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An “ideal lignin” facilitates full biomass utilization (open access)

An “ideal lignin” facilitates full biomass utilization

This article describes the ideal nature of the Catechyl lignin (C-lignin) via a revised compositional characterization of the vanilla seed coat fiber, new features of the C-lignin's reactivity and stability, and successful attempts at converting it to monomers in near-quantitative yields.
Date: September 28, 2018
Creator: Li, Yanding; Shuai, Li; Kim, Hoon; Hussain Motagamwala, Ali; Mobley, Justin K.; Yue, Fengxia et al.
Object Type: Article
System: The UNT Digital Library
Identification of bottlenecks in the accumulation of cyclic fatty acids in camelina seed oil (open access)

Identification of bottlenecks in the accumulation of cyclic fatty acids in camelina seed oil

This article proposes a model for the accumulation of substantial levels of cyclopropane fatty acids (CPA) in camelina, and discusses the differences between CPA accumulation in camelina and Arabidopsis.
Date: July 10, 2017
Creator: Yu, Xiao-Hong; Cahoon, Rebecca E.; Horn, Patrick J.; Shi, Hai; Prakash, Richa R.; Cai, Yuanheng et al.
Object Type: Article
System: The UNT Digital Library
Improved Campephiline detection: An experiment conducted with the Magellanic Woodpecker (open access)

Improved Campephiline detection: An experiment conducted with the Magellanic Woodpecker

Article describes a study which tried to determine which of three methods (useing a drumming device to simulate a double‐knock (i.e., territorial acoustical signal), broadcasting a territorial call, or passively listening) best results in a detection of Magellanic Woodpeckers (Campephilus magellanicus ), and if weather variables influence detection probability.
Date: September 27, 2019
Creator: Wynia, Amy L.; Rolland, Virginie & Jiménez, Jaime E.
Object Type: Article
System: The UNT Digital Library
IRES Track II - Cape Horn ASIs: Climate change and disease ecology at the southern end of the Americas (open access)

IRES Track II - Cape Horn ASIs: Climate change and disease ecology at the southern end of the Americas

Data management plan for the grant "IRES Track II - Cape Horn ASIs: Climate change and disease ecology at the southern end of the Americas." Research giving students the opportunity to be trained in quantitative experimental design and work as part of a multinational research collaboration to study infectious disease emergence in one of the few remaining pristine places on Earth. The Cape Horn Biosphere Reserve (CHBR) off the southern tip of South America protects pristine ecosystem is perfect for this type of graduate student training. The CHBR is part of the sub-Antarctic Magellanic ecoregion, which is globally significant because it houses the worlds southernmost forest biome, contains numerous endemic species, is remote, and is relatively free of anthropogenic impacts. The research questions themselves will be flexible, but organized thematically. Specifically, this IRES Track-II will focus on the merging molecular genetic analysis using a mobile next generation sequencing lab with mist netting and arthropod trapping to investigate the impacts of wildlife disease on local biodiversity and community structure. Secondarily, eDNA and traditional wildlife disease monitoring approaches will be applied to understand the potential for zoonosis and understanding ecological factors that contribute to, or inhibit, zoonosis. Resultantly, participation in this program …
Date: 2021-09-01/2024-08-31
Creator: Gregory, Andrew; Kennedy, James H. & Rozzi, Ricardo, 1960-
Object Type: Text
System: The UNT Digital Library
A Laser Microdissection System to Enhance Agricultural and Food Research in the North Texas and Southern Oklahoma Region (open access)

A Laser Microdissection System to Enhance Agricultural and Food Research in the North Texas and Southern Oklahoma Region

Data management plan for the grant, "A Laser Microdissection System to Enhance Agricultural and Food Research in the North Texas and Southern Oklahoma Region."
Date: 2023-09-01/2027-08-31
Creator: Ayre, Brian G.
Object Type: Text
System: The UNT Digital Library
Long-range nonspreading propagation of sound beam through periodic layered structure (open access)

Long-range nonspreading propagation of sound beam through periodic layered structure

Article analyzing dispersion of sound in a solid-fluid layered structure and found a flex point on the isofrequency curve where D vanishes for given direction of propagation and frequency. Nonspreading propagation is experimentally observed in a water steel lattice of 75 periods (~1 meter long) and occurs in the regime of anomalous dispersion and strong acoustic anisotropy when the effective mass along periodicity is close to zero. Under these conditions the incoming beam experiences negative refraction of phase velocity leading to backward wave propagation. The observed effect is explained using a complete set of dynamical equations and our effective medium theory.
Date: September 2, 2020
Creator: Zubov, Yurii; Djafari-Rouhani, Bahram; Jin, Yuqi; Sofield, Mathew; Walker, Ezekiel; Neogi, Arup et al.
Object Type: Article
System: The UNT Digital Library
Low-Energy Atomic Processes Including Ones Involving a Positron (open access)

Low-Energy Atomic Processes Including Ones Involving a Positron

Data management plan for the grant, "Low-Energy Atomic Processes Including Ones Involving a Positron." The proposed research in theoretical atomic physics involves few-body systems of charged particles, especially ones that involve the antiparticle of the electron, which is a positron. One of these systems is the positronium negative ion, which is comprised of two electrons and a positron. The exotic positronium atom is similar to the conventional hydrogen atom, but the positive charge in the atom is a positron rather than a proton. The proposed studies of these few-body charged systems will support international collaborations with scientists in the UK and Japan.
Date: 2022-09-01/2025-08-31
Creator: Quintanilla, Sandra J.
Object Type: Text
System: The UNT Digital Library
Mechanical Properties of Chemically Modified Clay (open access)

Mechanical Properties of Chemically Modified Clay

Article uses first principles methods to compare the mechanical properties of lizardite Mg3(Si2O5)(OH)4, a polymorph of serpentine family, with the new compounds derived by substituting Mg ions with isovalent elements from different chemical groups.
Date: September 23, 2019
Creator: Gusmão, M. S.; Gopal, Priya; Siloi, Ilaria; Curtarolo, Stefano; Fornari, Marco & Buongiorno Nardelli, Marco
Object Type: Article
System: The UNT Digital Library
Metal-organic framework nanocrystal-derived hollow porousmaterials: Synthetic strategies and emerging applications (open access)

Metal-organic framework nanocrystal-derived hollow porousmaterials: Synthetic strategies and emerging applications

Article discusses how the fascinating, functional properties and applications of MOF-derived hollow porous materials primarily lie in their chemical composition, hollow character, and unique porous structure. The authors discuss a comprehensive overview of the synthetic strategies and emerging applications of hollow porous materials derived from MOF-based templates and/or precursors.
Date: September 13, 2022
Creator: Lui, Xiaolu; Verma, Guarav; Chen, Zhongshan; Hu, Baowei; Huang, Qifei; Yang, Hui et al.
Object Type: Article
System: The UNT Digital Library
Metallic nanoparticle production and exposure/deposition system for toxicological research applications using zebrafish (open access)

Metallic nanoparticle production and exposure/deposition system for toxicological research applications using zebrafish

Article presents a method that provides a novel way to synthesize NPs and expose biological organisms for various toxicological analysis.
Date: September 3, 2020
Creator: Nayek, Subhayu; Aguilar, Roberto; Juel, Lauren A. & Verbeck, Guido F.
Object Type: Article
System: The UNT Digital Library
A Miniature Permanent Magnet Assembly with Localized and Uniform Field with an Application to Optical Pumping of Helium (open access)

A Miniature Permanent Magnet Assembly with Localized and Uniform Field with an Application to Optical Pumping of Helium

Article using simulations and experimental measurements to design, build, and test a compact and uniform magnetic field source and then apply it to the optical pumping of atomic helium.
Date: September 24, 2021
Creator: Cameron, Garnet; Cuevas, Jonathan; Pound, Jeffrey Jr. & Shiner, David
Object Type: Article
System: The UNT Digital Library
Multi-omic characterization of bifunctional peroxidase 4-coumarate 3-hydroxylase knockdown in Brachypodium distachyon provides insights into lignin modification associated pleiotropic effects (open access)

Multi-omic characterization of bifunctional peroxidase 4-coumarate 3-hydroxylase knockdown in Brachypodium distachyon provides insights into lignin modification associated pleiotropic effects

Article discusses how a bifunctional peroxidase enzyme, 4-coumarate 3-hydroxylase (C3H/APX), provides a parallel route to the shikimate shunt pathway for the conversion of 4-coumarate to caffeate in the early steps of lignin biosynthesis. Here, a multi-omic approach was used to characterize molecular changes resulting from C3H/APX-KD associated lignin modification and negative growth phenotype in Brachypodium distachyon.
Date: September 28, 2022
Creator: Shrestha, Him K.; Fichman, Yosef; Engle, Nancy L.; Tschaplinski, Timothy J.; Mittler, Ron; Dixon, R. A. et al.
Object Type: Article
System: The UNT Digital Library
New reactions of diazene and related species for modelling combustion of amine fuels (open access)

New reactions of diazene and related species for modelling combustion of amine fuels

Article discusses how potential energy surfaces for reactions involving N2H2 isomers of diazene (diimide) have been explored using density functional theory, with energies based on coupled-cluster theory. A focus is on processes that create or consume these species, and isomerization between the E (trans) and Z (cis) forms of HNNH. This is the accepted manuscript version of the published article.
Date: September 24, 2021
Creator: Marshall, Paul; Rawling, George R. & Glarborg, Peter
Object Type: Article
System: The UNT Digital Library
Nonlinear frequency analysis of porous Bi directional functionally graded beams utilizing reddy shear deformation theory (open access)

Nonlinear frequency analysis of porous Bi directional functionally graded beams utilizing reddy shear deformation theory

Article describes how the nonlinear frequency response of bi-directional functionally graded porous beams experienced range of various end conditions is investigated in this work. The findings are presented to aid in future research into the effects of various gradient indices, vibration amplitude ratios, porosity coefficients, shear and elastic substrate parameters, boundary conditions, and vibration frequencies on the bi-directional functionally graded beams.
Date: September 3, 2023
Creator: Forghani, Mohammadamin; Bazarganlari, Yousef; Zahedinejad, Parham & Kazemzadeh-Parsi, Mohammad Javad
Object Type: Article
System: The UNT Digital Library
Object-Oriented Canopy Gap Extraction from UAV Images Based on Edge Enhancement (open access)

Object-Oriented Canopy Gap Extraction from UAV Images Based on Edge Enhancement

Article describes the efficient and accurate identification of canopy gaps is the basis of forest ecosystem research, which is of great significance to further forest monitoring and management. One major limitation of the traditional methods of remote sensing to map canopy gaps is that they cannot finely extract the complex edges of canopy gaps in mountainous areas. The authors proposed an object-oriented classification method that integrates multi-source information.
Date: September 23, 2022
Creator: Xia, Jisheng; Wang, Yutong; Dong, Pinliang; He, Shijun; Zhao, Fei & Luan, Guize
Object Type: Article
System: The UNT Digital Library
The osmorespiratory compromise in the euryhaline killifish: water regulation during hypoxia (open access)

The osmorespiratory compromise in the euryhaline killifish: water regulation during hypoxia

Article studying water regulation during hypoxia in euryhaline killifish.
Date: September 24, 2019
Creator: Mager, Edward M.; Wood, Chris M.; Ruhr, Ilan M.; Schauer, Kevin L.; Wang, Yadong; McDonald, M. Danielle et al.
Object Type: Article
System: The UNT Digital Library
Parametric nondifferentiable multiobjective fractional programming under (b;Ψ; Φ; ρ)-univexity (open access)

Parametric nondifferentiable multiobjective fractional programming under (b;Ψ; Φ; ρ)-univexity

This article is concerned with optimality conditions and duality results for nondifferentiable multi-objective fractional programming problems.
Date: September 27, 2018
Creator: Antczak, Tadeusz & Verma, Ram U.
Object Type: Article
System: The UNT Digital Library
Parental stressor exposure simultaneously conveys both adaptive and maladaptive larval phenotypes through epigenetic inheritance in the zebrafish (Danio rerio) (open access)

Parental stressor exposure simultaneously conveys both adaptive and maladaptive larval phenotypes through epigenetic inheritance in the zebrafish (Danio rerio)

This article is a study using crude oil as an example of an environmental stressor in adult zebrafish. The offspring obtained were then assessed for transgenerational epigenetic transfer of oil-induced phenotypes. The authors conclude that epigenetic transgenerational inheritance can lead to an immediate and simultaneous inheritance of both beneficial and maladaptive traits in a large proportion of the F1 larvae. The adaptive responses may help fish populations survive when facing transient environmental stressors.
Date: September 5, 2019
Creator: Bautista, Naim M. & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Plasmon coupled super- and sub- radiance from dye shells (open access)

Plasmon coupled super- and sub- radiance from dye shells

Article investigates cooperative spontaneous emission, theoretically and experimentally, for an ensemble of emitters coupled to a core-shell structure.
Date: September 2018
Creator: de Silva, Vashista C.; Moazzezi, Mojtaba; Rostovtsev, Yuri V. & Drachev, Vladimir P.
Object Type: Article
System: The UNT Digital Library
Prostasin and hepatocyte growth factor B in factor VIIa generation: Serine protease knockdowns in zebrafish (open access)

Prostasin and hepatocyte growth factor B in factor VIIa generation: Serine protease knockdowns in zebrafish

Article aims to identify other proteases that may activate FVII using zebrafish as a model.
Date: September 22, 2020
Creator: Khandekar, Gauri; Iyer, Neha & Jagadeeswaran, Pudur
Object Type: Article
System: The UNT Digital Library
Quantitative PCR Primer Development for Early Detection of Invasive Species (open access)

Quantitative PCR Primer Development for Early Detection of Invasive Species

Data management plan for the grant, "Quantitative PCR Primer Development for Early Detection of Invasive Species."
Date: 2023-09-01/2026-08-31
Creator: Compson, Zacchaeus Greg
Object Type: Text
System: The UNT Digital Library
Re-engineering Plant Phenylpropanoid Metabolism With the Aid of Synthetic Biosensors (open access)

Re-engineering Plant Phenylpropanoid Metabolism With the Aid of Synthetic Biosensors

Article that provides a brief overview of current research on synthetic biology and metabolic engineering approaches to control phenylpropanoid synthesis and phenylpropanoid-related biosensors, advocating for the use of biosensors and genetic circuits as a step forward in plant synthetic biology to develop autonomously-controlled phenylpropanoid-producing plant biofactories.
Date: September 16, 2021
Creator: Ferreira, Savio S. & Antunes, Mauricio S.
Object Type: Article
System: The UNT Digital Library
Reduced structural flexibility for an exonuclease deficient DNA polymerase III mutant (open access)

Reduced structural flexibility for an exonuclease deficient DNA polymerase III mutant

This article reports on the dynamics of E coli DNA polymerase III proofreading in the presence of its processivity factor, the β₂-sliding clamp, at varying base pair termini using single-molecule FRET.
Date: June 29, 2018
Creator: Gahlon, Hailey L.; Walker, Alice R.; Cisneros, Gerardo Andrés; Lamers, Meindert H. & Rueda, David S.
Object Type: Article
System: The UNT Digital Library
Revisiting surface core-level shifts for ionic compounds (open access)

Revisiting surface core-level shifts for ionic compounds

Article establishing a theoretical method which is able to relate the binding energy shifts to the electronic structure of a material. In order to establish such a methodology, the CaO(100) surface to bulk core-level binding energy shifts are studied with Hartree-Fock and density-functional theory methods using both cluster and periodic slab models.
Date: September 12, 2019
Creator: Bagus, Paul S.; Nelin, Connie J.; Zhao, Xunhua; Levchenko, Sergey V.; Davis, Earl; Weng, Xuefei et al.
Object Type: Article
System: The UNT Digital Library