Resource Type

Visual Data Exploration and Analysis -- Report of theVisualization Breakout Session at the 2003 SCaLeS Workshop - VolumeII (open access)

Visual Data Exploration and Analysis -- Report of theVisualization Breakout Session at the 2003 SCaLeS Workshop - VolumeII

This article describes the role of scientific visualizationin computational and experimental sciences with emphasis upon futureresearch challenges.
Date: January 12, 2004
Creator: Bethel, W.; Frank, R.; Fulcomer, S.; Hansen, C.; Joy, k.; Kohl, J. et al.
System: The UNT Digital Library
Vacuum Technology (open access)

Vacuum Technology

The environmental condition called vacuum is created any time the pressure of a gas is reduced compared to atmospheric pressure. On earth we typically create a vacuum by connecting a pump capable of moving gas to a relatively leak free vessel. Through operation of the gas pump the number of gas molecules per unit volume is decreased within the vessel. As soon as one creates a vacuum natural forces (in this case entropy) work to restore equilibrium pressure; the practical effect of this is that gas molecules attempt to enter the evacuated space by any means possible. It is useful to think of vacuum in terms of a gas at a pressure below atmospheric pressure. In even the best vacuum vessels ever created there are approximately 3,500,000 molecules of gas per cubic meter of volume remaining inside the vessel. The lowest pressure environment known is in interstellar space where there are approximately four molecules of gas per cubic meter. Researchers are currently developing vacuum technology components (pumps, gauges, valves, etc.) using micro electro mechanical systems (MEMS) technology. Miniature vacuum components and systems will open the possibility for significant savings in energy cost and will open the doors to advances in …
Date: October 15, 2004
Creator: Biltoft, P. J.
System: The UNT Digital Library
Storing Waste in Ceramic (open access)

Storing Waste in Ceramic

Not all the nuclear waste destined for Yucca Mountain is in the form of spent fuel. Some of it will be radioactive waste generated from the production of nuclear weapons. This so-called defense waste exists mainly as corrosive liquids and sludge in underground tanks. An essential task of the U.S. high-level radioactive waste program is to process these defense wastes into a solid material--called a waste form. An ideal waste form would be extremely durable and unreactive with other repository materials. It would be simple to fabricate remotely so that it could be safely transported to a repository for permanent storage. What's more, the material should be able to tolerate exposure to intense radiation without degradation. And to minimize waste volume, the material must be able to contain high concentrations of radionuclides. The material most likely to be used for immobilization of radioactive waste is glass. Glasses are produced by rapid cooling of high-temperature liquids such that the liquid-like non-periodic structure is preserved at lower temperatures. This rapid cooling does not allow enough time for thermodynamically stable crystalline phases (mineral species) to form. In spite of their thermodynamic instability, glasses can persist for millions of years. An alternate to glass …
Date: July 20, 2004
Creator: Bourcier, W. L. & Sickafus, K.
System: The UNT Digital Library
Application of NMR Methods to Identify Detection Reagents for Use in the Development of Robust Nanosensors (open access)

Application of NMR Methods to Identify Detection Reagents for Use in the Development of Robust Nanosensors

Nuclear Magnetic Resonance (NMR) spectroscopy is a powerful technique for studying bi-molecular interactions at the atomic scale. Our NMR lab is involved in the identification of small molecules, or ligands that bind to target protein receptors, such as tetanus (TeNT) and botulinum (BoNT) neurotoxins, anthrax proteins and HLA-DR10 receptors on non-Hodgkin's lymphoma cancer cells. Once low affinity binders are identified, they can be linked together to produce multidentate synthetic high affinity ligands (SHALs) that have very high specificity for their target protein receptors. An important nanotechnology application for SHALs is their use in the development of robust chemical sensors or biochips for the detection of pathogen proteins in environmental samples or body fluids. Here, we describe a recently developed NMR competition assay based on transferred nuclear Overhauser effect spectroscopy (trNOESY) that enables the identification of sets of ligands that bind to the same site, or a different site, on the surface of TeNT fragment C (TetC) than a known ''marker'' ligand, doxorubicin. Using this assay, we can identify the optimal pairs of ligands to be linked together for creating detection reagents, as well as estimate the relative binding constants for ligands competing for the same site.
Date: April 29, 2004
Creator: Cosman, M; Krishnan, V V & Balhorn, R
System: The UNT Digital Library
Yang-Mills Fields and the Lattice. (open access)

Yang-Mills Fields and the Lattice.

The Yang-Mills theory lies at the heart of our understanding of elementary particle interactions. For the strong nuclear forces, we must understand this theory in the strong coupling regime. The primary technique for this is the lattice. While basically an ultraviolet regulator, the lattice avoids the use of a perturbative expansion. I discuss some of the historical circumstances that drove us to this approach, which has had immense success, convincingly demonstrating quark confinement and obtaining crucial properties of the strong interactions from first principles.
Date: May 18, 2004
Creator: Creutz, M.
System: The UNT Digital Library
Extended Community: An Oral History of the Community Environmental Monitoring Program (CEMP), 1989 - 2003 (open access)

Extended Community: An Oral History of the Community Environmental Monitoring Program (CEMP), 1989 - 2003

Studying the Community Environmental Monitoring Program (CEMP) provides a unique opportunity to trace a concept created by two nuclear industry originators from inception, as it transitioned through several stewardship agencies, to management by a non-profit organization. This transition is informed not only by changes over two decades in the views of the general populace toward nuclear testing but also by changing political climates and public policies. Several parallel histories accompanied the development of the CEMP: an administrative history, an environmental history, and a history of changing public perception of not only nuclear testing, but other activities involving radiation such as waste transportation, as well. Although vital, those histories will be provided only as background to the subject of this study, the oral histories gathered in this project. The oral histories collected open a window into the nuclear testing history of Nevada and Utah that has not heretofore been opened. The nuclear industry has generated a great deal of positive and negative reaction since its inception. The CEMP emerged with specific objectives. It was designed to provide information to potential downwind communities and counter negative perceptions by creating more community involvement and education about the testing. The current objectives of the …
Date: July 1, 2004
Creator: DeSilva, Susan
System: The UNT Digital Library
Solar Decathlon 2002: The Event in Review (open access)

Solar Decathlon 2002: The Event in Review

This book describes the first Solar Decathlon, a competition for college and university students, which took place on the National Mall in fall 2002. Student teams competed to design, build, and operate the most attractive, energy-efficient house that used only solar energy. In addition to the competition, the Solar Decathlon was also a public event. The book describes the events on the Mall, including technical details about the ten contests that comprised the competition and descriptions of the public's and the media's responses to the event. The book also provides information about the student teams' activities in the year and a half before they arrived to compete on the Mall.
Date: June 1, 2004
Creator: Eastment, M.; Hayter, S.; Nahan, R.; Stafford, B.; Warner, C.; Hancock, E. et al.
System: The UNT Digital Library
Archaeofaunal insights on pinniped-human interactions in the northeastern Pacific (open access)

Archaeofaunal insights on pinniped-human interactions in the northeastern Pacific

Human exploitation of pinnipeds has considerable antiquity but shows increasing impacts on population numbers in the Holocene. Pinnipeds are a rich source of fat as well as protein. A few well-documented cases of regional extirpation of seals and sea lions by non-industrial peoples exist. The northeastern Pacific region, from southern California to Alaska, has yielded archaeological evidence for distributions and abundances of eared seals that differs markedly from historically documented biogeography. This is especially true of the northern fur seal (Callorhinus ursinus), among the most common pinnipeds in many archaeological sites from the Santa Barbara Channel area through to Kodiak Islands. This chapter reviews contemporary eared seal biogeography, evidence for the earlier timing and extent, of occurrence of northern fur seals along the northeastern Pacific coast, zooarchaeological and isotopic evidence for their foraging and probable maintenance of rookeries in lower latitudes, and for their disappearance from the southernmost part of their ancient distribution well before European contact. It also reviews ongoing debates over the behavioral ecology of ancient fur seals and over humans role in contributing to their disappearance.
Date: February 7, 2004
Creator: Gifford-Gonzales, D; Newsome, S; Koch, P; Guilderson, T; Snodgrass, J & Burton, R
System: The UNT Digital Library
Solid Nitrogen at Extreme Conditions of High Pressure and Temperature (open access)

Solid Nitrogen at Extreme Conditions of High Pressure and Temperature

We review the phase diagram of nitrogen in a wide pressure and temperature range. Recent optical and x-ray diffraction studies at pressures up to 300 GPa and temperatures in excess of 1000 K have provided a wealth of information on the transformation of molecular nitrogen to a nonmolecular (polymeric) semiconducting and two new molecular phases. These newly found phases have very large stability (metastability) range. Moreover, two new molecular phases have considerably different orientational order from the previously known phases. In the iota phase (unlike most of other known molecular phases), N{sub 2} molecules are orientationally equivalent. The nitrogen molecules in the theta phase might be associated into larger aggregates, which is in line with theoretical predictions on polyatomic nitrogen.
Date: April 5, 2004
Creator: Goncharov, A. & Gregoryanz, E.
System: The UNT Digital Library
Gold Cluster Labels and Related Technologies in Molecular Morphology. (open access)

Gold Cluster Labels and Related Technologies in Molecular Morphology.

Although intensely colored, even the largest colloidal gold particles are not, on their own, sufficiently colored for routine use as a light microscopy stain: only with very abundant antigens or with specialized illumination methods can bound gold be seen. Colloidal gold probes were developed primarily as markers for electron microscopy, for which their very high electron density and selectivity for narrow size distributions when prepared in different ways rendered them highly suited. The widespread use of gold labeling for light microscopy was made possible by the introduction of autometallographic enhancement methods. In these processes, the bound gold particles are exposed to a solution containing metal ions and a reducing agent; they catalyze the reduction of the ions, resulting in the deposition of additional metal selectively onto the particles. On the molecular level, the gold particles are enlarged up to 30-100 nm in diameter; on the macroscale level, this results in the formation of a dark stain in regions containing bound gold particles, greatly increasing visibility and contrast. The applications of colloidal gold have been described elsewhere in this chapter, we will focus on the use of covalently linked cluster complexes of gold and other metals. A gold cluster complex is …
Date: February 4, 2004
Creator: Hainfeld, J. F. & Powell, R. D.
System: The UNT Digital Library
Restoring Native Grasslands (open access)

Restoring Native Grasslands

This document provides information about restoring Texas grassland, range management, and watershed management.
Date: August 2004
Creator: Hays, K. Brian
System: The Portal to Texas History
Brain Injury (open access)

Brain Injury

This booklet was prepared and distributed by the Brain Injury Association of Texas to answer the questions of brain injured persons' family, friends, and caretakers.
Date: April 2004
Creator: Hutchison, Ruth
System: The Portal to Texas History
Laser Fusion: The First Ten Years 1962-1972 (open access)

Laser Fusion: The First Ten Years 1962-1972

This account of the beginning of the program on laser fusion at Livermore in 1962, and its subsequent development during the decade ending in 1972, was originally prepared as a contribution to the January 1991 symposium 'Achievements in Physics' honoring Professor Keith Brueckner upon his retirement from the University of San Diego at La Jolla. It is a personal recollection of work at Livermore from my vantage point as its scientific leader, and of events elsewhere that I thought significant. This period was one of rapid growth in which the technology of high-power short-pulse lasers needed to drive the implosion of thermonuclear fuel to the temperature and density needed for ignition was developed, and in which the physics of the interaction of intense light with plasmas was explored both theoretically and experimentally.
Date: June 25, 2004
Creator: Kidder, R. E.
System: The UNT Digital Library
Correlation Profiles and Motifs in Complex Networks. (open access)

Correlation Profiles and Motifs in Complex Networks.

Networks have recently emerged as a unifying theme in complex systems research [1]. It is in fact no coincidence that networks and complexity are so heavily intertwined. Any future definition of a complex system should reflect the fact that such systems consist of many mutually interacting components. These components are far from being identical as say electrons in systems studied by condensed matter physics. In a truly complex system each of them has a unique identity allowing one to separate it from the others. The very first question one may ask about such a system is which other components a given component interacts with? This information system wide can be visualized as a graph, whose nodes correspond to individual components of the complex system in question and edges to their mutual interactions. Such a network can be thought of as a backbone of the complex system. Of course, system's dynamics depends not only on the topology of an underlying network but also on the exact form of interaction of components with each other, which can be very different in various complex systems. However, the underlying network may contain clues about the basic design principles and/or evolutionary history of the complex …
Date: January 16, 2004
Creator: Maslov, S.; Sneppen, K. & Alon, U.
System: The UNT Digital Library
Bridging the Gap between Quantum Mechanics and Large-Scale Atomistic Simulation (open access)

Bridging the Gap between Quantum Mechanics and Large-Scale Atomistic Simulation

The prospect of modeling across disparate length and time scales to achieve a predictive multiscale description of real materials properties has attracted widespread research interest in the last decade. To be sure, the challenges in such multiscale modeling are many, and in demanding cases, such as mechanical properties or dynamic phase transitions, multiple bridges extending from the atomic level all the way to the continuum level must be built. Although often overlooked in this process, one of the most fundamental and important problems in multiscale modeling is that of bridging the gap between first-principles quantum mechanics, from which true predictive power for real materials emanates, and the large-scale atomistic simulation of thousands or millions of atoms, which is usually essential to describe the complex atomic processes that link to higher length and time scales. For example, to model single-crystal plasticity at micron length scales via dislocation-dynamics simulations that evolve the detailed dislocation microstructure requires accurate large-scale atomistic information on the mobility and interaction of individual dislocations. Similarly, modeling the kinetics of structural phase transitions requires linking accurate large-scale atomistic information on nucleation processes with higher length and time scale growth processes.
Date: August 16, 2004
Creator: Moriarty, J. A.
System: The UNT Digital Library
The 9/11 Commission Report: Final Report of the National Commission on Terrorist Attacks Upon the United States (open access)

The 9/11 Commission Report: Final Report of the National Commission on Terrorist Attacks Upon the United States

The official Government edition of the Final Report of the National Commission on Terrorist Attacks Upon the United States (also known as the 9-11 Commission, an independent, bipartisan commission created by congressional legislation and the signature of President George W. Bush in late 2002), provides a full and complete account of the circumstances surrounding the September 11, 2001 terrorist attacks, including preparedness for and the immediate response to the attacks. Provides recommendations designed to guard against future attacks.
Date: July 22, 2004
Creator: National Commission on Terrorist Attacks upon the United States
System: The UNT Digital Library
Hyperspectral Geobotanical Remote Sensing for CO2 Storage Monitoring (open access)

Hyperspectral Geobotanical Remote Sensing for CO2 Storage Monitoring

This project's goal is to develop remote sensing methods for early detection and spatial mapping, over whole regions simultaneously, of any surface areas under which there are significant CO2 leaks from deep underground storage formations. If large amounts of CO2 gas percolated up from a storage formation below to within plant root depth of the surface, the CO2 soil concentrations near the surface would become elevated and would affect individual plants and their local plant ecologies. Excessive soil CO2 concentrations are observed to significantly affect local plant and animal ecologies in our geothermal exploration, remote sensing research program at Mammoth Mountain CA USA. We also know from our geothermal exploration remote sensing programs, that we can map subtle hidden faults by spatial signatures of altered minerals and of plant species and health distributions. Mapping hidden faults is important because in our experience these highly localized (one to several centimeters) spatial pathways are good candidates for potentially significant CO2 leaks from deep underground formations. The detection and discrimination method we are developing uses primarily airborne hyperspectral, high spatial (3 meter) with 128 band wavelength resolution, visible and near infrared reflected light imagery. We also are using the newly available ''Quickbird'' satellite …
Date: May 14, 2004
Creator: Pickles, W & Cover, W
System: The UNT Digital Library
Spectroscopy of ions using fast beams and ion traps (open access)

Spectroscopy of ions using fast beams and ion traps

A knowledge of the spectra of ionized atoms is of importance in many fields. They can be studied in a wide variety of light sources. In recent years techniques coming under the broad heatings of fast beams and ion traps have been used extensively for such investigations. This article considers the advantages that various techniques have for particular applications.
Date: October 1, 2004
Creator: Pinnington, E. H. & Trabert, E.
System: The UNT Digital Library
Potential energy sputtering of EUVL materials (open access)

Potential energy sputtering of EUVL materials

Of the many candidates employed for understanding the erosion of critical Extreme Ultraviolet Lithography (EUVL) components, potential energy damage remains relatively uninvestigated. Unlike the familiar kinetic energy sputtering, which is a consequence of the momentum transferred by an ion to atoms in the target, potential energy sputtering occurs when an ion rapidly collects charge from the target as it neutralizes. Since the neutralization energy of a singly charged ion is typically on the order of 10 eV, potential energy effects are generally neglected for low charge state ions, and hence the bulk of the sputtering literature. As an ion's charge state is increased, the potential energy (PE) increases rapidly, e.g. PE(Xe{sup 1+})= 11 eV, PE(Xe{sup 10+}) = 810 eV, PE(Xe{sup 20+}) = 4.6 keV, etc. By comparison, the binding energy of a single atom on a surface is typically about 5 eV, so even relatively inefficient energy transfer mechanisms can lead to large quantities of material being removed, e.g. 25% efficiency for Xe{sup 10+} corresponds to {approx} 40 atoms/ion. By comparison, singly charged xenon ions with {approx} 20 keV of kinetic energy sputter only about 5 atoms/ion at normal incidence, and less than 1 atom/ion at typical EUV source energies. …
Date: July 2, 2004
Creator: Pomeroy, J. M.; Ratliff, L. P.; Gillaspy, J. D. & Bajt, S.
System: The UNT Digital Library
Corrosion Behavior of Nickel Alloys in Wet Hydrofluoric Acid (open access)

Corrosion Behavior of Nickel Alloys in Wet Hydrofluoric Acid

Hydrofluoric acid is a water solution of hydrogen fluoride (HF). Hydrofluoric acid is used widely in diverse types of industrial applications; traditionally, it is used in pickling solutions in the metal industry, in the fabrication of chlorofluorocarbon compounds, as an alkylation agent for gasoline and as an etching agent in the industry of glass. In recent years, hydrofluoric acid has extensively been used in the manufacture of semiconductors and microelectronics during the wet chemical cleaning of silicon wafers. Hydrofluoric acid can be considered a reducing acid and although it is chemically classified as weaker than, for example, sulfuric or hydrochloric acids, it is extremely corrosive. This acid is also particularly toxic and poses greater health hazard than most other acids. The corrosion behavior of metals in hydrofluoric acid has not been as systematic studied in the laboratory as for other common inorganic acids. This is largely because tests using hydrofluoric acid cannot be run in standard equipment and because of the toxic nature of this acid. Moreover, short-term weight loss laboratory corrosion tests in hydrofluoric acid can be frustrating since the results are not as highly reproducible as in the case of other acids such as sulfuric or hydrochloric. One …
Date: February 6, 2004
Creator: Rebak, R. B.
System: The UNT Digital Library
Environmentally Assisted Cracking of Nickel Alloys (open access)

Environmentally Assisted Cracking of Nickel Alloys

Environmentally Assisted Cracking (EAC) is a general term that includes phenomena such as stress corrosion cracking (SCC), hydrogen embrittlement (HE), sulfide stress cracking (SSC), liquid metal embrittlement (LME), etc. EAC refers to a phenomenon by which a normally ductile metal looses its toughness (e.g. elongation to rupture) when it is subjected to mechanical stresses in presence of a specific corroding environment. For EAC to occur, three affecting factors must be present simultaneously. These include: (1) Mechanical tensile stresses, (2) A susceptible metal microstructure and (3) A specific aggressive environment. If any of these three factors is removed, EAC will not occur. That is, to mitigate the occurrence of EAC, engineers may for example eliminate residual stresses in a component or limit its application to certain chemicals (environment). The term environment not only includes chemical composition of the solution in contact with the component but also other variables such as temperature and applied potential. Nickel alloys are in general more resistant than stainless steels to EAC. For example, austenitic stainless steels (such as S30400) suffer SCC in presence of hot aqueous solutions containing chloride ions. Since chloride ions are ubiquitous in most industrial applications, the use of stressed stainless steels parts …
Date: February 6, 2004
Creator: Rebak, R. B.
System: The UNT Digital Library
A multi-scale approach to molecular dynamics simulations of shock waves (open access)

A multi-scale approach to molecular dynamics simulations of shock waves

Study of the propagation of shock waves in condensed matter has led to new discoveries ranging from new metastable states of carbon [1] to the metallic conductivity of hydrogen in Jupiter, [2] but progress in understanding the microscopic details of shocked materials has been extremely difficult. Complications can include the unexpected formation of metastable states of matter that determine the structure, instabilities, and time-evolution of the shock wave. [1,3] The formation of these metastable states can depend on the time-dependent thermodynamic pathway that the material follows behind the shock front. Furthermore, the states of matter observed in the shock wave can depend on the timescale on which observation is made. [4,1] Significant progress in understanding these microscopic details has been made through molecular dynamics simulations using the popular non-equilibrium molecular dynamics (NEMD) approach to atomistic simulation of shock compression. [5] The NEMD method involves creating a shock at one edge of a large system by assigning some atoms at the edge a fixed velocity. The shock propagates across the computational cell to the opposite side. The computational work required by NEMD scales at least quadratically in the evolution time because larger systems are needed for longer simulations to prevent the …
Date: September 3, 2004
Creator: Reed, E. J.; Fried, L. E.; Manaa, M. R. & Joannopoulos, J. D.
System: The UNT Digital Library
Soil Survey of Fayette County, Texas (open access)

Soil Survey of Fayette County, Texas

Text describes the area, climate, agricultural history and statistics, soil-survey methods and definitions, soils and crops, land uses and agricultural methods, irrigation, and morphology and genesis of soils of Fayette County, Texas.
Date: 2004
Creator: Ressel, Dennis D.; Brown, Samuel E.; Bruns, Roy H.L.; Douglass, James A.; Trevino, Anita & Wagner, John D.
System: The Portal to Texas History
Modelling the Madden Julian Oscillation (open access)

Modelling the Madden Julian Oscillation

The MJO has long been an aspect of the global climate that has provided a tough test for the climate modelling community. Since the 1980s there have been numerous studies of the simulation of the MJO in atmospheric general circulation models (GCMs), ranging from Hayashi and Golder (1986, 1988) and Lau and Lau (1986), through to more recent studies such as Wang and Schlesinger (1999) and Wu et al. (2002). Of course, attempts to reproduce the MJO in climate models have proceeded in parallel with developments in our understanding of what the MJO is and what drives it. In fact, many advances in understanding the MJO have come through modeling studies. In particular, failure of climate models to simulate various aspects of the MJO has prompted investigations into the mechanisms that are important to its initiation and maintenance, leading to improvements both in our understanding of, and ability to simulate, the MJO. The initial focus of this chapter will be on modeling the MJO during northern winter, when it is characterized as a predominantly eastward propagating mode and is most readily seen in observations. Aspects of the simulation of the MJO will be discussed in the context of its sensitivity …
Date: May 21, 2004
Creator: Slingo, J. M.; Inness, P. M. & Sperber, K. R.
System: The UNT Digital Library