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Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes
This article explores the use of an information-entropy-based gene clustering method for genomic island detection in MRSA.
Date:
November 16, 2017
Creator:
Jani, Mehul; Sengupta, Soham; Hu, Kelsey & Azad, Rajeev K.
System:
The UNT Digital Library
Computational design of environmental sensors for the potent opioid fentanyl
This article describes the computational design of proteins that bind the potent analgesic fentanyl.
Date:
September 19, 2017
Creator:
Bick, Matthew J.; Greisen, Per J.; Morey, Kevin J.; Antunes, Mauricio S.; La, David; Sankaran, Banumathi et al.
System:
The UNT Digital Library
Identification of bottlenecks in the accumulation of cyclic fatty acids in camelina seed oil
This article proposes a model for the accumulation of substantial levels of cyclopropane fatty acids (CPA) in camelina, and discusses the differences between CPA accumulation in camelina and Arabidopsis.
Date:
July 10, 2017
Creator:
Yu, Xiao-Hong; Cahoon, Rebecca E.; Horn, Patrick J.; Shi, Hai; Prakash, Richa R.; Cai, Yuanheng et al.
System:
The UNT Digital Library
Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains
This article predicts that marine-derived bacteria should inhibit Vibrio pathogens and may be a source of unique antibiotic compounds.
Date:
March 10, 2017
Creator:
Burks, David J.; Norris, Stephen; Kauffman, Kathryn M.; Joy, Abigail; Arevalo, Philip; Azad, Rajeev K. et al.
System:
The UNT Digital Library
Xenopus and the art of oxygen maintenance
This column article discusses the impact of Robert Boutillier and Graham Shelton's 1986 Journal of Experimental Biology paper "Gas exchange, storage and transport in voluntarily diving Xenopus laevis."
Date:
November 15, 2017
Creator:
Tattersall, Glenn & Burggren, Warren W.
System:
The UNT Digital Library
Concept Inventory Development Reveals Common Student Misconceptions about Microbiology
This article identifies misconceptions in microbiology held by undergraduate students upon entry into an introductory, general microbiology course.
Date:
October 30, 2017
Creator:
Briggs, Amy G.; Hughes, Lee E.; Brennan, R. E.; Buchner, John; Horak, Rachel E. A.; Katz-Amburn, D. Sue et al.
System:
The UNT Digital Library
Development, Validation, and Application of the Microbiology Concept Inventory
This article describes the creation and validation of a new microbiology concept inventory using the American Society for Microbiology Curriculum Guidelines.
Date:
October 5, 2017
Creator:
Paustian, Timothy D.; Briggs, Amy G.; Brennan, R. E.; Boury, Nancy; Buchner, John; Harris, Shannon et al.
System:
The UNT Digital Library
Extensive shared polymorphism at non-MHC immune genes in recently diverged North American prairie grouse
This article investigates the patterns of shared polymorphism and selection at non-MHC immune genes in five grouse species from Centrocercus and Tympanuchus genera.
Date:
August 2, 2017
Creator:
Minias, Piotr; Bateson, Zachary W.; Whittingham, Linda A.; Johnson, Jeff A.; Oyler-McCance, Sara & Dunn, Peter O.
System:
The UNT Digital Library
Critical Developmental Windows for Morphology and Hematology Revealed by Intermittent and Continuous Hypoxic Incubation in Embryos of Quail (Coturnix Coturnix)
This article describes the exposure of quail embryos in the intact egg to hypoxia during "early" or "late" incubation for their entire 16-18 day incubation to determine critical windows for viability and growth.
Date:
November 14, 2016
Creator:
Burggren, Warren W. & Elmonoufy, Nourhan
System:
The UNT Digital Library
Direct Pcr Amplification of Dna From Human Bloodstains, Saliva, and Touch Samples Collected With Microfloq® Swabs
This article investigates the efficacy of direct amplification of DNA from bloodstains, saliva stains, and touch samples using microFLOQ® Direct swabs and the GlobalFiler™ Express system (Thermo Fisher Scientific, Waltham, MA).
Date:
October 26, 2017
Creator:
Ambers, Angie D.; Wiley, Rachel; Novroski, Nicole & Budowle, Bruce
System:
The UNT Digital Library
Genome Sequences of Five Streptomyces Bacteriophages Forming Cluster BG
This article discusses the isolation of five novel phages, which were used to established the cluster BF, using Streptomyces griseus subsp. griseus strain ATcC 10137 as the host.
Date:
July 13, 2017
Creator:
Donegan-Quick, Richard; Gibbs, Zane A.; Amaku, Patricia O.; Bernal, Joshua T.; Boyd, Dana A. M.; Burr, Angela R. et al.
System:
The UNT Digital Library
Characterization of UGT716A1 as a Multi-substrate UDP:Flavonoid Glucosyltransferase Gene in Ginkgo biloba
This article discusses the generation of a transcriptomic dataset of G. biloba leaf tissue by high-throughput RNA sequencing to better understand flavonoid glucosylation in G. biloba.
Date:
December 7, 2017
Creator:
Su, Xiaojia; Shen, Guoan; Di, Shaokang; Dixon, R. A. & Pang, Yongzhen
System:
The UNT Digital Library
Brassinosteroid Mediated Cell Wall Remodeling in Grasses Under Abiotic Stress
This article focuses on recent advances in brassinosteroid-regulated cell wall biosynthesis and remodeling in response to stresses, comparing the authors' understanding of the mechanisms in grass species with those in the more studied dicots.
Date:
May 17, 2017
Creator:
Rao, Xiaolan & Dixon, R. A.
System:
The UNT Digital Library
Editorial: Advances in Plant-Hemipteran Interactions
This editorial discusses sixteen manuscripts which address the physiology and molecular biology of plant-hemipteran interactions at different levels.
Date:
September 21, 2017
Creator:
Shah, Jyoti & Walling, Linda
System:
The UNT Digital Library
Heart Performance Determination by Visualization in Larval Fishes: Influence of Alternative Models for Heart Shape and Volume
This article assesses the validity of three different heart models applied to digital images of complete cardiac cycles in larval mahi-mahi and red drum.
Date:
July 4, 2017
Creator:
Perrichon, Prescilla; Grosell, Martin & Burggren, Warren W.
System:
The UNT Digital Library
Association between CYP2D6 Genotypes and the Risk of Antidepressant Discontinuation, Dosage Modification and the Occurrence of Maternal Depression during Pregnancy
This article investigates the association between CYP2D6 genotype and the risk of antidepressant discontinuation, dosage modification, and the occurrence of maternal CYP2D6, Antidepressants, Depression during pregnancy.
Date:
July 17, 2017
Creator:
Bérard, Anick; Gaedigk, Andrea; Sheehy, Odile; Chambers, Christina; Roth, Mark; Bozzo, Pina et al.
System:
The UNT Digital Library
Cardiorespiratory physiological phenotypic plasticity in developing air-breathing anabantid fishes (Betta splendens and Trichopodus trichopterus)
This article discusses development plasticity of cardiorespiratory physiology in two air-breathing anabantid fishes.
Date:
June 16, 2017
Creator:
Mendez-Sanchez, Jose F. & Burggren, Warren W.
System:
The UNT Digital Library
Genetically engineered probiotic for the treatment of phenylketonuria (PKU); assessment of a novel treatment in vitro and in the PAHᵉⁿᵘ² mouse model of PKU
This article describes the testing of a phenylalanine lyase gene from Anabaena variabilis (AvPAL) codon-optimized and cloned into a shuttle vector for expression in Lactobacillus reuteri 100-23C (pHENOMMenal).
Date:
May 17, 2017
Creator:
Durrer, Katherine E.; Allen, Michael S. & Hunt von Herbing, Ione
System:
The UNT Digital Library
Epigenetic reprogramming converts human Wharton's jelly mesenchymal stem cells into functional cardiomyocytes by differential regulation of Wnt mediators
This article studies the differentiation of human Wharton's jelly mesenchymal stem cells into the cardiomyocyte lineage via epigenetic manipulations.
Date:
May 24, 2017
Creator:
Bhuvanalakshmi, G.; Arfuso, Frank; Kumar, Alan Prem; Dharmarajan, Arunasalam & Warrier, Sudha R.
System:
The UNT Digital Library
Altered embryonic development in northern bobwhite quail (Colinus virginianus) induced by pre-incubation oscillatory thermal stresses mimicking global warming predictions
This article describes the exposure of freshly laid bobwhite quail eggs to one of five thermal regimes during a 12 day pre-incubation period.
Date:
March 31, 2017
Creator:
Reyna, Kelly S. & Burggren, Warren W.
System:
The UNT Digital Library
Gold at what cost? Another megaproject threatens biodiversity in the Amazon
Article discusses concerns and controversy related to the gold mining ‘Volta Grande Project’ at the Xingu River in northern Brazil.
Date:
June 26, 2017
Creator:
Tófoli, Raffael M.; Dias, Rosa M.; Alves, Gustavo H. Zaia; Hoeinghaus, David J.; Gomes, Luiz C.; Baumgartner, Matheus T. et al.
System:
The UNT Digital Library
Molecular Dynamics Simulations of the [2Fe–2S] Cluster-Binding Domain of NEET Proteins Reveal Key Molecular Determinants That Induce Their Cluster Transfer/Release
Article examines NEET proteins and aberrant cluster release, which is implicated in a variety of human diseases, including cancer.
Date:
October 31, 2017
Creator:
Pesce, Luca; Calandrini, Vania; Marjault, Henri-Baptiste; Lipper, Colin H.; Rossetti, Gulia; Mittler, Ron et al.
System:
The UNT Digital Library
Developmental Transcriptomic Analyses for Mechanistic Insights Into Critical Pathways Involved in Embryogenesis of Pelagic Mahi-Mahi (Coryphaena Hippurus)
This article characterizes the developmental transcriptome of mahi-mahi by means of high throughput sequencing at three critical developmental stages.
Date:
July 10, 2017
Creator:
Xu, Elvis Genbo; Mager, Edward M.; Grosell, Martin; Stieglitz, John D.; Hazard, E. Starr; Hardiman, Gary et al.
System:
The UNT Digital Library
Gold at What Cost? Another Megaproject Threatens Biodiversity in the Amazon
This article summarizes three controversial aspects of the Volta Grande project.
Date:
March 24, 2017
Creator:
Tófoli, Raffael M.; Dias, Rosa M.; Alves, Gustavo H. Zaia; Hoeinghaus, David; Gomes, Luiz C.; Baumgartner, Matheus T. et al.
System:
The UNT Digital Library