on a collection of ≈6000 experimentally measured partition coefficients, which were collected in the Solv@TUM database presented here. The accuracy of the optimized SCCS model is comparable to the well-known universal continuum solvation model (SMx) family of methods, while relying on only a single fit parameter and thereby largely reducing statistical noise.
Date: August 3, 2018
Creator: Acree, William E. (William Eugene); Hille, Christoph; Ringe, Stefan; Deimel, Martin; Kunkel, Christian; Reuter, Karsten et al.
Object Type: Article
System: The UNT Digital Library
Genome Mining of Plant NPFs Reveals Varying Conservation of Signature Motifs Associated With the Mechanism of Transport (open access)

Genome Mining of Plant NPFs Reveals Varying Conservation of Signature Motifs Associated With the Mechanism of Transport

This article focuses on four structural features of nitrate peptide families/proton-coupled oligopeptide transporters/peptide transporters that have been shown by structural and functional studies to be essential to proton-coupled symport transport.
Date: December 4, 2018
Creator: Longo, Antonella; Miles, Nicholas W. & Dickstein, Rebecca
Object Type: Article
System: The UNT Digital Library
Local and Systemic Metabolic Responses during Light-Induced Rapid Systemic Signaling (open access)

Local and Systemic Metabolic Responses during Light-Induced Rapid Systemic Signaling

This article reports that local application of light stress to one rosette leaf of bolting Arabidopsis (Arabidopsis thaliana) plants resulted in a metabolic response that encompassed local, systemic and transport tissues, demonstrating a high degree of physical and metabolic continuity between different tissues throughout the plant.
Date: December 2018
Creator: Choudhury, Feroza K.; Devireddy, Amith R.; Azad, Rajeev K.; Shulaev, Vladimir & Mittler, Ron
Object Type: Article
System: The UNT Digital Library