FLP-mediated conditional loss of an essential gene to facilitate complementation assays (open access)

FLP-mediated conditional loss of an essential gene to facilitate complementation assays

Commonly, when it is desirable to replace an essential gene with an allelic series of mutated genes, or genes with altered expression patterns, the complementing constructs are introduced into heterozygous plants, followed by the selection of homozygous null segregants. To overcome this laborious and time-consuming step, the newly developed two-component system utilizes a site-specific recombinase to excise a wild-type copy of the gene of interest from transformed tissues. In the first component (the first vector), a wild-type version of the gene is placed between target sequences recognized by FLP recombinase from the yeast 2 μm plasmid. This construct is transformed into a plant heterozygous for a null mutation at the endogenous locus, and progeny plants carrying the excisable complementing gene and segregating homozygous knockout at the endogenous locus are selected. The second component (the second vector) carries the experimental gene along with the FLP gene. When this construct is introduced, FLP recombinase excises the complementing gene, leaving the experimental gene as the only functional copy. The FLP gene is driven by an egg apparatus specific enhancer (EASE) to ensure excision of the complementing cDNA in the egg cell and zygote following floral-dip transformation. The utility of this system is being …
Date: December 2007
Creator: Ganesan, Savita
System: The UNT Digital Library
The role of prostaglandins, nitric oxide and oxygen in the ductus arteriosi of the pre-term chicken embryo (Gallus domesticus). (open access)

The role of prostaglandins, nitric oxide and oxygen in the ductus arteriosi of the pre-term chicken embryo (Gallus domesticus).

The chicken ductus arteriosi (DA) are two embryonic blood vessels that shunt blood away from the non-ventilated lungs and towards the body and chorioallantoic membrane. I show that prostaglandins have a diminished role in maintaining chicken DA patency and nitric oxide inhibits oxygen induced contraction of the day 19 proximal DA in a time dependent manner. The pathways governing oxygen induced contraction in the chicken DA are similar to those found in mammals and include contributions from ROS, Kv channels, L-type Ca2+ channels, and the Rho kinase pathway. Longer exposure to high oxygen generates increased oxygen induced constriction of the day 19 DA that may be mediated through the Rho kinase pathway.
Date: December 2007
Creator: Greyner, Henry José
System: The UNT Digital Library
Home range analysis of rehabilitated and released great horned owls (Bubo virginianus) in Denton County, Texas, through radio telemetry. (open access)

Home range analysis of rehabilitated and released great horned owls (Bubo virginianus) in Denton County, Texas, through radio telemetry.

Raptor rehabilitation has become commonplace globally, yet studies on the survival and adaptation of great horned owls (Bubo virginianus) after release has been neglected to an appreciable extent. The primary objective of this study is to provide quantitative data on the success of rehabilitated and released great horned owls in the North Texas region. Owls (N=12) were rehabilitated and released onto the Ray Roberts Greenbelt Corridor in Denton County, Texas, and monitored using radio telemetry to evaluate home range (November 2002 - February 2005). With approximately 75% of the birds released for this study surviving until transmitter battery failure, it is believed that the rehabilitation process was successful for these birds.
Date: December 2007
Creator: Johnston, Jennifer Lynn
System: The UNT Digital Library
Physical Map between Marker 8O7 and 146O17 on the Medicago truncatula Linkage Group 1 that Contains the NIP Gene (open access)

Physical Map between Marker 8O7 and 146O17 on the Medicago truncatula Linkage Group 1 that Contains the NIP Gene

The Medicago truncatula NIP gene is located on M. truncatula Linkage Group 1. Informative recombinants showed crossovers that localize the NIP gene between markers 146O17 and 23C16D. Marker 164N9 co-segregates with the NIP gene, and the location of marker 164N9 is between markers 146O17 and 23C16D. Based upon data from the Medicago genome sequencing project, a subset of the model legume Medicago truncatula bacterial artificial chromosomes (BACs) were used to create a physical map on the DNA in this genetic internal. BACs near the potential NIP gene location near marker 164N9 were identified, and used in experiments to predict the physical map by a BAC-by-BAC strategy. Using marker 164N9 as a center point, and chromosome walking outward, the physical map toward markers 146O17 and 23C16D was built. The chromosome walk consisted of a virtual walk, made with existing sequence of BACs from the Medicago genome project, hybridizations to filters containing BAC DNA, and PCR reactions to confirm that predicted overlapping BACs contained DNA that yielded similar PCR products. In addition, the primers which are made for physical mapping via PCR could be good genetic markers helpful in discovering the location of the NIP gene. As a result of efforts repotted …
Date: December 2007
Creator: Lee, Yi-Ching
System: The UNT Digital Library
Optimization of Cell Culture Procedures for Growing Neural Networks on Microelectrode Arrays (open access)

Optimization of Cell Culture Procedures for Growing Neural Networks on Microelectrode Arrays

This thesis describes the development of an optimized method for culturing dissociated, monolayer neuronal networks from murine frontal cortex and midbrain. It is presented as a guidebook for use by cell culture specialists and laboratory personnel who require updated and complete procedures for use with microelectrode array (MEA) recording technology. Specific cell culture protocols, contamination prevention and control, as well common problems encountered within the cell culture facility, are discussed. This volume offers value and utility to the rapidly expanding fields of MEA recording and neuronal cell culture. Due to increasing interest in determining the mechanisms underlying Parkinson's disease, the newly developed procedures for mesencephalon isolation and culture on MEAs are an important research contribution.
Date: December 2007
Creator: Santa Maria, Cara L.
System: The UNT Digital Library
Organic carbon dynamics of the Neches River and its floodplain. (open access)

Organic carbon dynamics of the Neches River and its floodplain.

A large river system typically derives the majority of its biomass from production within the floodplain. The Neches River in the Big Thicket National Preserve is a large blackwater river that has an extensive forested floodplain. Organic carbon was analyzed within the floodplain waters and the river (upstream and downstream of the floodplain) to determine the amount of organic carbon from the floodplain that is contributing to the nutrient dynamics in the river. Dissolved organic carbon was significantly higher at downstream river locations during high discharge. Higher organic carbon levels in the floodplain contributed to increases in organic carbon within the Neches River downstream of the floodplain when Neches River discharges exceeded 10,000 cfs. Hurricane Rita passed through the Big Thicket National Preserve in September 2005. Dissolved organic carbon concentrations recorded after Hurricane Rita in the Neches River downstream of the floodplain were significantly higher than upstream of the floodplain. Dissolved organic carbon was twice as high after the hurricane than levels prior to the hurricane, with floodplain concentrations exceeding 50 ppm C. The increase in organic carbon was likely due to nutrients leached from leaves, which were swept from the floodplain trees prior to normal abscission in the fall. …
Date: December 2007
Creator: Stamatis, Allison Davis
System: The UNT Digital Library