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IslandCafe: Compositional Anomaly and Feature Enrichment Assessment for Delineation of Genomic Islands
Article discusses IslandCafe, a proposed method for genomic island detection.
Date:
October 1, 2019
Creator:
Jani, Mehul & Azad, Rajeev K.
System:
The UNT Digital Library
Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light
Article reveal that the systemic transcriptomic response of plants to excess light stress is extensive in the context of systemic acquired acclimation and involves an early (2 min) and transient stage of transcript expression that includes thousands of genes.
Date:
December 6, 2018
Creator:
Zandalinas, Sara I.; Sengupta, Soham; Burks, David; Azad, Rajeev K. & Mittler, Ron
System:
The UNT Digital Library
Local and Systemic Metabolic Responses during Light-Induced Rapid Systemic Signaling
This article reports that local application of light stress to one rosette leaf of bolting Arabidopsis (Arabidopsis thaliana) plants resulted in a metabolic response that encompassed local, systemic and transport tissues, demonstrating a high degree of physical and metabolic continuity between different tissues throughout the plant.
Date:
December 2018
Creator:
Choudhury, Feroza K.; Devireddy, Amith R.; Azad, Rajeev K.; Shulaev, Vladimir & Mittler, Ron
System:
The UNT Digital Library
Phylogenetic analysis of the CDGSH iron-sulfur binding domain reveals its ancient origin
This article reports on the origin, evolution, and diversification of the iron-sulfur (2Fe-2S) binding motif CDGSH.
Date:
November 28, 2017
Creator:
Sengupta, Soham; Nechushtai, Rachel; Jennings, Patricia A.; Onuchic, José N.; Padilla, Pamela A.; Azad, Rajeev K. et al.
System:
The UNT Digital Library
Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes
This article explores the use of an information-entropy-based gene clustering method for genomic island detection in MRSA.
Date:
November 16, 2017
Creator:
Jani, Mehul; Sengupta, Soham; Hu, Kelsey & Azad, Rajeev K.
System:
The UNT Digital Library
Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains
This article predicts that marine-derived bacteria should inhibit Vibrio pathogens and may be a source of unique antibiotic compounds.
Date:
March 10, 2017
Creator:
Burks, David J.; Norris, Stephen; Kauffman, Kathryn M.; Joy, Abigail; Arevalo, Philip; Azad, Rajeev K. et al.
System:
The UNT Digital Library