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Developmental thyroid disruption causes long-term impacts on immune cell function and transcriptional responses to pathogen in a small fish model (open access)

Developmental thyroid disruption causes long-term impacts on immune cell function and transcriptional responses to pathogen in a small fish model

This article explores the connection between thyroid hormones (THs) and immune systems in fish. This article is noteworthy as disruption of the thyroid system during development, which can occur in response to chemicals present in the environment, may have lasting effects on immune function in adulthood for fish.
Date: July 14, 2021
Creator: Thornton Hampton, Leah M.; Finch, Miranda G.; Martyniuk, Christopher J.; Venables, Barney J. & Jeffries, Marlo K. Sellin
Object Type: Article
System: The UNT Digital Library
Knockdown screening of chromatin binding and regulatory proteins in zebrafish identified Suz12b as a regulator of tfpia and an antithrombotic drug target (open access)

Knockdown screening of chromatin binding and regulatory proteins in zebrafish identified Suz12b as a regulator of tfpia and an antithrombotic drug target

Article identifying novel epigenetic regulators for tfpia and exploiting this information to discover a drug that enhances tfpia mRNA levels and prolongation of TTO. This discovery provides the basis for testing whether UNC6852 could be used as an antithrombotic drug.
Date: July 27, 2021
Creator: Raman, Revathi; Fallatah, Weam; Al Qaryoute, Ayah; Dhinoja, Sanchi & Jagadeeswaran, Pudur
Object Type: Article
System: The UNT Digital Library
Rational design of bifunctional conjugated microporous polymers (open access)

Rational design of bifunctional conjugated microporous polymers

This article is a review discussing the rational design and synthesis of bifunctional conjugated microporous polymers (CMPs), summarizes their advanced applications, and concludes with the authors' perspectives on the research prospects of these materials.
Date: July 22, 2021
Creator: Song, Yanpei; Lan, Pui Ching; Martin, Kyle & Ma, Shengqian
Object Type: Article
System: The UNT Digital Library
Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network (open access)

Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network

Article discovering a mechanism for how sphingolipids mediate phosphoinositide homeostasis at the TGN in plant cells. The data presented identifies a mode of action of sphingolipids in lipid interplay at the TGN during protein sorting.
Date: July 13, 2021
Creator: Ito, Yoko; Esnay, Nicolas; Platre, Matthieu Pierre; Wattelet-Boyer, Valérie; Noack, Lise C.; Fougère, Louise et al.
Object Type: Article
System: The UNT Digital Library
Expanding A Bilingual Trauma-Based Behavioral Health Workforce in Integrated Health Settings (open access)

Expanding A Bilingual Trauma-Based Behavioral Health Workforce in Integrated Health Settings

Data management plan for the grant "Expanding A Bilingual Trauma-Based Behavioral Health Workforce in Integrated Health Settings."
Date: 2021-07-01/2022-06-30
Creator: Ceballos, Peggy; Carey, Chandra Donnell; Cartwright, Angie D. & Mukherjee, Dhrubodhi
Object Type: Text
System: The UNT Digital Library
Optimization for Thermal Protection of Firefighter’s Glove by Phase Change Material (open access)

Optimization for Thermal Protection of Firefighter’s Glove by Phase Change Material

Data management plan for the grant "Optimization for Thermal Protection of Firefighter’s Glove by Phase Change Material." Research project investigating improvements to firefighers gloves thermal protection.
Date: 2021-07-01/2023-06-30
Creator: Zhao, Weihuan
Object Type: Text
System: The UNT Digital Library
In silico guided structural and functional analysis of genes with potential involvement in resistance to coffee leaf rust: A functional marker based approach (open access)

In silico guided structural and functional analysis of genes with potential involvement in resistance to coffee leaf rust: A functional marker based approach

Article presents novel insights into the molecular nature of the SH genes, thereby opening new avenues for coffee rust resistance molecular breeding.
Date: July 8, 2020
Creator: Ferreira, Svio Siqueira; Barka, Geleta Dugassa; Caixeta, Eveline Teixeira & Zambolim, Larcio
Object Type: Article
System: The UNT Digital Library
Lipophilic signals lead to organ-specific gene expression changes in Arabidopsis seedlings (open access)

Lipophilic signals lead to organ-specific gene expression changes in Arabidopsis seedlings

Article presents a study where whole transcriptome sequencing (RNA-seq) and differential expression analysis were used to identify early (1–3 hr) transcriptional changes induced by the exogenous treatment of NAE 18:2 and NAE 18:3 in cotyledons, roots, and seedlings.
Date: July 15, 2020
Creator: Cannon, Ashley E.; Yan, Chengshi; Burks, David J.; Rao, Xiaolan; Azad, Rajeev K. & Chapman, Kent Dean
Object Type: Article
System: The UNT Digital Library
Leaf Lipid Alterations in Response to Heat Stress of Arabidopsis thaliana (open access)

Leaf Lipid Alterations in Response to Heat Stress of Arabidopsis thaliana

Article measuring lipid levels with mass spectrometry to confirm the previously observed changes in Arabidopsis thaliana leaf lipids under three heat stress regimens. Additionally, in response to heat, increased oxidation of the fatty acyl chains of leaf galactolipids, sulfoquinovosyldiacylglycerols, and phosphatidylglycerols, and incorporation of oxidized acyl chains into acylated monogalactosyldiacylglycerols are shown. The authors also observed increased levels of digalactosylmonoacylglycerols and monogalactosylmonoacylglycerols. The hypothesis that a defect in sterol glycosylation would adversely affect regrowth of plants after a severe heat stress regimen was tested, but differences between wild-type and sterol glycosylation-defective plants were not detected.
Date: July 4, 2020
Creator: Shiva, Sunitha; Samarakoon, Thilani; Lowe, Kaleb A.; Roach, Charles; Vu, Hieu Sy; Colter, Madeline et al.
Object Type: Article
System: The UNT Digital Library
SEIPIN Isoforms Interact with the Membrane-Tethering Protein VAP27-1 for Lipid Droplet Formation (open access)

SEIPIN Isoforms Interact with the Membrane-Tethering Protein VAP27-1 for Lipid Droplet Formation

Article demonstrating that part of the function of two SEIPIN isoforms in Arabidopsis (Arabidopsis thaliana), AtSEIPIN2 and AtSEIPIN3, may depend on their interaction with the vesicle-associated membrane protein (VAMP)–associated protein (VAP) family member AtVAP27-1. The authors used a combination of biochemical, cell biology, and genetics approaches to show that AtVAP27-1 interacts with the N termini of AtSEIPIN2 and AtSEIPIN3 and likely supports the normal formation of LDs. This insight indicates that the ER membrane tethering machinery in plant cells could play a role with select SEIPIN isoforms in LD biogenesis at the ER, and additional experimental evidence in Saccharomyces cerevisiae supports the possibility that this interaction may be important in other eukaryotic systems.
Date: July 20, 2020
Creator: Greer, Michael Scott; Cai, Yingqi; Gidda, Satinder K.; Esnay, Nicolas; Kretzschmar, Franziska K.; Seay, Damien C. et al.
Object Type: Article
System: The UNT Digital Library
Multitask deep-learning-based design of chiral plasmonic metamaterials (open access)

Multitask deep-learning-based design of chiral plasmonic metamaterials

This article presents an end-to-end functional bidirectional deep-learning (DL) model for three-dimensional chiral metamaterial design and optimization. This ML model utilizes multitask joint learning features to recognize, generalize, and explore in detail the nontrivial relationship between the metamaterials’ geometry and their chiroptical response, eliminating the need for auxiliary networks or equivalent approaches to stabilize the physically relevant output. This model efficiently realizes both forward and inverse retrieval tasks with great precision, offering a promising tool for iterative computational design tasks in complex physical systems. Other potential applications include photodetectors, polarization-resolved imaging, and circular dichroism (CD) spectroscopy.
Date: July 1, 2020
Creator: Ashalley, Eric; Acheampong, Kingsley; Besteiro, Lucas V.; Yu, Peng; Neogi, Arup; Govorov, Alexander O. et al.
Object Type: Article
System: The UNT Digital Library
Reference materials for phase equilibrium studies. 1. Liquid–liquid equilibria (IUPAC Technical Report) (open access)

Reference materials for phase equilibrium studies. 1. Liquid–liquid equilibria (IUPAC Technical Report)

This article is the first of three projected IUPAC Technical Reports resulting from IUPAC Project 2011-037-2-100 (Reference Materials for Phase Equilibrium Studies). This report proposes seven systems for liquid–liquid equilibrium studies, covering the four most common categories of binary mixtures: aqueous systems of moderate solubility, non-aqueous systems, systems with low solubility, and systems with ionic liquids.
Date: July 8, 2021
Creator: Bazyleva, Ala; Acree, William E. (William Eugene); Chirico, Robert D.; Diky, Vladimir; Hefter, Glenn T.; Jacquemin, Johan et al.
Object Type: Article
System: The UNT Digital Library
Structural Modeling and in planta Complementation Studies Link Mutated Residues of the Medicago truncatula Nitrate Transporter NPF1.7 to Functionality in Root Nodules (open access)

Structural Modeling and in planta Complementation Studies Link Mutated Residues of the Medicago truncatula Nitrate Transporter NPF1.7 to Functionality in Root Nodules

This article combines in silico structural predictions with in planta complementation of the severely defective mtnip-1 mutant plants to understand the role of a series of distinct amino acids in the transporter’s function. The findings add to the knowledge of the mechanism of alternative conformational changes as well as symport transport in NPFs and enhance knowledge of the mechanisms for nitrate signaling.
Date: July 1, 2021
Creator: Yu, Yao-Chuan; Dickstein, Rebecca & Longo, Antonella
Object Type: Article
System: The UNT Digital Library
Metal Organic Frameworks Containing Frustrated Lewis Pairs for Hydrogen Storage at Ambient Temperature (open access)

Metal Organic Frameworks Containing Frustrated Lewis Pairs for Hydrogen Storage at Ambient Temperature

Data Management Plan for the research project: Metal Organic Frameworks Containing Frustrated Lewis Pairs for Hydrogen Storage at Ambient Temperature. Research to design, synthesize, and characterize novel sorbent materials for hydrogen storage. The materials are based on a Metal-Organic Framework and incorporate Frustrated Lewis Pairs (FLP-MOF). The project seeks to optimize the hydrogen storage capacity of the FLP-MOF systems at ambient temperature and under high pressure.
Date: 2021-07-01/2024-06-30
Creator: Ma, Shengqian
Object Type: Text
System: The UNT Digital Library
Connecting Galaxies and Supermassive Black Holes: Meso-scale Simulations of Multiphase Accretion Flows (open access)

Connecting Galaxies and Supermassive Black Holes: Meso-scale Simulations of Multiphase Accretion Flows

Data management plan for the grant, "Connecting Galaxies and Supermassive Black Holes: Meso-scale Simulations of Multiphase Accretion Flows." It proposes to study how gas flows onto the supermassive black holes in massive galaxies and galaxy clusters. They will perform numerical simulations with a nested zoom-in technique, focusing on the mesoscale accretion flows from the Bondi radius to hundreds of Schwarzschild radii. They will predict the mass flux of different phases, as well as their angular momentum and magnetic flux.
Date: 2022-07-01/2025-06-30
Creator: Li, Yuan
Object Type: Text
System: The UNT Digital Library
Seedling Chloroplast Responses Induced by N-Linolenoylethanolamine Require Intact G-Protein Complexes (open access)

Seedling Chloroplast Responses Induced by N-Linolenoylethanolamine Require Intact G-Protein Complexes

This article shows that the activity of N-linolenoylethanolamine (NAE 18:3) requires an intact G-protein complex. Specifically, genetic ablation of the Gβγ dimer or loss of the full set of atypical Gα subunits strongly attenuates an NAE-18:3–induced degreening of cotyledons in Arabidopsis (Arabidopsis thaliana) seedlings. This effect involves, at least in part, transcriptional regulation of chlorophyll biosynthesis and catabolism genes. In addition, there is feedforward transcriptional control of G-protein signaling components and G-protein interactors. These results are consistent with NAE 18:3 being a lipid signaling molecule in plants with a requirement for G-proteins to mediate signal transduction, a situation similar, but not identical, to the action of NAE endocannabinoids in animal systems.
Date: July 14, 2020
Creator: Yan, Chengshi; Cannon, Ashley E.; Watkins, Justin; Keereetaweep, Jantana; Khan, Bibi Rafeiza; Jones, Alan M. et al.
Object Type: Article
System: The UNT Digital Library
MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation (open access)

MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation

This article explores the relationship among MYB30, the ROS wave, and systemic acclimation in Arabidopsis by determining the SAA response to HL stress of MYB30 mutants and wild-type plants.
Date: July 22, 2020
Creator: Fichman, Yosef; Zandalinas, Sara I.; Sengupta, Soham; Burks, David J.; Meyers, Ronald J., Jr.; Azad, Rajeev K. et al.
Object Type: Article
System: The UNT Digital Library
Universality in a one-dimensional three-body system (open access)

Universality in a one-dimensional three-body system

Article studying a heavy-heavy-light three-body system confined to one space dimension.
Date: July 24, 2019
Creator: Happ, Lucas; Zimmermann, Matthias; Betelu, Santiago I.; Schleich, Wolfgang P. & Efremov, Maxim A.
Object Type: Article
System: The UNT Digital Library
AFLOW-QHA3P: Robust and automated method to compute thermodynamic properties of solids (open access)

AFLOW-QHA3P: Robust and automated method to compute thermodynamic properties of solids

Article introducing the quasiharmonic approximation three-phonon method to calculate the thermodynamic properties of both nonmetallic and metallic compounds. This study demonstrates that QHA3P is an ideal framework for the high-throughput prediction of finite-temperature material properties, combining the accuracy of QHA with the computational efficiency of SC-QHA.
Date: July 8, 2019
Creator: Nath, Pinku; Usanmaz, Demet; Hicks, David; Oses, Corey; Fornari, Marco; Buongiorno Nardelli, Marco et al.
Object Type: Article
System: The UNT Digital Library
Nematic order on a deformable vesicle with anchoring effects (open access)

Nematic order on a deformable vesicle with anchoring effects

This article proposes a new model to represent a vesicle membrane with internal nematic order whose equilibrium states depend on the competition between the bending, elastic and anchoring energies.
Date: July 7, 2020
Creator: Tierra Chica, Giordano; Guillén-González, Francisco & Rodríguez-Bellido, María Ángeles
Object Type: Article
System: The UNT Digital Library
Relating size and functionality in human social networks through complexity (open access)

Relating size and functionality in human social networks through complexity

Article argues that the Dunbar number arises as a consequence of a natural phase transition in the dynamic self-organization among N individuals within a social system. The authors provide a theoretical basis for the value of the Dunbar number and establish a theory-based bridge spanning the gap between sociology and psychology.
Date: July 20, 2020
Creator: Massari, Giovanni F.; Culbreth, Garland; Failla, Roberto; Grigolini, Paolo; West, Bruce J. & Bologna, Mauro
Object Type: Article
System: The UNT Digital Library
Finding new friends and revisiting old ones – how plant lipid droplets connect with other subcellular structures (open access)

Finding new friends and revisiting old ones – how plant lipid droplets connect with other subcellular structures

Article talks about how the number of described contact sites between different subcellular compartments and structures in eukaryotic cells has increased dramatically in recent years, which has substantially reinforced the well-known premise that these kinds of connections are essential for overall cellular organization. The authors discuss contact sites involving plant lipid droplets (LDs), including LD-endoplasmic reticulum (ER) connections that mediate the biogenesis of new LDs at the ER, LD-peroxisome connections.
Date: July 18, 2022
Creator: Scholz, Patricia; Chapman, Kent Dean; Mullen, Robert T. & Ischebeck, Till
Object Type: Article
System: The UNT Digital Library
Unsymmetric Pentacene- and Pentacenequinone-Fused Porphyrins: Understanding the Effect of Cross- and Linear-Conjugation (open access)

Unsymmetric Pentacene- and Pentacenequinone-Fused Porphyrins: Understanding the Effect of Cross- and Linear-Conjugation

Article says that unsymmetric pentacenequinone-fused (cross-conjugated) and pentacene-fused (linear-conjugated) porphyrins were designed and synthesized. This work provides important and useful information on guiding new material designs.
Date: July 29, 2022
Creator: Moss, Austen; Nevonen, Dustin E.; Hu, Yi; Nesterov, Vladimir N.; Nemykin, Victor N. & Wang, Hong
Object Type: Article
System: The UNT Digital Library
Retraction Note: Gold Nanoparticles‑enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells (open access)

Retraction Note: Gold Nanoparticles‑enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells

The editors have retracted their article Gold Nanoparticles-enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells. Concerns were brought to the attention of the Editors with respect to apparent inappropriate manipulation of the data in seven of the nine panels shown in Figure 7. The Editors no longer have confidence in the data reported in this Article.
Date: July 5, 2022
Creator: Farooq, Muhammad U.; Novosad, Valentyn; Rozhkova, Elena A.; Wali, Hussain; Ali, Asghar; Fateh, Ahmed A. et al.
Object Type: Article
System: The UNT Digital Library