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3,5-Bis(4-chlorobenzylidene)-1-methyl-piperidin-4-one (open access)

3,5-Bis(4-chlorobenzylidene)-1-methyl-piperidin-4-one

In the title molecule, C₂₀H₁₇Cl₂NO, the central heterocyclic ring adopts a flattened boat conformation.
Date: February 23, 2011
Creator: Nesterov, Volodymyr V.; Sarkisov, Sergey S.; Shulaev, Vladimir & Nesterov, Vladimir N.
System: The UNT Digital Library
A 3-dimensional theory of free electron lasers (open access)

A 3-dimensional theory of free electron lasers

In this paper, we present an analytical three-dimensional theory of free electron lasers. Under several assumptions, we arrive at an integral equation similar to earlier work carried out by Ching, Kim and Xie, but using a formulation better suited for the initial value problem of Coherent Electron Cooling. We use this model in later papers to obtain analytical results for gain guiding, as well as to develop a complete model of Coherent Electron Cooling.
Date: August 23, 2010
Creator: Webb, S. D.; Wang, G. & Litvinenko, V. N.
System: The UNT Digital Library
2010 Atomic & Molecular Interactions Gordon Research Conference (open access)

2010 Atomic & Molecular Interactions Gordon Research Conference

The Atomic and Molecular Interactions Gordon Conferences is justifiably recognized for its broad scope, touching on areas ranging from fundamental gas phase and gas-condensed matter collision dynamics, to laser-molecule interactions, photophysics, and unimolecular decay processes. The meeting has traditionally involved scientists engaged in fundamental research in gas and condensed phases and those who apply these concepts to systems of practical chemical and physical interest. A key tradition in this meeting is the strong mixing of theory and experiment throughout. The program for 2010 conference continues these traditions. At the 2010 AMI GRC, there will be talks in 5 broadly defined and partially overlapping areas of intermolecular interactions and chemical dynamics: (1) Photoionization and Photoelectron Dynamics; (2) Quantum Control and Molecules in Strong Fields; (3) Photochemical Dynamics; (4) Complex Molecules and Condensed Phases; and (5) Clusters and Reaction Dynamics. These areas encompass many of the most productive and exciting areas of chemical physics, including both reactive and nonreactive processes, intermolecular and intramolecular energy transfer, and photodissociation and unimolecular processes. Gas phase dynamics, van der Waals and cluster studies, laser-matter interactions and multiple potential energy surface phenomena will all be discussed.
Date: July 23, 2010
Creator: Martinez, Todd
System: The UNT Digital Library
2010 MICROBIAL STRESS RESPONSE GORDON RESEARCH CONFERENCE, JULY 18-23, 2010 (open access)

2010 MICROBIAL STRESS RESPONSE GORDON RESEARCH CONFERENCE, JULY 18-23, 2010

The 2010 Gordon Research Conference on Microbial Stress Responses provides an open and exciting forum for the exchange of scientific discoveries on the remarkable mechanisms used by microbes to survive in nearly every niche on the planet. Understanding these stress responses is critical for our ability to control microbial survival, whether in the context of biotechnology, ecology, or pathogenesis. From its inception in 1994, this conference has traditionally employed a very broad definition of stress in microbial systems. Sessions will cover the major steps of stress responses from signal sensing to transcriptional regulation to the effectors that mediate responses. A wide range of stresses will be represented. Some examples include (but are not limited to) oxidative stress, protein quality control, antibiotic-induced stress and survival, envelope stress, DNA damage, and nutritional stress. The 2010 meeting will also focus on the role of stress responses in microbial communities, applied and environmental microbiology, and microbial development. This conference brings together researchers from both the biological and physical sciences investigating stress responses in medically- and environmentally relevant microbes, as well as model organisms, using cutting-edge techniques. Computational, systems-level, and biophysical approaches to exploring stress responsive circuits will be integrated throughout the sessions alongside the …
Date: July 23, 2011
Creator: Ades, Sarah
System: The UNT Digital Library
2010 Plant Molecular Biology Gordon Research Conference (open access)

2010 Plant Molecular Biology Gordon Research Conference

The Plant Molecular Biology Conference has traditionally covered a breadth of exciting topics and the 2010 conference will continue in that tradition. Emerging concerns about food security have inspired a program with three main themes: (1) genomics, natural variation and breeding to understand adaptation and crop improvement, (2) hormonal cross talk, and (3) plant/microbe interactions. There are also sessions on epigenetics and proteomics/metabolomics. Thus this conference will bring together a range of disciplines, will foster the exchange of ideas and enable participants to learn of the latest developments and ideas in diverse areas of plant biology. The conference provides an excellent opportunity for individuals to discuss their research because additional speakers in each session will be selected from submitted abstracts. There will also be a poster session each day for a two-hour period prior to dinner. In particular, this conference plays a key role in enabling students and postdocs (the next generation of research leaders) to mingle with pioneers in multiple areas of plant science.
Date: July 23, 2010
Creator: Sussman, Michael
System: The UNT Digital Library
2012 MUTAGENESIS GORDON RESEARCH CONFERENCE, AUGUST 19-23, 2012 (open access)

2012 MUTAGENESIS GORDON RESEARCH CONFERENCE, AUGUST 19-23, 2012

The delicate balance among cellular pathways that control mutagenic changes in DNA will be the focus of the 2012 Mutagenesis Gordon Research Conference. Mutagenesis is essential for evolution, while genetic stability maintains cellular functions in all organisms from microbes to metazoans. Different systems handle DNA lesions at various times of the cell cycle and in different places within the nucleus, and inappropriate actions can lead to mutations. While mutation in humans is closely linked to disease, notably cancers, mutational systems can also be beneficial. The conference will highlight topics of beneficial mutagenesis, including full establishment of the immune system, cell survival mechanisms, and evolution and adaptation in microbial systems. Equal prominence will be given to detrimental mutation processes, especially those involved in driving cancer, neurological diseases, premature aging, and other threats to human health. Provisional session titles include Branching Pathways in Mutagenesis; Oxidative Stress and Endogenous DNA Damage; DNA Maintenance Pathways; Recombination, Good and Bad; Problematic DNA Structures; Localized Mutagenesis; Hypermutation in the Microbial World; and Mutation and Disease.
Date: August 23, 2012
Creator: Demple, Bruce
System: The UNT Digital Library
Ab Initio Many-Body Calculation of the 7Be(p,g)8B Radiative Capture (open access)

Ab Initio Many-Body Calculation of the 7Be(p,g)8B Radiative Capture

None
Date: May 23, 2011
Creator: Navratil, P; Roth, R & Quaglioni, S
System: The UNT Digital Library
AB INITIO STUDY OF ADVANCED METALLIC NUCLEAR FUELS FOR FAST BREEDER REACTORS (open access)

AB INITIO STUDY OF ADVANCED METALLIC NUCLEAR FUELS FOR FAST BREEDER REACTORS

Density-functional formalism is applied to study the ground state properties of {gamma}-U-Zr and {gamma}-U-Mo solid solutions. Calculated heats of formation are compared with CALPHAD assessments. We discuss how the heat of formation in both alloys correlates with the charge transfer between the alloy components. The decomposition curves for {gamma}-based U-Zr and U-Mo solid solutions are derived from Ising-type Monte Carlo simulations. We explore the idea of stabilization of the {delta}-UZr{sub 2} compound against the {alpha}-Zr (hcp) structure due to increase of Zr d-band occupancy by the addition of U to Zr. We discuss how the specific behavior of the electronic density of states in the vicinity of the Fermi level promotes the stabilization of the U{sub 2}Mo compound. The mechanism of possible Am redistribution in the U-Zr and U-Mo fuels is also discussed.
Date: April 23, 2012
Creator: Landa, A; Soderlind, P; Grabowski, B; Turchi, P A; Ruban, A V & Vitos, L
System: The UNT Digital Library
Accurate Alignment of Plasma Channels Based on Laser Centroid Oscillations (open access)

Accurate Alignment of Plasma Channels Based on Laser Centroid Oscillations

A technique has been developed to accurately align a laser beam through a plasma channel by minimizing the shift in laser centroid and angle at the channel outptut. If only the shift in centroid or angle is measured, then accurate alignment is provided by minimizing laser centroid motion at the channel exit as the channel properties are scanned. The improvement in alignment accuracy provided by this technique is important for minimizing electron beam pointing errors in laser plasma accelerators.
Date: March 23, 2011
Creator: Gonsalves, Anthony; Nakamura, Kei; Lin, Chen; Osterhoff, Jens; Shiraishi, Satomi; Schroeder, Carl et al.
System: The UNT Digital Library
Activation Volume and Energy for Dislocation Nucleation in Multi-Principal Element Alloys (open access)

Activation Volume and Energy for Dislocation Nucleation in Multi-Principal Element Alloys

Paper describes study evaluating incipient plasticity in multi-principal element alloys, CoCrNi, CoCrFeMnNi, and Al0.1CoCrFeNi by nano-indentation and compared with pure Ni.
Date: February 23, 2019
Creator: Mridha, Sanghita; Sadeghilaridjani, Maryam & Mukherjee, Sundeep
System: The UNT Digital Library
ALKBH7 Variant Related to Prostate Cancer Exhibits Altered Substrate Binding (open access)

ALKBH7 Variant Related to Prostate Cancer Exhibits Altered Substrate Binding

This article reports a targeted search for single nucleotide polymorphisms (SNPs) and functional impact characterization of human ALKBH family dioxygenases related to prostate cancer.
Date: September 23, 2016
Creator: Walker, Alice R.; Silvestrov, Pavel; Müller, Tina A.; Podolsky, Robert H.; Dyson, Gregory; Hausinger, Robert P. et al.
System: The UNT Digital Library
Altered expression of ionotropic L-Glutamate receptors in aged sensory neurons of Aplysia californica (open access)

Altered expression of ionotropic L-Glutamate receptors in aged sensory neurons of Aplysia californica

Article describes study in which mRNA expression of iGluR was quantified in two sensory neuron clusters of two cohorts of Aplysia californica (Aplysia) at both sexual maturity (~8 months) and advanced age (~12 months) in order to examine if changes in ionotropic L-Glu receptor (iGluR) transcription underlie reduced physiology8
Date: May 23, 2019
Creator: Greer, Justin B.; Mager, Edward M. & Fieber, Lynne A.
System: The UNT Digital Library
Amplification of photoacoustic effect in bimodal polymer particles by self-quenching of indocyanine green (open access)

Amplification of photoacoustic effect in bimodal polymer particles by self-quenching of indocyanine green

This article presents a new type of bimodal contrast agent that is based on the self-quenching of indocyanine green (ICG) encapsulated in a biocompatible and biodegradable polymer shell.
Date: August 23, 2019
Creator: Mokrousov, Maksim D.; Novoselova, Marina V.; Nolan, Jackie; Harrington, Walter; Rudakovskaya, Polina; Bratashov, Daniil N. et al.
System: The UNT Digital Library
Angular distribution of laser ablation plasma (open access)

Angular distribution of laser ablation plasma

An expansion of a laser induced plasma is fundamental and important phenomena in a laser ion source. To understand the expanding direction, an array of Langmuir probes were employed. The chosen ion for the experiment was Ag{sup 1+} which was created by a second harmonics of a Nd-YAG laser. The obtained angular distribution was about {+-}10 degree. This result also indicates a proper positioning of a solenoid magnet which enhances ion beam current.
Date: May 23, 2010
Creator: Kondo, K.; Kanesue, T.; Dabrowski, R. & Okamura, M.
System: The UNT Digital Library
An anthraquinone derivative, emodin sensitizes hepatocellular carcinoma cells to TRAIL indced apoptosis through the induction of death receptors and downregulation of cell survival proteins (open access)

An anthraquinone derivative, emodin sensitizes hepatocellular carcinoma cells to TRAIL indced apoptosis through the induction of death receptors and downregulation of cell survival proteins

Article on an anthraquinone derivative, emodin sensitizes hepatocellular carcinoma cells to TRAIL induced apoptosis through the induction of death receptors and downregulation of cell survival proteins.
Date: May 23, 2013
Creator: Subramaniam, Aruljothi; Loo, Ser Yue; Rajendran, Peramaiyan; Manu, Kanjoormana Aryan; Perumal, Ekambaram; Li, Feng et al.
System: The UNT Digital Library
ARPES Studies of Cuprate Fermiology: Superconductivity, Pseudogap and Quasiparticle Dynamics (open access)

ARPES Studies of Cuprate Fermiology: Superconductivity, Pseudogap and Quasiparticle Dynamics

We present angle-resolved photoemission spectroscopy (ARPES) studies of the cuprate high-temperature superconductors which elucidate the relation between superconductivity and the pseudogap and highlight low-energy quasiparticle dynamics in the superconducting state. Our experiments suggest that the pseudogap and superconducting gap represent distinct states, which coexist below T{sub c}. Studies on Bi-2212 demonstrate that the near-nodal and near-antinodal regions behave differently as a function of temperature and doping, implying that different orders dominate in different momentum-space regions. However, the ubiquity of sharp quasiparticles all around the Fermi surface in Bi-2212 indicates that superconductivity extends into the momentum-space region dominated by the pseudogap, revealing subtlety in this dichotomy. In Bi-2201, the temperature dependence of antinodal spectra reveals particle-hole asymmetry and anomalous spectral broadening, which may constrain the explanation for the pseudogap. Recognizing that electron-boson coupling is an important aspect of cuprate physics, we close with a discussion of the multiple 'kinks' in the nodal dispersion. Understanding these may be important to establishing which excitations are important to superconductivity.
Date: June 23, 2011
Creator: Vishik, Inna
System: The UNT Digital Library
Artificially structured boundary for confinement of effectively unmagnetized cryogenic antimatter plasmas (open access)

Artificially structured boundary for confinement of effectively unmagnetized cryogenic antimatter plasmas

The article is from conference proceedings that discuss an artificially structured boundary (ABS) considered to consist of a spatially periodic arrangement of electrostatically plugged magnetic cusps. As envisioned, a non-neutral positron plasma could be confined by an ASB along its edge, and the space charge of the positron plasma would serve to confine an antiproton plasma. If the conditions of the two-species plasma are suitable, production of antihydrogen via three-body recombination for antimatter gravity studies may be possible.
Date: January 23, 2018
Creator: Hedlof, R. M. & Ordonez, Carlos A.
System: The UNT Digital Library
ASSEMBLY AND TEST OF A 120 MM BORE 15 T NB3SN QUADRUPOLE FOR THE LHC UPGRADE (open access)

ASSEMBLY AND TEST OF A 120 MM BORE 15 T NB3SN QUADRUPOLE FOR THE LHC UPGRADE

In support of the Large Hadron Collider (LHC) luminosity upgrade, the US LHC Accelerator Research Program (LARP) has been developing a 1-meter long, 120 mm bore Nb{sub 3}Sn IR quadrupole magnet (HQ). With a design short sample gradient of 219 T/m at 1.9 K and a peak field approaching 15 T, one of the main challenges of this magnet is to provide appropriate mechanical support to the coils. Compared to the previous LARP Technology Quadrupole and Long Quadrupole magnets, the purpose of HQ is also to demonstrate accelerator quality features such as alignment and cooling. So far, 8 HQ coils have been fabricated and 4 of them have been assembled and tested in HQ01a. This paper presents the mechanical assembly and test results of HQ01a.
Date: May 23, 2010
Creator: Felice, H.; Caspi, S.; Cheng, D.; Dietderich, D.; Ferracin, P.; Hafalia, R. et al.
System: The UNT Digital Library
Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies (open access)

Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

Background-Through the Community Sequencing Program, a catfish EST sequencing project was carried out through a collaboration between the catfish research community and the Department of Energy's Joint Genome Institute. Prior to this project, only a limited EST resource from catfish was available for the purpose of SNP identification. Results-A total of 438,321 quality ESTs were generated from 8 channel catfish (Ictalurus punctatus) and 4 blue catfish (Ictalurus furcatus) libraries, bringing the number of catfish ESTs to nearly 500,000. Assembly of all catfish ESTs resulted in 45,306 contigs and 66,272 singletons. Over 35percent of the unique sequences had significant similarities to known genes, allowing the identification of 14,776 unique genes in catfish. Over 300,000 putative SNPs have been identified, of which approximately 48,000 are high-quality SNPs identified from contigs with at least four sequences and the minor allele presence of at least two sequences in the contig. The EST resource should be valuable for identification of microsatellites, genome annotation, large-scale expression analysis, and comparative genome analysis. Conclusions-This project generated a large EST resource for catfish that captured the majority of the catfish transcriptome. The parallel analysis of ESTs from two closely related Ictalurid catfishes should also provide powerful means for the …
Date: March 23, 2010
Creator: Catfish Genome Consortium
System: The UNT Digital Library
Assessing the Effects of Data Compression in Simulations Using Physically Motivated Metrics (open access)

Assessing the Effects of Data Compression in Simulations Using Physically Motivated Metrics

None
Date: April 23, 2013
Creator: Laney, D; Langer, S; Weber, C; Lindstrom, P & Wegener, A
System: The UNT Digital Library
Atmospheric Dispersion Modeling: Challenges of the Fukushima Dai-ichi Response (open access)

Atmospheric Dispersion Modeling: Challenges of the Fukushima Dai-ichi Response

None
Date: December 23, 2011
Creator: Sugiyama, G.; Nasstrom, J.; Pobanz, B.; Foster, K.; Simpson, M.; Vogt, P. et al.
System: The UNT Digital Library
Atomic-level cotrol of the thermoelectric properties in polytypoid nanowires (open access)

Atomic-level cotrol of the thermoelectric properties in polytypoid nanowires

Thermoelectric materials have generated interest as a means of increasing the efficiency of power generation through the scavenging of waste heat. Materials containing nanometer-sized structural and compositional features can exhibit enhanced thermoelectric performance due to the decoupling of certain electrical and thermal properties, but the extent to which these features can be controlled is often limited. Here we report a simple synthesis of M{sub 2}O{sub 3}(ZnO){sub n} (M = In, Ga, Fe) nanowires with controllable polytypoid structures, where the nanostructured features are tuned by adjusting the amount of metal precursor. After the introduction of nanometer-scale features (individual atomic layers and alloying), thermal and electrical measurements on single In{sub 2-x}Ga{sub x}O3(ZnO){sub n} nanowires reveal a simultaneous improvement in all contributing factors to the thermoelectric figure of merit, indicating successful modification of the nanowire transport properties.
Date: October 23, 2010
Creator: Andrews, Sean C.; Fardy, Melissa A.; Moore, Michael C.; Aloni, Shaoul; Zhang, Minjuan; Radmilovic, Velimir et al.
System: The UNT Digital Library
Attention-Based Dense Point Cloud Reconstruction From a Single Image (open access)

Attention-Based Dense Point Cloud Reconstruction From a Single Image

Article proposes a two-stage training dense point cloud generation network.
Date: September 23, 2019
Creator: Lu, Qiang; Xiao, Mingjie; Lu, Yiyang; Yuan, Xiaohui & Yu, Ye
System: The UNT Digital Library
AutomaDeD: Automata-Based Debugging for Dissimilar Parallel Tasks (open access)

AutomaDeD: Automata-Based Debugging for Dissimilar Parallel Tasks

Today's largest systems have over 100,000 cores, with million-core systems expected over the next few years. This growing scale makes debugging the applications that run on them a daunting challenge. Few debugging tools perform well at this scale and most provide an overload of information about the entire job. Developers need tools that quickly direct them to the root cause of the problem. This paper presents AutomaDeD, a tool that identifies which tasks of a large-scale application first manifest a bug at a specific code region at a specific point during program execution. AutomaDeD creates a statistical model of the application's control-flow and timing behavior that organizes tasks into groups and identifies deviations from normal execution, thus significantly reducing debugging effort. In addition to a case study in which AutomaDeD locates a bug that occurred during development of MVAPICH, we evaluate AutomaDeD on a range of bugs injected into the NAS parallel benchmarks. Our results demonstrate that detects the time period when a bug first manifested itself with 90% accuracy for stalls and hangs and 70% accuracy for interference faults. It identifies the subset of processes first affected by the fault with 80% accuracy and 70% accuracy, respectively and the …
Date: March 23, 2010
Creator: Bronevetsky, G; Laguna, I; Bagchi, S; de Supinski, B R; Ahn, D & Schulz, M
System: The UNT Digital Library