Triplication of a wavefront, also classically known as birefringence, can and does occur in transversely isotropic (TI) media. With the growing interest in shear waves, and in particular, converted shear waves, it becomes necessary to study this phenomenon, and the bright spots that accompany it. In a plane that includes the medium's rotational symmetry axis, there may exist a range of angles within which the qSV wave, whose polarization lies in that plane, may propagate at three distinct velocities. The region of the qSV wave curve where this can occur always corresponds to the region of the qSV slowness curve where the closed qSV curve about the origin is concave. When the range of angles is small and the three arrivals are close together, the usual situation, the qSV wave within that small range will be significantly brighter than in other directions. When the range of angles is large, the two cusps of the wave surface, on the borders of the region of triplication will both be bright spots.

Some genes produce transcripts that function directly in regulatory, catalytic, or structural roles in the cell. These non-coding RNAs are prevalent in all living organisms, and methods that aid the understanding of their functional roles are essential. RNA secondary structure, the pattern of base-pairing, contains the critical information for determining the three dimensional structure and function of the molecule. In this work we examine whether the basic geometric and topological properties of secondary structure are sufficient to distinguish between RNA families in a learning framework. First, we develop a labeled dual graph representation of RNA secondary structure by adding biologically meaningful labels to the dual graphs proposed by Gan et al [1]. Next, we define a similarity measure directly on the labeled dual graphs using the recently developed marginalized kernels [2]. Using this similarity measure, we were able to train Support Vector Machine classifiers to distinguish RNAs of known families from random RNAs with similar statistics. For 22 of the 25 families tested, the classifier achieved better than 70% accuracy, with much higher accuracy rates for some families. Training a set of classifiers to automatically assign family labels to RNAs using a one vs. all multi-class scheme also yielded encouraging …

Because of their intrinsic brightness, supernovae make excellent cosmological probes. We describe the spectral-fitting expanding atmosphere method (SEAM) for obtaining distances to Type IIP supernovae (SNe IIP) and present a distance to SN 1999em for which a Cepheid distance exists. Our models give results consistent with the Cepheid distance, even though we have not attempted to tune the underlying hydrodynamical model but have simply chosen the best fits. This is in contradistinction to the expanding photosphere method (EPM), which yields a distance to SN 1999em that is 50 percent smaller than the Cepheid distance. We emphasize the differences between the SEAM and the EPM. We show that the dilution factors used in the EPM analysis were systematically too small at later epochs. We also show that the EPM blackbody assumption is suspect. Since SNe IIP are visible to redshifts as high as z {approx}< 6, with the James Webb Space Telescope, the SEAM may be a valuable probe of the early universe.

In the years 1998, 2000, and 2001, long-offset transientelectromagnetic (LOTEM) surveys were carried out at the active volcanoMerapi in Central Java. The measurements investigated the conductivitystructure of the volcanic edifice. Our area of interest, which is belowthe summit and the upper flanks, was investigated using horizontal andvertical magnetic field time derivative data from seventransmitter-receiver setups. Because of topography and athree-dimensional (3-D) underground structure, a 3-D interpretation isused. The method optimizes few parameters of a 3-D model by a stableleast squares joint inversion of the data, providing sufficientresolution capability. Reasonable data fits are achieved with anonhorizontally layered model featuring a very conductive basement belowdepths of 1.5 km. While hydrothermal alteration is also considered, wetentatively explain the high conductivities by aqueous solutions withrelatively high salt contents. A large magma body or a small superficialreservoir below Merapi's central volcanic complex, as discussed by otherauthors, cannot be resolved by the LOTEM data.

Heightened biological activity was observed in February 1996in the high-nutrient low-chlorophyll (HNLC) subarctic North PacificOcean, a region that is thought to beiron-limited. Here we provideevidence supporting the hypothesis that Ocean Station Papa (OSP) in thesubarctic Pacific received a lateral supply of particulate iron from thecontinental margin off the Aleutian Islands in the winter, coincidentwith the observed biological bloom. Synchrotron X-ray analysis was usedto describe the physical form, chemistry, and depth distributions of ironin size fractionated particulate matter samples. The analysis revealsthat discrete micron-sized iron-rich hotspots are ubiquitous in the upper200m at OSP, more than 900km from the closest coast. The specifics of thechemistry and depth profiles of the Fe hot spots trace them to thecontinental margins. We thus hypothesize that iron hotspots are a markerfor the delivery of iron from the continental margin. We confirm thedelivery of continental margin iron to the open ocean using an oceangeneral circulation model with an iron-like tracer source at thecontinental margin. We suggest that iron from the continental marginstimulated a wintertime phytoplankton bloom, partially relieving the HNLCcondition.

None

To determine prospectively whether physical activity canprevent age-related weight gain and whether changing levels of activityaffect body weight. DESIGN/SUBJECTS: The study consisted of 8,080 maleand 4,871 female runners who completed two questionnaires an average(+/-standard deviation (s.d.)) of 3.20+/-2.30 and 2.59+/-2.17 yearsapart, respectively, as part of the National Runners' Health Study.RESULTS: Changes in running distance were inversely related to changes inmen's and women's body mass indices (BMIs) (slope+/-standard error(s.e.): -0.015+/-0.001 and -0.009+/-0.001 kg/m(2) per Deltakm/week,respectively), waist circumferences (-0.030+/-0.002 and -0.022+/-0.005 cmper Deltakm/week, respectively) and percent changes in body weight(-0.062+/-0.003 and -0.041+/-0.003 percent per Deltakm/week,respectively, all P<0.0001). The regression slopes were significantlysteeper (more negative) in men than women for DeltaBMI and Deltapercentbody weight (P<0.0001). A longer history of running diminishedthe impact of changing running distance on men's weights. When adjustedfor Deltakm/week, years of aging in men and years of aging in women wereassociated with increases of 0.066+/-0.005 and 0.056+/-0.006 kg/m(2) inBMI, respectively, increases of 0.294+/-0.019 and 0.279+/-0.028 percentin Delta percentbody weight, respectively, and increases of 0.203+/-0.016and 0.271+/-0.033 cm in waist circumference, respectively (allP<0.0001). These regression slopes suggest that vigorous exercise mayneed to increase 4.4 km/week annually in men and 6.2 km/week annually inwomen to compensate for the expected gain in weight associated …

Snow anomalies in the western United States (U.S.) have beenwidely investigated by many researchers due to its impact on wateravailability. This study focuses on how anomalous atmospheric circulationaffects snowpack accumulation in the western U.S. using observations andoutput from the National Center for Atmospheric Research (NCAR) CommunityClimate Model version 3 (CCM3). Our results indicate that themid-latitude atmospheric circulation anomalies induced by the ElNino-Southern Oscillation (ENSO) tend to drive winter precipitationshifts, leading to an anomalous snowpack distribution in the western U.S.The warm phase of ENSO produces increased snowpack in the Southwest,while the cold phase of ENSO generates increased snowpack in theNorthwest. Temperature has a secondary impact on the anomalous snowpackdistribution during ENSO episodes. Additionally, the non-linearatmospheric dynamics-related Pacific-North American (PNA) pattern isfound to strongly affect snow anomalies in the western U.S. independentfrom ENSO. The positive phase of the PNA pattern produces coldertemperature and stronger precipitation due to the lower pressure in theregion, leading to an above normal snowpack. Conversely, the negativephase of the PNA pattern generates warmer temperature and weakerprecipitation resulting from the higher pressure, producing a below thannormal snowpack in the western U.S. In general, the NCAR-CCM3 reproducesthe observed processes. However, model biases are identified andreported. The information provided in this …

None

The use of fs lasers to directly write photonic structures inside a glass has great potential as a fabrication method for three-dimensional all-optical integrated components. The ability to use this technique with different glass compositions--specifically tailored for a specific photonics application--is critical to its successful exploitation. Consequently, it is important to understand how glass composition effects waveguide fabrication with fs laser pulses and how different glasses are structurally modified after exposure to fs laser pulses. We have used confocal laser spectroscopy to monitor the changes in glass structure that are associated with waveguide fabrication. Using a low power continuous wave (cw) Ar laser as excitation source we have measured both Raman and fluorescence spectra of the modified regions. Raman spectroscopy provides us with information on the network structure, whereas fluorescence measurements reveal the presence of optically active point defects in the glass. In this paper we review our work on fs-laser fabrication and characterization of photonic structures in glass and discuss the effect of glass composition on processing parameters and structural modification.

We present experimental results of a study of electromagnetic field generation during underground detonation of high explosive charges in holes bored in sandy loam and granite. Test conditions and physico-mechanical properties of the soil exert significant influence on the parameters of electromagnetic signals generated by underground TNT charges with masses of 2 - 200 kg. The electric and magnetic field experimental data are satisfactorily described by an electric dipole model with the source embedded in a layered media.

This paper describes the design, simulation, construction, and initial performance of a solar water heating system (a 360-tube evacuated-tube heat-pipe solar collector, 54 m2 in gross area, 36 m2 in net absorber area) installed at the top of the hot water recirculation loop in the Social Security Administration's Mid-Atlantic Center in Philadelphia. When solar energy is available, water returning to the hot water storage tank is heated by the solar array. This new approach, in contrast to the more conventional approach of preheating incoming water, is made possible by the thermal diode effect of heat pipes and low heat loss from evacuated-tube solar collectors. The simplicity of this approach and its low installation costs support the deployment of solar energy in existing commercial buildings, especially where the roof is some distance away from the water heating system, which is often in the basement. Initial performance measurements of the system are reported.

Lawrence Livermore National Laboratory (LLNL) routinely uses calorimetry and gamma isotopic analyses (Cal/Iso) for the accountability measurement of plutonium (Pu) bearing items. In the past 15 years, the vast majority of those items measured by Cal/Iso were contained in a thin-walled convenience can enclosed in another thin-walled outer container. However, LLNL has recently begun to use DOE-STD-3013-2000 containers as well. These DOE-STD-3013-2000 containers are comprised of a stainless steel convenience can enclosed in welded stainless steel primary and secondary containers. In addition to the fact that the wall thickness of the DOE-STD-3013-2000 containers is much greater than that of other containers in our experience, the DOE-STD-3013-2000 containers appear to have larger thermal insulation characteristics. To date, we have derived Pu-mass values from Cal/Iso measurements of 74 different DOE-STD-3013-2000 containers filled with Pu-bearing oxide or mixed uranium-plutonium (U-Pu) oxide material. Both water-bath and air-bath calorimeters were used for these measurements and both use software to predict when thermal equilibrium is attained. Our experience has shown that after apparent equilibrium has been attained, at least one more complete cycle, and sometimes two or three more complete cycles, is required to gain a measure of true thermal equilibrium. Otherwise, the derived Pu-mass values …

This paper presents the status of General Atomics Urban Maglev Program. The development provides an innovative approach for low speed transportation suitable for very challenging urban environments. Permanent magnets arranged in a 'Halbach' array configuration produce a relatively stiff magnetic suspension operating with an air gap of 25 mm. The project has progressed from design and prototype hardware testing, to the construction of a 120-meter full-scale test track, located in San Diego, California. Dynamic testing of the levitation, propulsion and guidance systems is being performed.

NSTX High Harmonic Fast Wave (HHFW) current drive discharges will require density control for acceptable efficiency. We have compared boronization on hot and cold surfaces, varying helium glow discharge conditioning (HeGDC) durations, and brief morning boronization with between discharge boronization for improving density control. Access to Ohmic H-modes was enabled by boronization on hot surfaces, however, the duration of the effectiveness of hot and cold boronization was comparable. A 15 min HeGDC between discharges was needed for reproducible L-H transitions. Brief morning boronization followed by a comparable duration of applied HeGDC restored and enhanced good conditions. Additional short boronizations between discharges did not improve plasma performance (reduced recycling, reduced impurity luminosities, earlier L-H transitions, longer plasma current flattops, higher stored energies) if conditions were already good. Between discharge boronization requires increases in the duty cycle due to the need for additional HeGDC to remove co-deposited D{sub 2}.

Under the sponsorship of the U.S. DOE and DHS, we have developed a Computational Fluid Dynamics (CFD) model for simulating airflow and dispersion of chemical/biological agents released in the urban environment. Our model, FEM3MP, is based on solving the three-dimensional, time-dependent, incompressible Navier-Stokes equations on massively parallel computer platforms. The numerical algorithm uses the finite element method for accurate representation of complex building shapes and variable terrain, together with a semi-implicit projection method and modern iterative solvers for efficient time integration (Gresho and Chan, 1998). Physical processes treated in our code include turbulence modeling via the RANS (Reynolds Averaged Navier-Stokes) and LES (Large Eddy Simulation) approaches, atmospheric stability, aerosols, UV radiation decay, surface energy budget, and vegetative canopies, etc.

We have developed a cleaning procedure for aluminum alloys for effective minimization of surface-adsorbed sub-micron particles and non-volatile residue. The procedure consists of a phosphoric acid etch followed by an alkaline detergent wash. To better understand the mechanism whereby this procedure reduces surface contaminants, we characterized the aluminum surface as a function of cleaning step using Surface Enhanced Raman Spectroscopy (SERS). SERS indicates that phosphoric acid etching re-establishes a surface oxide of different characteristics, including deposition of phosphate and increased hydration, while the subsequent alkaline detergent wash appears to remove the phosphate and modify the new surface oxide, possibly leading to a more compact surface oxide. We also studied the zeta potential of &lt;5 micron pure aluminum and aluminum alloy 6061-T6 particles to determine how surface electrostatics may be affected during the cleaning process. The particles show a decrease in the magnitude of their zeta potential in the presence of detergent, and this effect is most pronounced for particles that have been etched with phosphoric acid. This reduction in magnitude of the surface attractive potential is in agreement with our observation that the phosphoric acid etch followed by detergent wash results in a decrease in surface-adsorbed sub-micron particulates.

Small propellant pumps can reduce rocket hardware mass, while increasing chamber pressure to improve specific impulse. The maneuvering requirements for planetary ascent require an emphasis on mass, while those of orbiting spacecraft indicate that I{sub SP} should be prioritized during pump system development. Experimental efforts include initial testing with prototype lightweight components while raising pump efficiency to improve system I{sub SP}.

The classification of time-varying multivariate regional-scale wind fields at a specific location can assist event planning as well as consequence and risk analysis. Further, wind field classification involves data transformation and inference techniques that effectively characterize stochastic wind field variation. Such a classification scheme is potentially useful for addressing overall atmospheric transport uncertainty and meteorological parameter sensitivity issues. Different methods to classify wind fields over a location include the principal component analysis of wind data (e.g., Hardy and Walton, 1978) and the use of cluster analysis for wind data (e.g., Green et al., 1992; Kaufmann and Weber, 1996). The goal of this study is to use a clustering method to classify the winds of a gridded data set, i.e, from meteorological simulations generated by a forecast model.

Even-order Legendre polynomial (P{sub N}) expansion approximations of the neutron transport equation have historically seen only limited practical application. Research in the last decade has resolved one of the historical theoretical objections to the use of even-order PN approximations in planar geometry, namely the ambiguity in the prescription of boundary conditions as a result of an odd number of unknowns. This research also demonstrated the P{sub 2} approximation to be more accurate than the P{sub 1} approximation in planar geometry away from boundary layers and material interfaces. Neither the P{sub 1} nor the P{sub 2} approximation is convincingly more accurate near material interfaces. This progress motivated the reexamination of the multidimensional simplified P{sub 2} (SP{sub 2}) approximation, the development of P{sub 2} approximations for planar geometry stochastic transport problems, and the examination of the P{sub 2} and SP{sub 2} approximations as a synthetic acceleration technique for the discrete ordinates equations. The major remaining objection to even-order PN approximations is that the scalar flux distributions obtained using these approximations can exhibit large spatial discontinuities at material interfaces and source discontinuities. In contrast, the odd-order PN approximations typically utilized give spatially continuous scalar flux distributions at these locations. In this paper, we …

We study the singlet part of the free energy of a static quark anti-quark (Q{bar Q}) pair at finite temperature. The model is three flavor QCD with degenerate quark masses using N{sub {tau}} = 4 and 6 lattices with Asqtad staggered fermion action. We look at thermodynamics of the system around phase transition and study its scaling with lattice spacing and quark masses.

The local structure and composition of Cu ions dispersed in CdSe nanocrystals is examined using soft x-ray absorption near edge spectroscopy (XANES). Using Cu L-edge XANES and X-ray photoelectron measurements (XPS), we find that the Cu ions exist in the Cu(I) oxidation state. We also find that the observed Cu L-edge XANES signal is directly proportional to the molar percent of Cu present in our final material. Se L-edge XANES indicates changes in the Se density of states with Cu doping, due to a chemical bonding effect, and supports a statistical doping mechanism. Photoluminescence (PL) measurements indicate the Cu ions may act as deep electron traps. We show that XANES, XPS, and PL are a powerful combination of methods to study the electronic and chemical structure of dopants in nanostructured materials.

We report on the behavior of ELMs in NBI-heated H-mode plasmas in NSTX. It is observed that the size of Type I ELMs, characterized by the change in plasma energy, decreases with increasing density, as observed at conventional aspect ratio. It is also observed that the Type I ELM size decreases as the plasma equilibrium is shifted from a symmetric double-null toward a lower single-null configuration. Type III ELMs have also been observed in NSTX, as well as a high-performance regime with small ELMs which we designate Type V. These Type V ELMs are consistent with high bootstrap current operation and density approaching Greenwald scaling. The Type V ELMs are characterized by an intermittent n=1 MHD mode rotating counter to the plasma current. Without active pumping, the density rises continuously through the Type V phase. However, efficient in-vessel pumping should allow density control, based on particle containment time estimates.

The Laser Performance Operations Model (LPOM) has been developed to provide real time predictive capabilities for the National Ignition Facility (NIF) at Lawrence Livermore National Laboratory. LPOM uses diagnostic feedback from previous NIF shots to maintain accurate energetics models for each of the 192 NIF beamlines (utilizing one CPU per laser beamline). This model is used to determine the system setpoints (initial power, waveplate attenuations, laser diagnostic settings) required for all requested NIF shots. In addition, LPOM employs optical damage models to minimize the probability that a proposed shot may damage the system. LPOM provides post-shot diagnostic reporting to support the NIF community. LPOM was deployed prior to the first main laser shots in NIF, and has since been used to set up every shot in NIF's first quad (four beamlines). Real-time adjustments of the codes energetics parameters allows the LPOM to predict total energies within 5%, and provide energy balance within the four beamlines to within 2% for shots varying from 0.5 to 26 kJ (1.053 {micro}m) per beamline. The LPOM has been a crucial tool in the commissioning of the first quad of NIF.