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Commentary on “Experimental Measurements and Equilibrium Study of Functional D-Sorbitol in Good and Anti-Solvent Binary Mixtures” (open access)

Commentary on “Experimental Measurements and Equilibrium Study of Functional D-Sorbitol in Good and Anti-Solvent Binary Mixtures”

This article provides a commentary on the published equation coefficients for mathematically describing the solubility behavior of D-sorbitol in binary acetonitrile + ethanol solvent mixtures using the modified Apelblat, Combined Nearly Ideal Binary Solvent/Redlich-Kister (CNIBS/R-K) and Jouyban-Acree models.
Date: June 17, 2017
Creator: Acree, William E. (William Eugene)
Object Type: Article
System: The UNT Digital Library
Commentary on “Studies on Molar Volume, Dielectric Properties and Refractive Indices of Cyanex 923 + Benzene/Xylene at 300 K” (open access)

Commentary on “Studies on Molar Volume, Dielectric Properties and Refractive Indices of Cyanex 923 + Benzene/Xylene at 300 K”

This article provides a commentary on Redlich-Kister equation coefficients for binary benzene + cyanex 923 and xylene + cyanex 923.
Date: June 21, 2017
Creator: Acree, William E. (William Eugene)
Object Type: Article
System: The UNT Digital Library
Hypoxia-induced reprogramming of the cardiac phenotype in American alligators (Alligator mississippiensis) revealed by quantitative proteomics (open access)

Hypoxia-induced reprogramming of the cardiac phenotype in American alligators (Alligator mississippiensis) revealed by quantitative proteomics

Article describes study which tested if targeted and persistent changes in steady-state protein expression underlie this hypoxic heart phenotype, using isobaric tags for relative and absolute quantitation (iTRAQ) proteomics.
Date: June 13, 2019
Creator: Alderman, Sarah L.; Crossley, Dane A., II; Elsey, Ruth M. & Gillis, Todd E.
Object Type: Article
System: The UNT Digital Library
Metabolic and transcriptomic study of pennycress natural variation identifies targets for oil improvement (open access)

Metabolic and transcriptomic study of pennycress natural variation identifies targets for oil improvement

Article describes how, although pennycress, a winter annual, could be grown as a dedicated bioenergy crop, an increase in its seed oil content is required to improve its economic competitiveness. In this work, the authors combined biomass composition with metabolomic and transcriptomic studies of developing embryos from 22 pennycress natural variants to identify targets for oil improvement.
Date: June 19, 2023
Creator: Arias, Cintia Lucía; García Navarrete, Leidy Tatiana; Mukundi, Eric; Swanson, Tyler; Yang, Fan; Hernandez, Jonathan et al.
Object Type: Article
System: The UNT Digital Library
Dioxygen: What Makes This Triplet Diradical Kinetically Persistent? (open access)

Dioxygen: What Makes This Triplet Diradical Kinetically Persistent?

This article examines experimental heats of formation and enthalpies obtained from G4 calculations to find that the resonance stabilization of the two unpaired electrons in triplet O₂, relative to the unpaired electrons in two hydroxyl radicals, amounts to 100 kcal/mol.
Date: June 14, 2017
Creator: Borden, Weston T.; Hoffmann, Roald; Stuyver, Thijs & Chen, Bo
Object Type: Article
System: The UNT Digital Library
Developmental Physiology: Grand Challenges (open access)

Developmental Physiology: Grand Challenges

Article indicating directions in which the field of Developmental Physiology might move. It suggests three categories of challenges: demonstrating broad relevance, promoting conceptual advances, and improving experimental approaches.
Date: June 10, 2021
Creator: Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Non-Genetic Inheritance of Hypoxia Tolerance in Fishes: Dynamics and Mechanisms (open access)

Non-Genetic Inheritance of Hypoxia Tolerance in Fishes: Dynamics and Mechanisms

Data management plan for the grant, "Non-Genetic Inheritance of Hypoxia Tolerance in Fishes: Dynamics and Mechanisms." Research quantifying the inheritance of tolerance to low oxygen in a model fish and then determine the tolerance mechanisms, at organismal to molecular levels, that are passed on from parents to their offspring. The investigators will not only focus on conventional, well-studied genetic mechanisms for inheritance, but will explore so-called “epigenetic” forms of inheritance that may transfer parental characteristics for only a generation or two. Such “temporary inheritance” might actually require less energy and be more beneficial to a species than the more permanent form of genetic inheritance. This project will quantify non-genetic inheritance of hypoxia tolerance in zebrafish as a model organism and then identify underlying mechanisms, at organismal to molecular levels, in parents and in their progeny. Specifically, this project will quantify non-genetically inherited traits that allow hypoxia tolerance, determine “wash-in” and “wash-out” (i.e., the dynamics) of hypoxia-tolerant phenotypes across multiple generations, and establish epigenetic mechanism(s) of non-genetic inheritance in subsequent generations. The information provided by this project will allow biologists to better predict, and perhaps even mitigate, the negative consequences of future episodes of low oxygen in rivers and lakes.
Date: 2021-06-15/2025-05-31
Creator: Burggren, Warren W. & Padilla, Pamela A.
Object Type: Text
System: The UNT Digital Library
Computational Study of Methane C–H Activation by Main Group and Mixed Main Group–Transition Metal Complexes (open access)

Computational Study of Methane C–H Activation by Main Group and Mixed Main Group–Transition Metal Complexes

This article presents density functional theory (DFT) research where nine different molecules, each with different combinations of A (triel) and E (divalent metal) elements, were reacted to effect methane C–H activation.
Date: May 26, 2020
Creator: Carter, Carly C. & Cundari, Thomas R., 1964-
Object Type: Article
System: The UNT Digital Library
Badly approximable points on self-affine sponges and the lower Assouad dimension (open access)

Badly approximable points on self-affine sponges and the lower Assouad dimension

This article highlights a connection between Diophantine approximation and the lower Assouad dimension by using information about the latter to show that the Hausdorff dimension of the set of badly approximable points that lie in certain non-conformal fractals, known as self-affine sponges, is bounded below by the dynamical dimension of these fractals. The results, which are the first to advance beyond the conformal setting, encompass both the case of Sierpiński sponges/carpets (also known as Bedford–McMullen sponges/carpets) and the case of Barański carpets.
Date: June 20, 2017
Creator: Das, Tushar; Fishman, Lior; Simmons, David & Urbański, Mariusz
Object Type: Article
System: The UNT Digital Library
Gemini Near Infrared Spectrograph–Distant Quasar Survey: Prescriptions for Calibrating UV-based Estimates of Supermassive Black Hole Masses in High-redshift Quasars (open access)

Gemini Near Infrared Spectrograph–Distant Quasar Survey: Prescriptions for Calibrating UV-based Estimates of Supermassive Black Hole Masses in High-redshift Quasars

Article describes how the most reliable single-epoch supermassive black hole mass (MBH) estimates in quasars are obtained by using the velocity widths of low-ionization emission lines, typically the Hβλ4861 line. The authors find that utilizing both emission lines, where available, reduces the scatter of UV-based MBH estimates by ∼15% when compared to previous studies.
Date: June 13, 2023
Creator: Dix, Cooper; Matthews, Brandon; Shemmer, Ohad; Brotherton, Michael S.; Myers, Adam D.; Andruchow, I. et al.
Object Type: Article
System: The UNT Digital Library
The Long-Term Effects of Developmental Hypoxia on Cardiac Mitochondrial Function in Snapping Turtles (open access)

The Long-Term Effects of Developmental Hypoxia on Cardiac Mitochondrial Function in Snapping Turtles

This article investigates the long-term effects of developmental hypoxia on mitochondrial function in a species that regularly encounters hypoxia during development. Findings speculate that adjustments might improve mitochondrial hypoxia tolerance, which would be beneficial for turtles during breath-hold diving and overwintering in anoxic environments.
Date: June 28, 2021
Creator: Galli, Gina L. J.; Ruhr, Ilan M.; Crossley, Janna & Crossley, Dane A., II
Object Type: Article
System: The UNT Digital Library
Combining semi-synthesis with plant and microbial biocatalysis: new frontiers in producing a chemical arsenal against cancer (open access)

Combining semi-synthesis with plant and microbial biocatalysis: new frontiers in producing a chemical arsenal against cancer

This article demonstrates the methods of semi-synthesis and biocatalysis that can be used as modules in succession and in different combinations to produce 6,8-dibromogenkwanin, a derivative of the anticancer natural product apigenin.
Date: June 4, 2018
Creator: Gary, Samuel; Adegboye, Janet; Popp, Brian; Cocuron, Jean-Christophe; Woodrum, Brooklyn & Kovinich, Nik
Object Type: Article
System: The UNT Digital Library
First Principles Study of the Optical Emission of Cadmium Yellow: Role of Cadmium Vacancies (open access)

First Principles Study of the Optical Emission of Cadmium Yellow: Role of Cadmium Vacancies

This article studies the role of structural defects in the CdS-based cadmium yellow paint to explain the origin of its deep trap states optical emission.
Date: June 1, 2018
Creator: Giacopetti, Laura; Nevin, Austin; Comelli, Daniela; Valentini, Gianluca; Buongiorno Nardelli, Marco & Satta, Alessandra
Object Type: Article
System: The UNT Digital Library
Phosphorylation of Myosin Light Chain Kinase by p21-activated Kinase PAK2 (open access)

Phosphorylation of Myosin Light Chain Kinase by p21-activated Kinase PAK2

Article reporting that PAK2, a member of the Rho family of GTPase-dependent kinases, regulates isometric tension development and myosin II RLC phosphorylation in saponin permeabilized endothelial monolayers. The results demonstrate that PAK2 can directly phosphorylate MLCK, inhibiting its activity and limiting the development of isometric tension.
Date: June 16, 2000
Creator: Goeckeler, Zoe M.; Masaracchia, Ruthann A.; Zeng, Qi; Chew, Teng-Leong; Gallagher, Patricia & Wysolmerski, Robert B.
Object Type: Article
System: The UNT Digital Library
CancerNet: a unified deep learning network for pan‑cancer diagnostics (open access)

CancerNet: a unified deep learning network for pan‑cancer diagnostics

Article states that despite remarkable advances in cancer research, cancer remains one of the leading causes of death worldwide. The author's proposed framework for cancer diagnostics detects cancers and their tissues of origin using a unified model of cancers encompassing 33 cancers represented in The Cancer Genome Atlas. Their model exploits the learned features of different cancers reflected in the respective dysregulated epigenomes, holding a great promise in early cancer detection.
Date: June 13, 2022
Creator: Gore, Steven & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Systematic approaches to C-lignin engineering in Medicago truncatula (open access)

Systematic approaches to C-lignin engineering in Medicago truncatula

Article describes how C-lignin is a homopolymer of caffeyl alcohol present in the seed coats of a variety of plant species including vanilla orchid, various cacti, and the ornamental plant Cleome hassleriana. The authors used information from a transcriptomic analysis of developing C. hassleriana seed coats to suggest strategies for engineering C-lignin in a heterologous system, using hairy roots of the model legume Medicago truncatula.
Date: June 12, 2023
Creator: Ha, Chan Man; Escamilla-Treviño, Luis; Zhuo, Chunliu; Pu, Yunqiao; Bryant, Nathan; Ragauskas, Arthur J. (Arthur Jonas), 1957- et al.
Object Type: Article
System: The UNT Digital Library
Closed-form expressions for the magnetic fields of rectangular and circular finite-length solenoids and current loops (open access)

Closed-form expressions for the magnetic fields of rectangular and circular finite-length solenoids and current loops

This article discusses closed-form expressions for the magnetic fields produced by rectangular- and circular-shaped finite-length solenoids and current loops. The closed-form expression for the magnetic field of a rectangular-shaped finite-length solenoid is derived using the Biot–Savart law. Closed-form expressions for the magnetic fields of solenoids and current loops can be used to avoid approximations in analytical models and may reduce computation time in computer simulations.
Date: June 15, 2020
Creator: Hampton, S.; Lane, R. A.; Hedlof, R. M.; Phillips, R. E. & Ordonez, Carlos A.
Object Type: Article
System: The UNT Digital Library
Code Comparison in Galaxy-scale Simulations with Resolved Supernova Feedback: Lagrangian versus Eulerian Methods (open access)

Code Comparison in Galaxy-scale Simulations with Resolved Supernova Feedback: Lagrangian versus Eulerian Methods

Authors of the article present a suite of high-resolution simulations of an isolated dwarf galaxy using four different hydrodynamical codes: Gizmo, Arepo, Gadget, and Ramses. They find reasonable agreement on the time-averaged star formation rates as well as the joint density–temperature distributions between all codes.
Date: June 16, 2023
Creator: Hu, Chia-Yu; Smith, Matthew C.; Teyssier, Romain; Bryan, Greg L.; Verbeke, Robbert; Emerick, Andrew et al.
Object Type: Article
System: The UNT Digital Library
Genomic diversity of bacteriophages infecting Microbacterium spp (open access)

Genomic diversity of bacteriophages infecting Microbacterium spp

Article describing the isolation and genomic characterization of 116 phages that infect Microbacterium spp.
Date: June 18, 2020
Creator: Hughes, Lee E.; Jacobs-Sera, Deborah; Abad, Lawrence A.; Alvey, Richard M.; Anders, Kirk R.; Aull, Haley G. et al.
Object Type: Article
System: The UNT Digital Library
Holographic Fabrication of 3D Moiré Photonic Crystals Using Circularly Polarized Laser Beams and a Spatial Light Modulator (open access)

Holographic Fabrication of 3D Moiré Photonic Crystals Using Circularly Polarized Laser Beams and a Spatial Light Modulator

The authors of the article state that holographic fabrication of a 3D moiré photonic crystal is very difficult due to the coexistence of the bright and dark regions, where the exposure threshold is suitable for one region but not for the other. In this paper, the authors study the holographic fabrication of 3D moiré photonic crystals using an integrated system of a single reflective optical element (ROE) and a spatial light modulator (SLM) where nine beams (four inner beams + four outer beams + central beam) are overlapped.
Date: June 9, 2023
Creator: Hurley, Noah; Kamau, Steve; Cui, Jingbiao & Lin, Yuankun
Object Type: Article
System: The UNT Digital Library
Surface Activation and Pretreatments for Biocompatible Metals and Alloys Used in Biomedical Applications (open access)

Surface Activation and Pretreatments for Biocompatible Metals and Alloys Used in Biomedical Applications

Article describes the main surface activation and pretreatment techniques for substrates such as titanium and its alloys, stainless steel, magnesium alloys, and CoCrMo alloys.
Date: June 2, 2019
Creator: Huynh, Vivian; Ngo, Ngan K. & Golden, Teresa Diane, 1963-
Object Type: Article
System: The UNT Digital Library
Transcriptome of Endophyte-Positive and Endophyte-Free Tall Fescue Under Field Stresses (open access)

Transcriptome of Endophyte-Positive and Endophyte-Free Tall Fescue Under Field Stresses

This article is a study that represents the first transcriptome analysis of E+ and E− Texoma tall fescue under freezing and chilling temperatures in the natural field environment.
Date: June 14, 2022
Creator: Islam, Shofiqul; Krom, Nick; Kwon, Taegun; Li, Guifen & Saha, Malay
Object Type: Article
System: The UNT Digital Library
Thermal instability and multiphase gas in the simulated interstellar medium with conduction, viscosity, and magnetic fields (open access)

Thermal instability and multiphase gas in the simulated interstellar medium with conduction, viscosity, and magnetic fields

This article uses 2D simulations to investigate thermal instability under the influence of various initial conditions and physical processes.
Date: June 7, 2021
Creator: Jennings, R. Michael & Li, Yuan
Object Type: Article
System: The UNT Digital Library
First record of horned puffin in the North Atlantic and tufted puffin in High Arctic Greenland (open access)

First record of horned puffin in the North Atlantic and tufted puffin in High Arctic Greenland

Article reports observations of two Subarctic North Pacific puffin species in the North Atlantic near the coast of north-west Greenland.
Date: June 26, 2020
Creator: Johnson, Jeff A.; Burnham, Kurt K.; Burnham, Jennifer L.; Konkel, Bridger W.; Stephens, Jack & Badgett, Hannah
Object Type: Article
System: The UNT Digital Library