Differential effects of soil conservation practices on arthropods and crop yields (open access)

Differential effects of soil conservation practices on arthropods and crop yields

Article describes how many agricultural management tactics, such as reduced tillage, aim to promote biodiversity and ecosystem services. Authors assessed how soil tillage and landscape context affected arthropod biodiversity and crop yield in canola crop fields.
Date: October 31, 2023
Creator: Lichtenberg, Elinor M.; Milosavljević, Ivan; Campbell, Alistair J. & Crowder, David W.
System: The UNT Digital Library
The refractive index of a single atom experienced by a single photon (open access)

The refractive index of a single atom experienced by a single photon

Article describes how the refractive index of a system is often viewed as the collective response of a medium to an electromagnetic field. By studying the propagation of a single photon interacting with a two-level atom, the authors examine the dispersion behavior, calculate the phase and group velocity of the photon wave packet, and further analyze the dispersion experienced by the photon.
Date: October 25, 2023
Creator: Rostovtsev, Yuri V.; Emerick, Jacob & Patnaik, Anil K.
System: The UNT Digital Library
Dominant Role of Hole Transport Pathway in Achieving Record High Photoconductivity in Two-Dimensional Metal-Organic Frameworks (open access)

Dominant Role of Hole Transport Pathway in Achieving Record High Photoconductivity in Two-Dimensional Metal-Organic Frameworks

Article describes how metal-organic frameworks with mobile charges have attracted significant attention due to their potential application in photoelectric devices, chemical resistance sensors, and catalysis. The authors report the mechanisms of photoinduced charge transport and electron dynamics in the conductive 2D M−HHTP MOFs and their correlation with photoconductivity using the combination of time-resolved terahertz spectroscopy, optical transient absorption spectroscopy, X-ray transient absorption spectroscopy, and density functional theory calculations.
Date: October 23, 2023
Creator: Wang, Denan; Ostresh, Sarah; Streater, Daniel; He, Peilei; Nyakuchena, James; Ma, Qiushi et al.
System: The UNT Digital Library
The formation channels of multiphase gas in nearby early-type galaxies (open access)

The formation channels of multiphase gas in nearby early-type galaxies

Article describes how the processes responsible for the assembly of cold and warm gas in early-type galaxies (ETGs) are not well understood. The authors report on the multiwavelength properties of 15 non-central, nearby ETGs primary through Multi-Unit Spectroscopic Explorer (MUSE) and Chandra X-ray observations, to address the origin of their multiphase gas.
Date: October 21, 2023
Creator: Eskenasy, Ryan; Olivares, Valeria; Su, Yuanyuan & Li, Yuan
System: The UNT Digital Library
Estimating Hausdorff measure for Denjoy maps (open access)

Estimating Hausdorff measure for Denjoy maps

Article describes how the authors plant to deal with orientation preserving homeomorphisms and, more specifically, diffeomorphisms of the unit circle S1. By employing the recurrence method worked out in Pawelec the authors provide effective lower estimates of the proper-dimensional Hausdorff measure of minimal sets of circle homeomorphisms that are not conjugate to any rotation.
Date: October 20, 2023
Creator: Pawelec, Łukasz & Urbański, Mariusz
System: The UNT Digital Library
Neuron Navigator 1 (Nav1) regulates the response to cocaine in mice (open access)

Neuron Navigator 1 (Nav1) regulates the response to cocaine in mice

Article describes how genetic variation accounts for much of the risk for developing a substance use disorder, but the underlying genetic factors and their genetic effector mechanisms are mostly unknown. To test their genetic hypothesis, the authors generated and characterized Nav1 knockout mice.
Date: October 18, 2023
Creator: Bagley, Jared R.; Tan, Yalun; Zhu, Wan; Cheng, Zhuanfen; Takeda, Saori; Fang, Zhouqing et al.
System: The UNT Digital Library
ARKENSTONE – I. A novel method for robustly capturing high specific energy outflows in cosmological simulations (open access)

ARKENSTONE – I. A novel method for robustly capturing high specific energy outflows in cosmological simulations

Article describes how ARKENSTONE is a new model for multiphase, stellar feedback-driven galactic winds designed for inclusion in coarse resolution cosmological simulations. In this first paper of a series, the authors describe the features that allow ARKENSTONE to properly treat high specific energy wind components and demonstrate them using idealized non-cosmological simulations of a galaxy with a realistic circumgalactic medium (CGM) using the AREPO code.
Date: October 17, 2023
Creator: Smith, Matthew C.; Fielding, Drummond B.; Bryan, Greg L.; Kim, Chang-Goo; Ostriker, Eve C.; Somerville, Rachel S. et al.
System: The UNT Digital Library
Time-resolved systems analysis of the induction of high photosynthetic capacity in Arabidopsis during acclimation to high light (open access)

Time-resolved systems analysis of the induction of high photosynthetic capacity in Arabidopsis during acclimation to high light

Article describes how induction of high photosynthetic capacity is a key acclimation response to high light for many herbaceous dicot plants. Here, a systems biology approach was utilized to characterize the induction of high photosynthetic capacity in strongly and weakly acclimating Arabidopsis thaliana accessions.
Date: October 17, 2023
Creator: Baker, Christopher R.; Cocuron, Jean-Christophe; Alonso, Ana Paula & Niyogi, Krishna K.
System: The UNT Digital Library
Improving the Selectivity of the C-C Coupled Product Electrosynthesis by Using Molecularly Imprinted Polymer-An Enhanced Route from Phenol to Biphenol (open access)

Improving the Selectivity of the C-C Coupled Product Electrosynthesis by Using Molecularly Imprinted Polymer-An Enhanced Route from Phenol to Biphenol

Authors of the article describe how they developed a procedure for selective 2,4-dimethylphenol, DMPh, direct electro-oxidation to 3,3' ,5,5'-tetramethyl-2,2'-biphenol, TMBh, a C-C coupled product. The authors claim that the procedure is reasonably selective towards TMBh without requiring harmful additives or elevated temperatures.
Date: October 12, 2023
Creator: Sudagar, Alcina Johnson; Shao, Shuai; Żołek, Teresa; Maciejewska, Dorota; Asztemborska, Monika; Cieplak, Maciej et al.
System: The UNT Digital Library
Biophotons: New Experimental Data and Analysis (open access)

Biophotons: New Experimental Data and Analysis

Article describes how biophotons are an ultra-weak emission of photons in the visible energy range from living matter. The authors study the emission from germinating seeds using an experimental technique designed to detect light of extremely small intensity.
Date: October 10, 2023
Creator: Benfatto, Maurizio; Pace, Elisabetta; Davoli, Ivan; Francini, Roberto; Matteis, Fabio De; Scordo, Alessandro et al.
System: The UNT Digital Library
Enhanced Corrosion Resistance and Surface Wettability of PVDF/ZnO and PVDF/TiO2 Composite Coatings: A Comparative Study (open access)

Enhanced Corrosion Resistance and Surface Wettability of PVDF/ZnO and PVDF/TiO2 Composite Coatings: A Comparative Study

Article describes how this study aims to enhance the practical performance of PVDF/ZnO and PVDF/TiO2 composite coatings known for their distinctive properties. The coatings, applied through spray coating with PVDF and ZnO or TiO2 nanoparticles on glass, steel, and aluminum substrates, underwent a comprehensive evaluation.
Date: October 4, 2023
Creator: Mohamed, Adel M. A.; Alateyah, Abdulrahman I.; Hasan, Hosam; Matli, Penchal Reddy; El-Sayed Seleman, Mohamed M.; Ahmed, Essam et al.
System: The UNT Digital Library
Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data (open access)

Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data

Article describes how taxonomic profiling of ancient metagenomic samples is challenging due to the accumulation of specific damage patterns on DNA over time. The authors performed a comprehensive evaluation on simulated metagenomes representing human dental calculus microbiome, with the level of DNA damage successively raised to mimic modern to ancient metagenomes.
Date: October 2, 2023
Creator: Pusadkar, Vaidehi & Azad, Rajeev K.
System: The UNT Digital Library
Identification of Novel Antimicrobial Resistance Genes Using Machine Learning, Homology Modeling, and Molecular Docking (open access)

Identification of Novel Antimicrobial Resistance Genes Using Machine Learning, Homology Modeling, and Molecular Docking

Article claims antimicrobial resistance (AMR) threatens the healthcare system worldwide with the rise of emerging drug resistant infectious agents. To infer novel resistance genes, we used complete gene sets of several bacterial strains known to be susceptible or resistant to specific drugs and associated phenotypic information within a machine learning framework that enabled prioritizing genes potentially involved in resistance.
Date: October 23, 2022
Creator: Sunuwar, Janak & Azad, Rajeev K.
System: The UNT Digital Library
MetaLP: An integrative linear programming method for protein inference in metaproteomics (open access)

MetaLP: An integrative linear programming method for protein inference in metaproteomics

Authors of the article discuss how MetaLP was developed here for protein inference in metaproteomics using an integrative linear programming method. Authors claim that MetaLP could substantially improve protein inference for complex metaproteomes by incorporating taxonomic abundance information in a linear programming model.
Date: October 21, 2022
Creator: Feng, Shichao; Ji, Hong-Long; Wang, Huan; Zhang, Bailu; Sterzenbach, Ryan; Pan, Chongle et al.
System: The UNT Digital Library
Recurrent urinary tract infection and estrogen shape the taxonomic ecology and function of the postmenopausal urogenital microbiome (open access)

Recurrent urinary tract infection and estrogen shape the taxonomic ecology and function of the postmenopausal urogenital microbiome

Article describes how postmenopausal women are severely affected by recurrent urinary tract infection (rUTI). The authors perform shotgun metagenomics and advanced culture on urine from a controlled cohort of postmenopausal women to identify urogenital microbiome compositional and function changes linked to rUTI susceptibility.
Date: October 18, 2022
Creator: Neugent, Michael D.; Kumar, Ashwani; Hulyalkar, Neha V.; Lutz, Kevin C.; Nguyen, Vivian H.; Fuentes, Jorge L. et al.
System: The UNT Digital Library
Sustainable nutrition: a spatially explicit modeling approach for urban land use planning (open access)

Sustainable nutrition: a spatially explicit modeling approach for urban land use planning

Article describes how rapid urbanization has influenced the transformation of local and global food systems, altering the availability, access to, and distribution of healthy food. Micronutrient deficiency and hunger have been exacerbated worldwide. The author's research proposes a simulation strategy to evaluate the impact of agricultural land use and crop choices on nutritional production in rapidly growing urban areas.
Date: October 14, 2022
Creator: Torres, Angélica Torres; Tiwari, Chetan & Atkinson, Samuel F.
System: The UNT Digital Library
Unusual Mathematical Approaches Untangle Nervous Dynamics (open access)

Unusual Mathematical Approaches Untangle Nervous Dynamics

Article reports that the massive amount of available neurodata suggests the existence of a mathematical backbone underlying neuronal oscillatory activities. The authors assert that the Monge’s theorem might contribute to our visual ability of depth perception and the brain connectome can be tackled in terms of tunnelling nanotubes.
Date: October 14, 2022
Creator: Tozzi, Arturo & Mariniello, Lucio
System: The UNT Digital Library
Optical in-situ measurements and modeling of post-flame sulfation of NaOH(g) and NaCl(g) (open access)

Optical in-situ measurements and modeling of post-flame sulfation of NaOH(g) and NaCl(g)

Article describes post-flame sulfation of gaseous sodium hydroxide (NaOH) and sodium chloride (NaCl) was investigated with optical in situ measurements at 850 to 1475°C. The combined experimental data, chemical equilibrium calculations and kinetic modeling of the present study support that sulfation of alkali species can occur in the gas phase through homogeneous reactions.
Date: October 13, 2022
Creator: Schmid, Daniel; Weng, Wubin; Li, Shen; Karlström, Oskar; Hupa, Mikko; Li, Zhongshan et al.
System: The UNT Digital Library
Tuning the decay of sound in a viscous metamaterial (open access)

Tuning the decay of sound in a viscous metamaterial

Authors of the article use analytical results for viscous dissipation in phononic crystals to calculate the decay coefficient of a sound wave propagating at low frequencies through a two-dimensional phononic crystal with a viscous fluid background. They claim that the decay coefficient exhibits dependence on the direction of propagation; that is, a homogenized phononic crystal behaves like an anisotropic viscous fluid.
Date: October 10, 2022
Creator: Ibarias, M.; Doporto, J.; Krokhin, Arkadii A. & Arriaga, J.
System: The UNT Digital Library
A covalently linked nickel(II) porphyrin–ruthenium(II) tris(bipyridyl) dyad for efficient photocatalytic water oxidation (open access)

A covalently linked nickel(II) porphyrin–ruthenium(II) tris(bipyridyl) dyad for efficient photocatalytic water oxidation

Article describes how photocatalytic water splitting into H2 and O2 has attracted significant scientific interest for solar energy conversion applications during the last two decades. Authors of the article further elaborate that One of the half-reactions of this process, water oxidation, is known to be the key step in natural and artificial photosynthesis to convert and store solar energy.
Date: October 5, 2022
Creator: Nikoloudakis, Emmanouil; Alsaleh, Ajyal Z.; Charalambidis, Georgios; Coutsolelos, Athanassios G. & D'Souza, Francis
System: The UNT Digital Library
Corrosion Inhibition Effect of Pyridine-2-Thiol for Brass in An Acidic Environment (open access)

Corrosion Inhibition Effect of Pyridine-2-Thiol for Brass in An Acidic Environment

Article states that the inhibitive performance of pyridine-2-thiol added to a corrosive solution was investigated for brass using potentiodynamic polarization, electrochemical impedance spectroscopy, and X-ray photoelectron spectroscopy. Scanning electron microscopy showed defect free and less scale formation for the inhibited surface but the bare brass surface had larger amounts of scale formation. X-ray photoelectron spectroscopy and UV-vis spectroscopy was used to investigate surface chemical composition and inhibitor structural changes over time.
Date: October 3, 2022
Creator: Karunarathne, Darshan Jayasinghe; Aminifazl, Alireza; Abel, Tori E.; Quepons, Karen L. & Golden, Teresa Diane, 1963-
System: The UNT Digital Library
Crowdsourcing biocuration: the Community Assessment of Community 1 Annotation with Ontologies (CACAO) (open access)

Crowdsourcing biocuration: the Community Assessment of Community 1 Annotation with Ontologies (CACAO)

Article describing an approach to expand biocuration through crowdsourcing with undergraduates in the community-oriented wiki framework for GO annotation called the Gene Ontology Normal Usage Tracking System (GONUTS). This multiplies the number of high-quality annotations in international databases, enriches the coverage of the literature on normal gene function, and pushes the field in new directions.
Date: October 28, 2021
Creator: Ramsey, Jolene; McIntosh, Brenley; Renfro, Daniel; Aleksander, Susan A.; LaBonte, Sandra; Ross, Curtis et al.
System: The UNT Digital Library
Sub-Diffraction-Limit Imaging System with two Interfacing Hyperbolic Metamaterials (open access)

Sub-Diffraction-Limit Imaging System with two Interfacing Hyperbolic Metamaterials

Article demonstrating that a system of two interfacing hyperbolic metamaterials may be used for direct subwavelength imaging in the visible range.
Date: October 27, 2021
Creator: Bronnikov, Kirill; Arriaga, J.; Krokhin, Arkadii A. & Drachev, Vladimir P.
System: The UNT Digital Library
Beyond the Chicken: Alternative Avian Models for Developmental Physiological Research (open access)

Beyond the Chicken: Alternative Avian Models for Developmental Physiological Research

This article is a review examining the characteristics that make an animal model attractive for developmental research and explores opportunities presented by the embryo to adult continuum of alternative bird models including quail, ratites, songbirds, birds of prey, and corvids.
Date: October 21, 2021
Creator: Flores-Santin, Josele & Burggren, Warren W.
System: The UNT Digital Library