The Main Injector Neutrino Oscillation Search (MINOS) is a long baseline neutrino oscillation experiment based at the Fermi National Accelerator Laboratory (FNAL) in Chicago, Illinois. MINOS measures neutrino interactions in two large iron-scintillator tracking/sampling calorimeters; the Near Detector on-site at FNAL and the Far Detector located in the Soudan mine in northern Minnesota. The Near Detector has recorded a large number of neutrino interactions and this high statistics dataset can be used to make precision measurements of neutrino interaction cross sections. The cross section for charged-current quasi-elastic scattering has been measured by a number of previous experiments and these measurements disagree by up to 30%. A method to select a quasi-elastic enriched sample of neutrino interactions in the MINOS Near Detector is presented and a procedure to fit the kinematic distributions of this sample and extract the quasi-elastic cross section is introduced. The accuracy and robustness of the fitting procedure is studied using mock data and finally results from fits to the MINOS Near Detector data are presented.

The first analysis of diffractively produced Z bosons in the muon decay channel is presented, using data taken by the D0 detector at the Tevatron at {radical}s = 1.96 TeV. The data sample corresponds to an integrated luminosity of 109 pb{sup -1}. The diffractive sample is defined using the fractional momentum loss {zeta} of the intact proton or antiproton measured using the calorimeter and muon detector systems. In a sample of 10791 (Z/{gamma})* {yields} {mu}{sup +}{mu}{sup -} events, 24 diffractive candidate events are found with {zeta} < 0.02. The first work towards measuring the cross section times branching ratio for diffractive production of (Z/{gamma})* {yields} {mu}{sup +}{mu}{sup -} is presented for the kinematic region {zeta} < 0.02. The first work towards measuring the cross section times branching ratio for diffractive production of (Z/{gamma})* {yields} {mu}{sup +}{mu}{sup -} is presented for the kinematic region {zeta} < 0.02. The systematic uncertainties are not yet sufficiently understood to present the cross section result. In addition, the first measurement of the efficiency of the Run II D0 Luminosity Monitor is presented, which is used in all cross section measurements. The efficiency is: {var_epsilon}{sub LM} = (90.9 {+-} 1.8)%.

The work exposed in this thesis deals with the search for electroweak production of top quark (single top) in proton-antiproton collisions at {radical}s = 1.96 TeV. This production mode has not been observed yet. Analyzed data have been collected during the Run II of the D0 experiment at the Fermilab Tevatron collider. These data correspond to an integrated luminosity of 370 pb{sup -1}. In the Standard Model, the decay of a top quark always produce a high momentum bottom quark. Therefore bottom quark jets identification plays a major role in this analysis. The large lifetime of b hadrons and the subsequent large impact parameters relative to the interaction vertex of charged particle tracks are used to tag bottom quark jets. Impact parameters of tracks attached to a jet are converted into the probability for the jet to originate from the primary vertex. This algorithm has a 45% tagging efficiency for a 0.5% mistag rate. Two processes (s and t channels) dominate single top production with slightly different final states. The searched signature consists in 2 to 4 jets with at least one bottom quark jet, one charged lepton (electron or muon) and missing energy accounting for a neutrino. This final …

We present the first evidence for electroweak single top quark production using nearly 1 fb{sup -1} of Tevatron Run II data at {radical}s = 1.96 TeV. We select single-top-like data events in the lepton+jets decay channel and separate them from backgrounds using the matrix element analysis method. This technique uses leading order matrix elements to compute an event probability for both signal and background hypotheses. Using the expected signal acceptance, background, and observed data we measure the single top quark cross section: {sigma}(p{bar p} {yields} tb + tqb + X) = 4.6{sub -1.5}{sup +}1.8 pb. The probability for the background to have fluctuated up to give at least the cross section measured in this analysis is 0.21%, which corresponds to a Gaussian equivalent significance of 2.9{sigma}.

Ozone, an ambient pollutant, is transformed into other airborne pollutants in the indoor environment. In this dissertation, the type and amount of byproducts that result from ozone reactions with common indoor surfaces, surface residues, and vapors were determined, pollutant concentrations were related to occupant exposure, and frameworks were developed to predict byproduct concentrations under various indoor conditions. In Chapter 2, an analysis is presented of secondary organic aerosol formation from the reaction of ozone with gas-phase, terpene-containing consumer products in small chamber experiments under conditions relevant for residential and commercial buildings. The full particle size distribution was continuously monitored, and ultrafine and fine particle concentrations were in the range of 10 to>300 mu g m-3. Particle nucleation and growth dynamics were characterized.Chapter 3 presents an investigation of ozone reactions with aircraft cabin surfaces including carpet, seat fabric, plastics, and laundered and worn clothing fabric. Small chamber experiments were used to determine ozone deposition velocities, ozone reaction probabilities, byproduct emission rates, and byproduct yields for each surface category. The most commonly detected byproducts included C1?C10 saturated aldehydes and skin oil oxidation products. For all materials, emission rates were higher with ozone than without. Experimental results were used to predict byproduct exposure …

A review of orbifold geometry is given, followed by a review of the construction of four-dimensional heterotic string models by compactification on a six-dimensional Z{sub 3} orbifold. Particular attention is given to the details of the transition from a classical theory to a first-quantized theory. Subsequently, a discussion is given of the systematic enumeration of all standard-like three generation models subject to certain limiting conditions. it is found that the complete set is described by 192 models, with only five possibilities for the hidden sector gauge group. It is argued that only four of the hidden sector gauge groups are viable for dynamical supersymmetry breaking, leaving only 175 promising models in the class. General features of the spectra of matter states in all 175 models are discussed. Twenty patterns of representations are found to occur. Accommodation of the Minimal Supersymmetric Standard Model (MSSM) spectrum is addressed. States beyond those contains in the MSSM and nonstandard hypercharge normalization are shown to be generic, though some models do allow for the usual hypercharge normalization found in SU(5) embeddings of the Standard Model gauge group. Only one of the twenty patterns of representations, comprising seven of the 175 models, is found to be …

Relationships between intrinsic mechanical hardness and atomic-scale properties are reviewed, Hardness scales closely and linearly with shear modulus for a given class of material (covalent, ionic or metallic). A two-parameter fit and a Peierls-stress model produce a more universal scaling relationship, but no model can explain differences in hardness between the transition metal carbides and nitrides. Calculations of ''ideal strength'' (defined by the limit of elastic stability of a perfect crystal) are proposed. The ideal shear strengths of fcc aluminum and copper are calculated using ab initio techniques and allowing for structural relaxation of all five strain components other than the imposed strain. The strengths of Al and Cu are similar (8-9% of the shear modulus), but the geometry of the relaxations in Al and Cu is very different. The relaxations are consistent with experimentally measured third-order elastic constants. The general thermodynamic conditions of elastic stability that set the upper limits of mechanical strength are derived. The conditions of stability are shown for cubic (hydrostatic), tetragonal (tensile) and monoclinic (shear) distortions of a cubic crystal. The implications of this stability analysis to first-principles calculations of ideal strength are discussed, and a method to detect instabilities orthogonal to the direction of …

The author performs image reconstruction for a novel Positron Emission Tomography camera that is optimized for breast cancer imaging. This work addresses for the first time, the problem of fully-3D, tomographic reconstruction using a septa-less, stationary, (i.e. no rotation or linear motion), and rectangular camera whose Field of View (FOV) encompasses the entire volume enclosed by detector modules capable of measuring Depth of Interaction (DOI) information. The camera is rectangular in shape in order to accommodate breasts of varying sizes while allowing for soft compression of the breast during the scan. This non-standard geometry of the camera exacerbates two problems: (a) radial elongation due to crystal penetration and (b) reconstructing images from irregularly sampled data. Packing considerations also give rise to regions in projection space that are not sampled which lead to missing information. The author presents new Fourier Methods based image reconstruction algorithms that incorporate DOI information and accommodate the irregular sampling of the camera in a consistent manner by defining lines of responses (LORs) between the measured interaction points instead of rebinning the events into predefined crystal face LORs which is the only other method to handle DOI information proposed thus far. The new procedures maximize the use …

An implicit version of the Smooth Particle Hydrodynamic (SPH) code SPHINX has been written and is working. In conjunction with the SPHINX code the new implicit code models fluids and solids under a wide range of conditions. SPH codes are Lagrangian, meshless and use particles to model the fluids and solids. The implicit code makes use of the Krylov iterative techniques for solving large linear-systems and a Newton-Raphson method for non-linear corrections. It uses numerical derivatives to construct the Jacobian matrix. It uses sparse techniques to save on memory storage and to reduce the amount of computation. It is believed that this is the first implicit SPH code to use Newton-Krylov techniques, and is also the first implicit SPH code to model solids. A description of SPH and the techniques used in the implicit code are presented. Then, the results of a number of tests cases are discussed, which include a shock tube problem, a Rayleigh-Taylor problem, a breaking dam problem, and a single jet of gas problem. The results are shown to be in very good agreement with analytic solutions, experimental results, and the explicit SPHINX code. In the case of the single jet of gas case it has …

The following work presents a preliminary measurement of the inclusive jet cross section for jet transverse momenta from 61 to 620 GeV in the rapidity range 0.1 < |Y| < 0.7. The result is based on 218 pb{sup -1} of data collected by the CDF detector at the Fermi National Accelerator Lab. The data are consistent with NLO pQCD predictions based on the CTEQ6.1 parton distribution functions.

We have studied the properties of a low emittance electron beam produced by laser pulses incident onto an rf gun photocathode. The experiments were carried out at the A0 photoinjector at Fermilab. Such beam studies are necessary for fixing the design of new Linear Colliders as well as for the development of Free Electron Lasers. An overview of the A0 photoinjector is given in Chapter 1. In Chapter 2 we describe the A0 photoinjector laser system. A stable laser system is imperative for reliable photoinjector operation. After the recent upgrade, we have been able to reach a new level of stability in the pulse-to-pulse fluctuations of the pulse amplitude, and of the temporal and transverse profiles. In Chapter 3 we present a study of transverse emittance versus the shape of the photo-cathode drive-laser pulse. For that purpose a special temporal profile laser shaping device called a pulse-stacker was developed. In Chapter 4 we discuss longitudinal beam dynamics studies using a two macro-particle bunch; this technique is helpful in analyzing pulse compression in the magnetic chicane, as well as velocity bunching effects in the rf-gun and the 9-cell accelerating cavity. In Chapter 5 we introduce a proposal for laser acceleration of …

An accelerator-based experiment was performed using the CEBAF accelerator of the Thomas Jefferson National Accelerator Facility to investigate a predicted sensitivity of the beam polarization to the vertical betatron orbit in the recirculation arcs. This is the first measurement of any such effect at CEBAF, and provides information about the polarized beam delivery performance of the accelerator. A brief description of the accelerator is given, followed by the experimental methods used and the relevant issues involved in measuring a small ({approximately} 10{sup {minus}2}) change in the beam polarization. Results of measurements of the polarization sensitivity parameters and the machine energy by polarization transport techniques are presented. The parameters were obtained by measurement of the strength of the effect as a function of orbit amplitude and spin orientation, to confirm the predicted coupling between the spin orientation and the quadrupole fields in the beam transport system. This experiment included characterizing the injector spin manipulation system and 5 MeV Mott polarimeter, modeling of the polarization transport of the accelerator, installation of magnets to create a modulated orbit perturbation in a single recirculation arc, and detailed studies of the Hall C Moeller polarimeter.

In this thesis the first measurement of {sigma}(p{bar p}) {yields} Z{sup 0} {yields} {tau}{bar {tau}} with the D0 detector at the Tevatron is presented. The tau pair candidates are recorded by the D0 detector using p{bar p} interactions at a center-of-mass energy of 1.96 TeV. Events in which one tau decays into a muon and the other tau final state is hadronic with one charged particle are selected for this analysis. The selection criteria for the hadronic tau decay are based on the tau final state, hence for two channels of one-prong taus: single charged pion ({tau}{sub {pi}}) and rho decays ({tau}{sub {rho}}). The selection is based on simple cuts on a number of discriminating variables and the cut values have been optimized for the best cross section measurement. Of hadronic tau candidates that have been reconstructed as {tau}{sub {pi}} candidates, 0.801 {+-} 0.017 {+-} 0.066 pass the selection cut; in the case of {tau}{sub {rho}} taus, the selection efficiency is 0.676 {+-} 0.009 {+-} 0.009. Of all QCD jets that are reconstructed as hadronic tau candidates, 0.0093 {+-} 0.0002 pass the {tau}{sub {pi}} selection cuts and 0.0122 {+-} 0.0002 the {tau}{sub {rho}} cuts. The cross section has been measured …

The analysis presented in this thesis focuses on kinematic distributions in the t{bar t} system and studies in detail selected differential cross sections of top quarks as well as the reconstructed t{bar t} pair, namely the top quark transverse momentum and the t{bar t} system mass. The structure of the thesis is organized as follows: first the Standard Model of the particle physics is briefly introduced in Chapter 1, with relevant aspects of electroweak and strong interactions discussed. The physics of the top quark and its properties are then outlined in Chapter 2, together with the motivation for measuring the transverse top quark momentum and other kinematic-related variables of the t{bar t} system. The concepts of present-day high energy physics collider experiments and the explicit example of Fermilab Tevatron collider and the D0 detector in Chapters 3 and 4 are followed by the description of basic detector-level objects, i.e. tracks, leptons and jets, in Chapter 5; their identification and calibration following in next chapter with the emphasis on the jet energy scale in Chapter 6 and jet identification at the D0. The analysis itself is outlined in Chapter 7 and is structured so that first the data and simulation samples …

This Ph.D. thesis presents the measurement of inclusive jet cross sections in Z/{gamma}* {yields} e{sup +}e{sup -} events using 1.7 fb{sup -1} of data collected by the upgraded CDF detector during the Run II of the Tevatron. The Midpoint cone algorithm is used to search for jets in the events after identifying the presence of a Z/{gamma}* boson through the reconstruction of its decay products. The measurements are compared to next-to-LO (NLO) pQCD predictions for events with one and two jets in the final state. The perturbative predictions are corrected for the contributions of non-perturbative processes, like the underlying event and the fragmentation of the partons into jets of hadrons. These processes are not described by perturbation theory and must be estimated from phenomenological models. In this thesis, a number of measurements are performed to test different models of underlying event and hadronization implemented in LO plus parton shower Monte Carlo generator programs. Chapter 2 is devoted to the description of the theory of strong interactions and jet phenomenology at hadron colliders. Chapter 3 contains the description of the Tevatron collider and the CDF detector. The analysis is described in detail in Chapter 4. Chapter 5 shows the measurement of …

We have measured the fraction of longitudinally polarized W bosons produced top-quark decays. The result of the analysis in single-lepton t{bar t} events is fully consistent with the Standard Model expectation. The 2{sigma} discrepancy in the dilepton analysis is suggestive of new phenomena. However, given the significance of the discrepancy, any claim of new physics based on this analysis is highly speculative. It is worth noting that another analysis of the kinematic properties of these data finds a similar discrepancy [63]. It will be interesting to see if this discrepancy persists as more data are collected during run II of the Tevatron. In order to make a stronger statement about the nature of the tWb coupling with this method, larger statistics are required. However alternative methods, particularly the matrix-element method developed at D0 [36, 35], should be especially powerful, even with limited statistics.

In this thesis we present the measurement of the inclusive isolated prompt photon cross section with a total integrated luminosity of 2.5 fb{sup -1} of data collected with the CDF Run II detector at the Fermilab Tevatron Collider. The prompt photon cross section is a classic measurement to test perturbative QCD (pQCD) with potential to provide information on the parton distribution function (PDF), and sensitive to the presence of new physics at large photon transverse momentum. Prompt photons also constitute an irreducible background for important searches such as H {yields} {gamma}{gamma}, or SUSY and extra-dimensions with energetic photons in the final state. The Tevatron at Fermilab (Batavia, U.S.A.) is currently the hadron collider that operates at the highest energies in the world. It collides protons and antiprotons with a center-of-mass energy of 1.96 TeV. The CDF and the D0 experiments are located in two of its four interaction regions. In Run I at the Tevatron, the direct photon production cross section was measured by both CDF and DO, and first results in Run II have been presented by the DO Collaboration based on 380 pb{sup -1}. Both Run I and Run II results show agreement with the theoretical predictions except …

Discovery of the top quark in 1995 at the Fermilab Tevatron collider concluded a long search following the 1977 discovery of bottom (b) quark [1] and represents another triumph of the Standard Model (SM) of elementary particles. Top quark is one of the fundamental fermions in the Standard Model of electroweak interactions and is the weak-isospin partner of the bottom quark. A precise measurement of top pair production cross-section would be a test of Quantum Chromodynamics (QCD) prediction. Presently, Tevatron is the world's highest energy collider where protons (p) and anti-protons ({anti p}) collide at a centre of mass energy (ps) of 1.96 TeV. At Tevatron top (t) and anti-top ({anti t}) quarks are predominantly pair produced through strong interactions--quark annihilation ({approx_equal} 85%) and gluon fusion ({approx_equal} 15%). Due to the large mass of top quark, t or {anti t} decays ({approx} 10{sup -25} sec) before hadronization and in SM framework, it decays to a W boson and a b quark with {approx} 100% branching ratio (BR). The subsequent decay of W boson determines the major signatures of t{anti t} decay. If both W bosons (coming from t and {anti t} decays) decay into leptons (viz., ev{sub e}, {mu}{nu}{sub {mu}} …

This thesis presents the first measurement of the differential production cross section of a heavy flavor (bottom or charm) jet and direct photon at the Fermilab Tevatron. These measurements were performed using data recorded with the D0 detector from proton-antiproton collisions at a center of mass energy of {radical}s = 1.96 TeV. These results probe a kinematic range for the photon transverse momentum of 30 < p{sub T}{sup {gamma}} < 150 GeV and rapidity of |y{sup {gamma}}| < 1.0 and for jet transverse momentum p{sub T}{sup jet} > 15 GeV and rapidity of |y{sup jet}| < 0.8. These results are compared to next-to-leading-order theoretical calculations.

Many scientific and industrial applications call for quantum-efficient high-energy-resolution microcalorimeters for the measurement of x rays. The applications driving the development of these detectors involve the measurement of faint sources of x rays in which few photons reach the detector. Interesting astrophysical applications for these microcalorimeters include the measurement of composition and temperatures of stellar atmospheres and diffuse interstellar plasmas. Other applications of microcalorimeter technology include x-ray fluorescence (XRF) measurements of industrial or scientific samples. We are attempting to develop microcalorimeters with energy resolutions of several eV because many sources (such as celestial plasmas) contain combinations of elements producing emission lines spaced only a few eV apart. Our microcalorimeters consist of a metal-film absorber (250 {micro}m x 250{micro}m x 3 {micro}m of copper) coupled to a superconducting transition-edge-sensor (TES) thermometer. This microcalorimeter demonstrated an energy resolution of 42 eV (FWHM) at 6 keV, excellent linearity, and showed no evidence of position dependent response. The response of our microcalorimeters depends both on the temperature of the microcalorimeter and on the electrical current conducted through the TES thermometer. We present a microcalorimeter model that extends previous microcalorimeter theory to include additional current dependent effects. The model makes predictions about the effects of …

Since the X(3872) was discovered by the Belle Collaboration in August 2003, it's interpretation through the Standard Model has been difficult. Many possible interpretations have been proposed due to its close proximity to the D{bar D}* mass threshold, ranging from a new state in the charmonium spectrum to a 4-quark state to a weakly bound meson molecule. Probing the X(3872) is also made difficult due to low statistical samples at e{sup +}e{sup -} colliders and large combinatoric backgrounds at hadron colliders such as the Tevatron. This paper presented the results of probes of this state performed at the D0 detector.

The past decade is one of the most exciting period in the history of physics and astronomy. The discovery of cosmic acceleration dramatically changed our understanding about the evolution and constituents of the Universe. To accommodate the new acceleration phase into our well established Big Bang cosmological scenario under the frame work of General Relativity, there must exist a very special substance that has negative pressure and make up about 73% of the total energy density in our Universe. It is called Dark Energy. For the first time people realized that the vast majority of our Universe is made of things that are totally different from the things we are made of. Therefore, one of the major endeavors in physics and astronomy in the coming years is trying to understand, if we can, the nature of dark energy. Understanding dark energy cannot be achieved from pure logic. We need empirical evidence to finally determine about what is dark energy. The better we can constrain the energy density and evolution of the dark energy, the closer we will get to the answer. There are many ways to constrain the energy density and evolution of dark energy, each of which leads to …

The goal of Jefferson Lab experiment E01-004 (F?-2) was the measurement of the longitudinal and transverse cross sections via pion electroproduction from hydrogen and deuterium for the purpose of extracting the charged pion form factor using pole dominance. The data were taken at two values of Q2 (1.60 and 2.45 GeV/c)2. In order to attain full coverage in R?, charged pions were detected in parallel kinematics (along the direction of momentum transfer, q), and at ±3 degrees off the direction of momentum transfer. For each Q2 data were taken for two values of the virtual photon polarization, ?, respectively. All data were taken at a fixed center of mass energy, W=2.22 GeV. The longitudinal and transverse pieces of the cross section were separated using the Rosenbluth separation method.

We present a measurement of the mass of the top quark using data from proton-antiproton collisions recorded at the CDF experiment in Run II of the Fermilab Tevatron. Events are selected from the single lepton plus jets final state (t{bar t} {yields} W{sup +}bW{sup -}{bar b} {yields} {ell}{nu}bq{bar q}{prime}{bar b}). The top quark mass is extracted using a calculation of the probability density for a t{bar t} final state to resemble a data event. This probability density is a function of both top quark mass and energy scale of calorimeter jets, constrained in situ with the hadronic W boson mass. Using 167 events observed in 955 pb{sup -1} integrated luminosity, we achieve the single most precise measurement of top quark mass to date of 170.8 {+-} 2.2 (stat.) {+-} 1.4 (syst.) GeV/c{sup 2}, where the quoted statistical uncertainty includes uncertainty from the determination of the jet energy scale.