I: Quantum information obeys laws that subtly extend those governing classical information, making possible novel effect such as cryptography and quantum computation. Quantum computations are extremely sensitive to disruption by interaction of the computer with its environment, but this problem can be overcome by recently developed quantum versions of classical error-correcting codes and fault-tolerant circuits. Based on these ideas, the purpose of this paper is to provide an approach to quantum information by analyzing and demonstrating Bell's inequality and by discussing the problems related to decoherence and error-correcting. II: The growing need for a better understanding of complex processes has stimulated the development of new and more advanced data analysis techniques. The purpose of this research was to investigate some of the already existing techniques (Hurst's rescaled range and relative dispersion analysis), to develop a software able to process time series with these techniques, and to get familiar with the theory of diffusion processes.

The finite element method (FEM) is reviewed and applied to the one-dimensional eigensystems of the isotropic harmonic oscillator, finite well, infinite well and radial hydrogen atom, and the two-dimensional eigensystems of the isotropic harmonic oscillator and the propagational modes of sound in a rectangular cavity. Computer codes that I developed were introduced and utilized to find accurate results for the FEM eigensolutions. One of the computer codes was modified and applied to the one-dimensional unbound quantum mechanical system of a square barrier potential and also provided accurate results.

The fractal operators discussed in this dissertation are introduced in the form originally proposed in an earlier book of the candidate, which proves to be very convenient for physicists, due to its heuristic and intuitive nature. This dissertation proves that these fractal operators are the most convenient tools to address a number of problems in condensed matter, in accordance with the point of view of many other authors, and with the earlier book of the candidate. The microscopic foundation of the fractal calculus on the basis of either classical or quantum mechanics is still unknown, and the second part of this dissertation aims at this important task. This dissertation proves that the adoption of a master equation approach, and so of probabilistic as well as dynamical argument yields a satisfactory solution of the problem, as shown in a work by the candidate already published. At the same time, this dissertation shows that the foundation of Levy statistics is compatible with ordinary statistical mechanics and thermodynamics. The problem of the connection with the Kolmogorov-Sinai entropy is a delicate problem that, however, can be successfully solved. The derivation from a microscopic Liouville-like approach based on densities, however, is shown to be impossible. …

This dissertation addresses the delicate problem of establishing the statistical mechanical foundation of complex processes. These processes are characterized by a delicate balance of randomness and order, and a correct paradigm for them seems to be the concept of sporadic randomness. First of all, we have studied if it is possible to establish a foundation of these processes on the basis of a generalized version of thermodynamics, of non-extensive nature. A detailed account of this attempt is reported in Ignaccolo and Grigolini (2001), which shows that this approach leads to inconsistencies. It is shown that there is no need to generalize the Kolmogorov-Sinai entropy by means of a non-extensive indicator, and that the anomaly of these processes does not rest on their non-extensive nature, but rather in the fact that the process of transition from dynamics to thermodynamics, this being still extensive, occurs in an exceptionally extended time scale. Even, when the invariant distribution exists, the time necessary to reach the thermodynamic scaling regime is infinite. In the case where no invariant distribution exists, the complex system lives forever in a condition intermediate between dynamics and thermodynamics. This discovery has made it possible to create a new method of analysis …

Collision strength, the measure of strength for a binary collision, hasn't been defined clearly. In practice, many physical arguments have been employed for the purpose and taken for granted. A scattering angle has been widely and intensively used as a measure of collision strength in plasma physics for years. The result of this is complication and unnecessary approximation in deriving some of the basic kinetic equations and in calculating some of the basic physical terms. The Boltzmann equation has a five-fold integral collision term that is complicated. Chandrasekhar and Spitzer's approaches to the linear Fokker-Planck coefficients have several approximations. An effective variable-change technique has been developed in this dissertation as an alternative to scattering angle as the measure of collision strength. By introducing the square of the reduced impulse or its equivalencies as a collision strength variable, many plasma calculations have been simplified. The five-fold linear Boltzmann collision integral and linearized Boltzmann collision integral are simplified to three-fold integrals. The arbitrary order linear Fokker-Planck coefficients are calculated and expressed in a uniform expression. The new theory provides a simple and exact method for describing the equilibrium plasma collision rate, and a precise calculation of the equilibrium relaxation time. It generalizes …

Maxwell's equations are obtained from Coulomb's Law using special relativity. For the derivation, tensor analysis is used, charge is assumed to be a conserved scalar, the Lorentz force is assumed to be a pure force, and the principle of superposition is assumed to hold. Einstein's gravitational field equation is obtained from Newton's universal law of gravitation. In order to proceed, the principle of least action for gravity is shown to be equivalent to the maximization of proper time along a geodesic. The conservation of energy and momentum is assumed, which, through the use of the Bianchi identity, results in Einstein's field equation.

Opto-electronic semiconductor technology continues to grow at an accelerated pace, as the industry seeks to perfect devices such as light emitting diodes for purposes of optical processing and communication. A strive for greater efficiency with shrinking device dimensions, continually pushes the technology from both a design and materials aspect. Nanosystems such a quantum dots, also face new material engineering challenges as they enter the realm of quantum mechanics, with each system and material having markedly different electronic properties. Traditionally, the semiconductor industry has focused on materials such Group II-VI and III-V compounds as the basis material for future opto-electronic needs. Unfortunately, these material systems can be expensive and have difficulties integrating into current Si-based technology. The industry is reluctant to leave silicon due in part to silicon's high quality oxide, and the enormous amount of research invested into silicon based circuit fabrication. Although recently materials such as GaN are starting to dominate the electro-optical industry since a Si-based substitute has not been found. The purpose of the dissertation was to examine several promising systems that could be easily integrated into current Si-based technology and also be produced using simple inexpensive fabrication techniques such ion implantation. The development of optically active …

This thesis addresses some theoretical issues generated by the results of recent analysis of EEG time series proving the brain dynamics are driven by abrupt changes making them depart from the ordinary Poisson condition. These changes are renewal, unpredictable and non-ergodic. We refer to them as crucial events. How is it possible that this form of randomness be compatible with the generation of waves, for instance alpha waves, whose observation seems to suggest the opposite view the brain is characterized by surprisingly extended coherence? To shed light into this apparently irretrievable contradiction we propose a model based on a generalized form of Langevin equation under the influence of a periodic stimulus. We assume that there exist two different forms of time, a subjective form compatible with Poisson statistical physical and an objective form that is accessible to experimental observation. The transition from the former to the latter form is determined by the brain dynamics interpreted as emerging from the cooperative interaction among many units that, in the absence of cooperation would generate Poisson fluctuations. We call natural time the brain internal time and we make the assumption that in the natural time representation the time evolution of the EEG variable …

An expression for the dielectric susceptibility tensor of a cubic ionic crystal has been derived using the classical Liouville operator. The effect of cubic anharmonic forces is included as a perturbation on the harmonic crystal solution, and a series expansion for the dielectric susceptibility is developed. The most important terms in the series are identified and summed, yielding an expression for the complex susceptibility with an anharmonic contribution which is linearly dependent on temperature. A numerical example shows that both the real and imaginary parts of the susceptibility are continuous, finite functions of frequency.

The Hartree-Fock-Bogoliubov theory of homogeneous boson systems at finite temperatures is rederived using, a free energy variational principle. It is shown that a t-matrix naturally emerges in the theory. Phenomenological modifications are made (1) to remove the energy gap at zero momentum, and (2) to eliminate the Hartree-Fock-like terms, which dress the kinetic energy of the particle. A numerical calculation of the energy spectrum is made over a temperature range of 0.00 to 3.14 K using the Morse dipole-dipole-2 potential and the Frost-Musulin potential. The energy spectrum of the elementary excitations is calculated self-consistently. It has a phonon behavior at low momentum and a roton behavior at higher momentum, so it is in qualitative agreement with the observed energy spectrum of liquid He II. However, the temperature dependence of the spectrum is incorrectly given. At the observed density of 0.0219 atoms A-3, the depletion of the zero-momentum state at zero temperature is 40.5% for the Morse dipole-dipole-2potential, and 43.2% for the Frost- Musulin potential. The depletion increases gradually until at 3.14 K the zero momentum density becomes zero discontinuously, which indicates a transition to the ideal Bose gas.

The frequency shifts and Q changes of a resonant microwave cavity were utilized as a basis for determining microwave properties of solids and liquids. The method employed consisted of varying the depth of penetration of a cylindrical sample of the material into a cavity operating in the TM0 1 0 Mode. The liquid samples were contained in a thin-walled quartz tube. The perturbation of the cavity was achieved by advancing the sample into the cavity along the symmetry axis by employing a micrometer drive appropriately calibrated for depth of penetration of the sample. A differentiation method was used to obtain the half-power points of the cavity resonance profile at each depth of penetration. The perturbation techniques for resonant cavities were used to reduce the experimental data obtained to physical parameters for the samples. The probing frequency employed was near 9 gHz.

Multilayer structures of AlxIn1-xAsySb1-y/GaSb (0.37 £ x £ 0.43, 0.50 £ y £ 0.52), grown by molecular beam epitaxy on GaSb (100) substrates were characterized using variable temperature Hall and Shubnikov-de Haas techniques. For nominally undoped structures both p and n-type conductivity was observed. The mobilities obtained were lower than those predicted by an interpolation method using the binary alloys; therefore, a detailed analysis of mobility versus temperature data was performed to extract the appropriate scattering mechanisms. For p-type samples, the dominant mechanism was ionized impurity scattering at low temperatures and polar optical phonon scattering at higher temperatures. For n-type samples, ionized impurity scattering was predominant at low temperatures, and electron-hole scattering dominated for both the intermediate and high temperature range. Analyses of the Shubnikov-de Haas data indicate the presence of 2-D carrier confinement consistent with energy subbands in GaAszSb1-z potential wells. Epilayers of GaAs1-xSbx (0.19<x<0.71), grown by MBE on semi-insulating GaAs with various substrate orientations, were studied by absorption measurements over the temperature range of 4-300 K. The various substrate orientations were chosen to induce different degrees of spontaneous atomic ordering. The temperature dependence of the energy gap (Eg) for each of these samples was modeled using three semi-empirical …

A new understanding of the damage formation mechanisms in Si is developed and investigated over an extended range of ion energy, dose, and irradiation temperature. A simple model for dealing with ion-induced damage is proposed, which is shown to be applicable over the range of implantation conditions. In particular the concept of defect "excesses" will be discussed. An excess exists in the lattice when there is a local surplus of one particular type of defect, such as an interstitial, over its complimentary defect (i.e., a vacancy). Mechanisms for producing such excesses by implantation will be discussed. The basis of this model specifies that accumulation of stable lattice damage during implantation depends upon the excess defects and not the total number of defects. The excess defect model is validated by fundamental damage studies involving ion implantation over a range of conditions. Confirmation of the model is provided by comparing damage profiles after implantation with computer simulation results. It will be shown that transport of ions in matter (TRIM) can be used effectively to model the ion-induced damage profile, i.e. excess defect distributions, by a simple subtraction process in which the spatially correlated defects are removed, thereby simulating recombination. Classic defect studies …

One of the leading problems that will be carried into the 21st century is that of alternative fuels to get our planet away from the consumption of fossil fuels. There has been a growing interest in the use of nanotechnology to somehow aid in this progression. There are several unanswered questions in how to do this. It is known that carbon nanotubes will store hydrogen but it is unclear how to increase that storage capacity and how to remove this hydrogen fuel once stored. This document offers some answers to these questions. It is possible to implant more hydrogen in a nanotube sample using a technique of ion implantation at energy levels ~50keV and below. This, accompanied with the rapid removal of that stored hydrogen through the application of a microwave field, proves to be one promising avenue to solve these two unanswered questions.

The dynamical origin of complexity is an object of intense debate and, up to moment of writing this manuscript, no unified approach exists as to how it should be properly addressed. This research work adopts the perspective of complexity as characterized by the emergence of non-Poisson renewal processes. In particular I introduce two new complex system models, namely the two-state stochastic clocks and the integrate-and-fire stochastic neurons, and investigate its coupled dynamics in different network topologies. Based on the foundations of renewal theory, I show how complexity, as manifested by the occurrence of non-exponential distribution of events, emerges from the interaction of the units of the system. Conclusion is made on the work's applicability to explaining the dynamics of blinking nanocrystals, neuron interaction in the human brain, and synchronization processes in complex networks.

The emergence of optical applications, such as lasers, fiber optics, and semiconductor based sources and detectors, has created a drive for smaller and more specialized devices. Nanophotonics is an emerging field of study that encompasses the disciplines of physics, engineering, chemistry, biology, applied sciences and biomedical technology. In particular, nanophotonics explores optical processes on a nanoscale. This dissertation presents nanophotonic applications that incorporate various forms of the organic polymer N-isopropylacrylamide (NIPA) with inorganic semiconductors. This includes the material characterization of NIPA, with such techniques as ellipsometry and dynamic light scattering. Two devices were constructed incorporating the NIPA hydrogel with semiconductors. The first device comprises a PNIPAM-CdTe hybrid material. The PNIPAM is a means for the control of distances between CdTe quantum dots encapsulated within the hydrogel. Controlling the distance between the quantum dots allows for the control of resonant energy transfer between neighboring quantum dots. Whereby, providing a means for controlling the temperature dependent red-shifts in photoluminescent peaks and FWHM. Further, enhancement of photoluminescent due to increased scattering in the medium is shown as a function of temperature. The second device incorporates NIPA into a 2D photonic crystal patterned on GaAs. The refractive index change of the NIPA hydrogel as …

This dissertation aims at addressing two important theoretical questions which are still debated in the statistical mechanical community. The first question has to do with the outstanding problem of how to reconcile time-reversal asymmetric macroscopic laws with the time-reversal symmetric laws of microscopic dynamics. This problem is addressed by developing a novel mechanical approach inspired by the work of Helmholtz on monocyclic systems and the Heat Theorem, i.e., the Helmholtz Theorem. By following a line of investigation initiated by Boltzmann, a Generalized Helmholtz Theorem is stated and proved. This theorem provides us with a good microscopic analogue of thermodynamic entropy. This is the volume entropy, namely the logarithm of the volume of phase space enclosed by the constant energy hyper-surface. By using quantum mechanics only, it is shown that such entropy can only increase. This can be seen as a novel rigorous proof of the Second Law of Thermodynamics that sheds new light onto the arrow of time problem. The volume entropy behaves in a thermodynamic-like way independent of the number of degrees of freedom of the system, indicating that a whole thermodynamic-like world exists at the microscopic level. It is also shown that breaking of ergodicity leads to microcanonical …

In recent years, continuum models of solvation have had exceptional success in materials simulations as well as condensed matter physics. They can easily capture the effects of disordered systems, such as neutral liquids or electrolytes solutions, on material interfaces without the need for expensive statistical sampling. The Environ library (www.quantum-environ.org) implements different continuum models and correction schemes, which is the focus of this presentation. Recently refactored into a stand-alone library, many changes have been introduced in Environ, making it more flexible and computationally efficient. Introduction of a double-cell formalism allows for faster ab initio DFT calculations while reparameterization of soft-sphere continuum model allows for smaller density cutoffs. Furthermore, Environ's periodic boundary conditions correction schemes have been expanded by including the AFC90 library, which allows for faster DFT calculations of partially periodic systems, such as slabs, wires, and isolated molecules. Finally, stand-alone Environ can now provide atomic and molecular descriptors, which can be used to characterize solvated interfaces, e.g. in machine learning applications. The specific details of the implementations are reviewed as well as their efficiency and some choice applications for different calculation setups and systems.

The Gemini Near Infrared Spectrograph - Distant Quasar Survey (GNIRS-DQS) is the largest uniform, homogeneous survey of its kind, covering 260 quasars at 1.5 ≤ z ≤ 3.5. This unique survey, coupled with data from the Sloan Digital Sky Survey (SDSS), enables new investigations into redshifts, supermassive black hole masses (MBH), and accretion rates at high redshift through spectroscopic coverage of important rest-frame UV-optical emission lines. The importance of this survey is highlighted in the fact that the optical emission lines provide more reliable measurements of these quasar parameters than their UV counterpart. With such a unique sample compiled here, I construct prescriptions to calibrate these quasar parameters derived from rest-frame UV emission lines to those derived from rest-frame optical emission lines. These prescriptions provide important insight into how these parameters depend on redshift and are potentially biased as we look out further into the universe. Additionally, all the work completed with this sample will help shape our understanding of how these quasars and their host galaxies co-evolve over cosmic time.

I present spectroscopic measurements for 260 sources from the Gemini Near Infrared Spectrograph–Distant Quasar Survey (GNIRS-DQS). Being the largest uniform, homogeneous survey of its kind, it represents a flux-limited sample of Sloan Digital Sky Survey (SDSS) quasars at 1.5 < z < 3.5. A combination of the GNIRS and SDSS spectra covers principal quasar diagnostic features, chiefly the C IV λ1549, Mg II λλ2798, 2803, Hβ λ4861, and [O III] λλ4959, 5007 emission lines, in each source. The spectral inventory is utilized primarily to develop prescriptions for obtaining more accurate and precise redshifts, black hole masses, and accretion rates for all quasars. Additionally, the measurements facilitate an understanding of the dependence of rest-frame ultraviolet–optical spectral properties of quasars on redshift, luminosity, and Eddington ratio, and test whether the physical properties of the quasar central engine evolve over cosmic time.

In this dissertation, I report the results of my research on twisted moiré photonic crystals which can be formed through multi-beam holographic interference without a physical rotation and later fabricated by electron-beam lithography. Their optical properties, such as photonic bandgaps, multiple resonance modes, and quality factor are presented. Randomized moire photonic crystals in lattice are also studied. The applications of moire photonic crystals in improving light extraction efficiency are simulated and verified in light emitting devices. Furthermore, I simulated the light extraction efficiency in OLED when the Al layer is patterned with a triangular GPSC, square moiré PhC with defects in the uniform area, and random locations of the photonic lattice, and obtain light extraction efficiency of 78.9%, 79.9%, 81.7%, respectively. Also, the ratios of photoluminescence intensity of LED integrated with twisted moiré PhCs and random moiré PhCs over that without moiré PhCs are measured to be (1.3-1.9) and 1.74, respectively, in a good agreement with simulated ratios of 1.69 and 1.8.

In nature we find many instances of complex behavior for example the dynamics of stock markets, power grids, internet networks, highway traffic, social networks, heartbeat dynamics, neural dynamics, dynamics of living organisms, etc. The study of these complex systems involves the use of tools of non-linear dynamics and non-equilibrium statistical physics. This dissertation is devoted to understanding two different sources of complex behavior – non-poissonian renewal events also called crucial events and infinite memory of fractional Brownian motion. They both generate 1/f noise frequency spectrum. Thus, we studied examples of both processes and also their joint action. We also tried to establish the role of crucial events in biological and physiological processes like biophoton emission during the germination of seeds, the dynamics of heartbeat and neural dynamics. Using a statistical method of analyzing the time series of bio signals we were able to quantify the complexity associated with the underlying dynamics of these processes. Finally, we adopted a model that unifies both crucial events and memory fluctuations to study the rhythmic behavior observed in heart rate variability of people during meditation. We were able to also quantify the level of stress reduction during meditation. The work presented in this dissertation …

Magnetic plasma expulsion uses a magnetic field distortion to redirect incident charged particles around a certain area for the purposes of shielding. Computational studies are carried out and for certain values of magnetic field, magnetic plasma expulsion is found to effectively shield a sizable area. There are however many plasma behaviors and interactions that must be considered. Applications to a new cryogenic antimatter trap design are discussed.

An artificially structured boundary (ASB) produces a short-range, static electromagnetic field that can reflect charged particles. In the work presented, an ASB is considered to consist of a spatially periodic arrangement of electrostatically plugged magnetic cusps. When used to create an enclosed volume, an ASB may confine a non-neutral plasma that is effectively free of applied electromagnetic fields, provided the spatial period of the ASB-applied field is much smaller than any one dimension of the confinement volume. As envisioned, a non-neutral positron plasma could be confined by an ASB along its edge, and the space-charge of the positron plasma would serve to confine an antiproton plasma. If the conditions of the two-species plasma are suitable, production of antihydrogen via three-body recombination for antimatter gravity studies may be possible. A classical trajectory Monte Carlo (CTMC) simulation suite has been developed in C++ to efficiently simulate charged particle interactions with user defined electromagnetic fields. The code has been used to explore several ASB configurations, and a concept for a cylindrically symmetric ASB trap that employs a picket-fence magnetic field has been developed. Particle-in-cell (PIC) modeling has been utilized to investigate the confinement of non-neutral and partially neutralized positron plasmas in the trap.