Visualization of Lipid Droplet Composition by Direct Organelle Mass Spectrometry (open access)

Visualization of Lipid Droplet Composition by Direct Organelle Mass Spectrometry

Article reporting an approach that combines the visualization of individual lipid droplets (LDs), microphase extraction of lipid components from droplets, and the direct identification of lipid composition by nanospray mass spectrometry, even to the level of a single LD. The triacylglycerol (TAG) composition of LDs from several plant sources (mature cotton (Gossypium hirsutum) embryos, roots of cotton seedlings, and Arabidopsis thaliana seeds and leaves) were examined by direct organelle mass spectrometry and revealed the heterogeneity of LDs derived from different plant tissue sources.
Date: February 4, 2011
Creator: Horn, Patrick J.; Ledbetter, Nicole R.; James, Christopher N.; Hoffman, William D.; Case, Charlene R.; Verbeck, Guido F. et al.
Object Type: Article
System: The UNT Digital Library
Cardiac and metabolic physiology of early larval zebrafish (Danio rerio) reflects parental swimming stamina (open access)

Cardiac and metabolic physiology of early larval zebrafish (Danio rerio) reflects parental swimming stamina

This article explores swimming stamina in fish. Mature adult zebrafish (Danio rerio) were subjected to a swimming performance test and then bred within performance groups to discover if enhanced swimming stamina in offspring appears only in juveniles/adults, or if these traits appear as early as larvae.
Date: February 24, 2012
Creator: Burggren, Warren W. & Gore, Matthew
Object Type: Article
System: The UNT Digital Library
Acid-base regulation in the air-breathing swamp eel (Monopterus albus) at different temperatures (open access)

Acid-base regulation in the air-breathing swamp eel (Monopterus albus) at different temperatures

Article describes study in which researchers characterized the influence of temperature on arterial acid–base balance and intracellular pH (pHi) in the bimodal-breathing swamp eel, Monopterus albus.
Date: February 27, 2018
Creator: Thinh, Phan Vinh; Phuong, Nguyen Thanh; Brauner, Colin J.; Huong, Do Thi Thanh; Wood, Andrew T.; Kwan, Garfield T. et al.
Object Type: Article
System: The UNT Digital Library
Evidence for the Involvement of Electrical, Calcium and ROS Signaling in the Systemic Regulation of Non-Photochemical Quenching and Photosynthesis (open access)

Evidence for the Involvement of Electrical, Calcium and ROS Signaling in the Systemic Regulation of Non-Photochemical Quenching and Photosynthesis

Article presents study in which pulse amplitude-modulated Chl fluorescence imaging and surface electrical potential measurements accompanied by pharmacological treatments were employed to study stimuli-induced electrical signals in leaves from a broad range of plant species and in Arabidopsis thaliana mutants.
Date: February 10, 2017
Creator: Białasek, Maciej; Górecka, Magdalena; Mittler, Ron & Karpiński, Stanisław
Object Type: Article
System: The UNT Digital Library
Overexpression of fatty acid amide hydrolase induces early flowering in Arabidopsis thaliana (open access)

Overexpression of fatty acid amide hydrolase induces early flowering in Arabidopsis thaliana

Article investigates the nature of the early flowering phenotype of AtFAAH overexpression.
Date: February 20, 2012
Creator: Teaster, Neal D.; Keereetaweep, Jantana; Kilaru, Aruna; Wang, Yuh-Shuh; Tang, Yuhong; Tran, Christopher N.-Q. et al.
Object Type: Article
System: The UNT Digital Library
Metabolomics as a hypothesis-generating functional genomics tool for the annotation of Arabidopsis thaliana genes of “unknown function” (open access)

Metabolomics as a hypothesis-generating functional genomics tool for the annotation of Arabidopsis thaliana genes of “unknown function”

Article describes the analysis of Arabidopsis metabolomics data sets acquired by a consortium that includes five analytical laboratories, bioinformaticists, and biostatisticians, which aims to develop and validate metabolomics as a hypothesis-generating functional genomics tool.
Date: February 10, 2012
Creator: Quanbeck, Stephanie M.; Brachova, Libuse; Campbell, Alexis A.; Guan, Xin; Perera, Ann; He, Kun et al.
Object Type: Article
System: The UNT Digital Library
Biochemical and molecular-genetic characterization of SFD1’s involvement in lipid metabolism and defense signaling (open access)

Biochemical and molecular-genetic characterization of SFD1’s involvement in lipid metabolism and defense signaling

Article describes study which sought to to determine if the dihydroxyacetone phosphate (DHAP) reductase activity and chloroplast localization are required for the Arabidopsis thaliana SFD1 (suppressor of fatty acid desaturase deficiency1) gene’s involvement in galactolipid metabolism and systemic acquired resistance (SAR) signaling.
Date: February 7, 2012
Creator: Lorenc-Kukula, Katarzyna; Chaturvedi, Ratnesh; Roth, Mary; Welti, Ruth & Shah, Jyoti
Object Type: Article
System: The UNT Digital Library
Cardiac and metabolic physiology of early larval zebrafish (Danio rerio) reflects parental swimming stamina (open access)

Cardiac and metabolic physiology of early larval zebrafish (Danio rerio) reflects parental swimming stamina

Article describes experiment in which mature adult zebrafish (Danio rerio) were subjected to a swimming performance test that allowed separation into low swimming stamina or high swimming stamina groups in order to determine if inherited traits that support enhanced swimming stamina in offspring appear only in juveniles and/or adults, or if these traits actually appear earlier in the morphologically quite different larvae.
Date: February 24, 2012
Creator: Gore, Matthew & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Mathematical models of lignin biosynthesis (open access)

Mathematical models of lignin biosynthesis

Article presents several computational models than can aid in the analysis of data characterizing lignin biosynthesis.
Date: February 9, 2018
Creator: Faraji, Mojdeh; Fonseca, Luis L.; Escamilla-Treviño, Luis; Barros-Rios, Jaime; Engle, Nancy L.; Yang, Zamin K. et al.
Object Type: Article
System: The UNT Digital Library
Targeting the pattern-triggered immunity pathway to enhance resistance to Fusarium graminearum (open access)

Targeting the pattern-triggered immunity pathway to enhance resistance to Fusarium graminearum

Article describes study which shows that resistance against fusarium graminearum, the primary casual agent of fusarium head blight (FHB), can be enhanced by flg22, a bacterial microbe-associated molecular pattern (MAMP).
Date: February 6, 2019
Creator: Sarowar, Sujon; Alam, Syeda T.; Makandar, Ragiba; Lee, Hyeonju; Trick, Harold N.; Dong, Yanhong et al.
Object Type: Article
System: The UNT Digital Library
Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass (open access)

Correction to: Multiple levers for overcoming the recalcitrance of lignocellulosic biomass

Correction to the previously published article "Multiple levers for overcoming the recalcitrance of lignocellulosic biomass".
Date: February 9, 2019
Creator: Holwerda, Evert; Worthen, Robert; Kothari, Ninad; Lasky, Ronald; Davison, Brian H. (Brian Henry), 1957-; Fu, Chunxiang et al.
Object Type: Article
System: The UNT Digital Library
The Unique Fold and Lability of the [2fe‑2s] Clusters of Neet Proteins Mediate Their Key Functions in Health and Disease (open access)

The Unique Fold and Lability of the [2fe‑2s] Clusters of Neet Proteins Mediate Their Key Functions in Health and Disease

This article discusses the NEET fold and its structural elements.
Date: February 12, 2018
Creator: Karmi, Ola; Marjault, Henri-Baptiste; Pesce, Luca; Carloni, Paolo; Onuchic, José N.; Jennings, Patricia A. et al.
Object Type: Article
System: The UNT Digital Library
Epigenetic modulation of inflammation and synaptic plasticity promotes resilience against stress in mice (open access)

Epigenetic modulation of inflammation and synaptic plasticity promotes resilience against stress in mice

This article uses high-throughput screening to identify two phytochemicals that are effective in promoting resilience against stress by moduling brain synaptic plasticity and peripheral inflammation.
Date: September 7, 2016
Creator: Wang, Jun; Hodes, Georgia E.; Zhang, Hongxing; Zhang, Song; Zhao, Wei; Golden, Sam A. et al.
Object Type: Article
System: The UNT Digital Library
Gold Nanoparticles-enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa Cells (open access)

Gold Nanoparticles-enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa Cells

This article describes a facile one-step method to synthesize stable collodial gold nanoparticles (AuNPs) loaded with a combination of two anticancer therapeutics, -bleomycin and doxorubicin
Date: September 20, 2017
Creator: Farooq, Muhammad U.; Novosad, Valentyn; Rozhkova, Elena A.; Wali, Hussain; Ali, Asghar; Fateh, Ahmed A. et al.
Object Type: Article
System: The UNT Digital Library
Complete Genome Sequences of 44 Arthrobacter Phages (open access)

Complete Genome Sequences of 44 Arthrobacter Phages

This article reports the complete genome sequences of 44 phages infecting Arthrobacter sp. strain ATCC 21022.
Date: February 1, 2018
Creator: Klyczek, Karen; Jacobs-Sera, Deborah; Adair, Tamarah; Adams, Sandra D.; Ball, Sarah; Benjamin, Robert C. et al.
Object Type: Article
System: The UNT Digital Library
Mathematical Models of Lignin Biosynthesis (open access)

Mathematical Models of Lignin Biosynthesis

This article presents several computational models that can aid in the analysis of data characterizing lignin biosynthesis.
Date: February 9, 2018
Creator: Faraji, Mojdeh; Fonseca, Luis L.; Escamilla-Treviño, Luis; Barros, Jaime; Engle, Nancy L.; Yang, Zamin K. et al.
Object Type: Article
System: The UNT Digital Library
Transgenic Switchgrass (Panicum Virgatum L.) Targeted for Reduced Recalcitrance to Bioconversion: A 2-Year Comparative Analysis of Field-Grown Lines Modified for Target Gene or Genetic Element Expression (open access)

Transgenic Switchgrass (Panicum Virgatum L.) Targeted for Reduced Recalcitrance to Bioconversion: A 2-Year Comparative Analysis of Field-Grown Lines Modified for Target Gene or Genetic Element Expression

This article discusses the investigation of clones of plants representing independent transgenic events and their respective nontransgenic control lines for biomass yield, carbohydrate composition and recalcitrance to bioconversion via separate hydrolysis and fermentation to yield ethanol.
Date: August 18, 2016
Creator: Dumitrache, Alexandru; Natzke, Jace; Rodriguez, Miguel, Jr.; Yee, Kelsey L.; Thompson, Olivia A.; Poovaiah, Charleson R. et al.
Object Type: Article
System: The UNT Digital Library
Metabolic rate and hypoxia tolerance are affected by group interactions and sex in the fruit fly (Drosophila melanogaster): new data and a literature survey (open access)

Metabolic rate and hypoxia tolerance are affected by group interactions and sex in the fruit fly (Drosophila melanogaster): new data and a literature survey

This article characterizes the effects of fly density and sex on both mass-specific routine oxygen consumption and hypoxia tolerance.
Date: February 14, 2017
Creator: Burggren, Warren W.; Souder, BriAnna M. & Ho, Dao H.
Object Type: Article
System: The UNT Digital Library
Spatial and Temporal Mapping of Key Lipid Species in Brassica napus Seeds (open access)

Spatial and Temporal Mapping of Key Lipid Species in Brassica napus Seeds

This article describes the use of matrix-assisted laser/desorption ionization-mass spectrometry imaging (MALDI-MSI) to study the spatial distribution of two major lipid species, triacylglycerols and phosphatidylcholines.
Date: February 10, 2017
Creator: Woodfield, Helen K.; Sturtevant, Drew; Borisjuk, Ljudmilla; Munz, Eberhard; Guschina, Irina A.; Chapman, Kent D. et al.
Object Type: Article
System: The UNT Digital Library
Long-distance communication and signal amplication in systemic acquired resistance (open access)

Long-distance communication and signal amplication in systemic acquired resistance

This review article summarizes the involvement and interaction between long-distance systemic acquired resistance (SAR) signals and details the recently discovered role of lysine catabolite pipecolic acid (Pip) in defense amplification and priming that allows plants to acquire immunity at the systemic level.
Date: February 22, 2013
Creator: Shah, Jyoti & Zeier, Jürgen
Object Type: Article
System: The UNT Digital Library
Synthesis of Phenoxyacyl-Ethanolamides and Their Effects on Fatty Acid Amide Hydrolase Activity (open access)

Synthesis of Phenoxyacyl-Ethanolamides and Their Effects on Fatty Acid Amide Hydrolase Activity

This article discusses the synthesis of two sets of phenoxyacyl-ethanolamides from natural products, 3-n-pentadecylphenolethanolamide and cardanolethanolamide, with structural similarity to N-Acylethanolamines and characterizes their effects on the hydroltic activity of fatty acid amide hydrolase.
Date: February 20, 2014
Creator: Faure, Lionel; Nagarajan, Subbiah; Hwang, Hyeondo; Montgomery, Christa L.; Khan, Bibi Rafeiza; John, George et al.
Object Type: Article
System: The UNT Digital Library
Lophozonia tree cavities used for nesting by Slender-billed Parakeets (Enicognathus leptorhynchus) in the central valley of southern Chile: a potentially vanishing keystone resource (open access)

Lophozonia tree cavities used for nesting by Slender-billed Parakeets (Enicognathus leptorhynchus) in the central valley of southern Chile: a potentially vanishing keystone resource

This article describes and quantifies characteristics of southern beech (Lophoonia obliqua) trees and their associated cavities used for nesting by Slender-billed Parakeets in the central valley of southern Chile.
Date: February 6, 2017
Creator: White, Thomas H., Jr. & Jiménez, Jaime E.
Object Type: Article
System: The UNT Digital Library
Computational Identification of Amino-Acid Mutations That Further Improve the Activity of a Chalcone-Flavonone Isomerase From Glycine Max (open access)

Computational Identification of Amino-Acid Mutations That Further Improve the Activity of a Chalcone-Flavonone Isomerase From Glycine Max

This article discusses a computational approach that combines multiple sequence alignment, positive selection detection, and molecular docking to identify and design beneficial amino-acid mutations that further improve the intramolecular-cyclization activity of a chalcone-flavonone isomerase from Glycine max (GmCHI).
Date: February 24, 2017
Creator: Yuan, Hui; Wu, Jiaqi; Wang, Xiaoqiang; Chen, Jiakuan; Zhong, Yang; Huang, Qiang et al.
Object Type: Article
System: The UNT Digital Library
Archaeological Protein Residues: New Data for Conservation Science (open access)

Archaeological Protein Residues: New Data for Conservation Science

This article identifies several cases where archaeological protein residues may be of benefit, justifies the use of protein residues in particular, and discusses areas for improvement.
Date: February 17, 2011
Creator: Barker, Andrew
Object Type: Article
System: The UNT Digital Library