Complexity Synchronization of Organ Networks (open access)

Complexity Synchronization of Organ Networks

Article describes how the transdisciplinary nature of science as a whole became evident as the necessity for the complex nature of phenomena to explain social and life science, along with the physical sciences, blossomed into complexity theory and most recently into complexitysynchronization. The authors use the scaling of empirical datasets from the brain, cardiovascular and respiratory networks to support the hypothesis that complexity synchronization occurs between scaling indices or equivalently with the matching of the time dependencies of the networks' multifractal dimensions.
Date: September 28, 2023
Creator: West, Bruce J.; Grigolini, Paolo; Kerick, Scott E.; Franaszczuk, Piotr J. & Mahmoodi, Korosh
System: The UNT Digital Library
Role of microRNAs and their downstream target transcription factors in zebrafish thrombopoiesis (open access)

Role of microRNAs and their downstream target transcription factors in zebrafish thrombopoiesis

Article describes how previous studies have shown that human platelets and megakaryocytes carry microRNAs suggesting their role in platelet function and megakaryocyte development. In their laboratory, the authors identified 15 microRNAs in thrombocytes using single-cell RNA sequencing.
Date: September 26, 2023
Creator: Qaryoute, Ayah Al; Fallatah, Weam; Dhinoja, Sanchi; Raman, Revathi & Jagadeeswaran, Pudur
System: The UNT Digital Library
Dry blood spot samples to monitor immune-associated mRNA expression in intervention studies: Impact of Baker's yeast beta glucan (open access)

Dry blood spot samples to monitor immune-associated mRNA expression in intervention studies: Impact of Baker's yeast beta glucan

Article describes how monitoring immunological response to physical stressors in a field setting is challenging because existing methods require a laboratory visit and traditional blood collection via venipuncture. The purpose of this study was to determine if our optimized dry blood spot (DBS) methodology yields sufficient total RNA to quantify the effect of Baker's Yeast Beta Glucan supplementation on post-exercise mRNA expression.
Date: September 22, 2023
Creator: McFarlin, Brian K.; Bridgeman, Elizabeth A.; Vingren, Jakob L. & Will, David W.
System: The UNT Digital Library
Silicon supply promotes differences in growth and C:N:P stoichiometry between bamboo and tree saplings (open access)

Silicon supply promotes differences in growth and C:N:P stoichiometry between bamboo and tree saplings

Article describes how silicon can be important for the growth, functioning, and stoichiometric regulation of nutrients for high-Si-accumulating bamboo. The authors demonstrated that silicon supply can decrease the ratio of C:Si in bamboo leaves and increase the ratio of N:P without altering nutrient status or the N:P ratio of tree spalings.
Date: September 21, 2023
Creator: Liu, Xiaoyu; Tang, Xinghao; Compson, Zacchaeus Greg; Huang, Dongmei; Zou, Guiwu; Luan, Fenggang et al.
System: The UNT Digital Library
Shared metadata for data-centric materials science (open access)

Shared metadata for data-centric materials science

Article describes how the expansive production of data in materials science, their widespread sharing and repurposing requires educated support and stewardship. The authors mainly focus on computational materials-science data and propose a constructive approach for the FAIRification of the (meta)data related to ground-state and excited-states calculations, potential-energy sampling, and generalized workflows.
Date: September 14, 2023
Creator: Ghiringhelli, Luca M.; Baldauf, Carsten; Bereau, Tristan; Brockhauser, Sandor; Carbogno, Chistian; Chamanara, Javad et al.
System: The UNT Digital Library
Gene-Level Analysis of Anthracycline-Induced Cardiomyopathy in Cancer Survivors (open access)

Gene-Level Analysis of Anthracycline-Induced Cardiomyopathy in Cancer Survivors

Article describes how anthracyclines are highly effective in treating cancer, despite increased risk of cardiomyopathy. This study examined gene-level associations with cardiomyopathy among cancer survivors using whole-exome sequencing data.
Date: September 12, 2023
Creator: Sharafeldin, Noha; Zhou, Liting; Singh, Purnima; Crossman, David K.; Wang, Xuexia; Hagerman, Lindsey et al.
System: The UNT Digital Library
Functional Carbon Capsules Supporting Ruthenium Nanoclusters for Efficient Electrocatalytic 99TcO4-/ReO4 Removal from Acidic and Alkaline Nuclear Wastes (open access)

Functional Carbon Capsules Supporting Ruthenium Nanoclusters for Efficient Electrocatalytic 99TcO4-/ReO4 Removal from Acidic and Alkaline Nuclear Wastes

Article describes how the selective removal of the β-emitting pertechnetate ion (99TcO4−) from nuclear waste streams is technically challenging. In this article, a practical approach is proposed for the selective removal of 99TcO4− (or its surrogate ReO4−) under extreme conditions of high acidity, alkalinity, ionic strength, and radiation field.
Date: September 10, 2023
Creator: Liu, Xiaolu; Xie, Yinghui; Li, Yang; Hao, Mengjie; Chen, Zhongshan; Yang, Hui et al.
System: The UNT Digital Library
Duals of Tirilman spaces have unique subsymmetric basic sequences (open access)

Duals of Tirilman spaces have unique subsymmetric basic sequences

Article describes how the Tirilman spaces were introduced by Casazza and Shura as variations of the spaces constructed by Tzafriri. We prove that all subsymmetric basic sequences in the dual space are equivalent to its canonical subsymmetic but not symmetric basis.
Date: September 5, 2023
Creator: Dilworth, Steven J.; Kutzarova, Denka; Sari, Bünyamin & Stankov, Svetozar
System: The UNT Digital Library
Nonlinear frequency analysis of porous Bi directional functionally graded beams utilizing reddy shear deformation theory (open access)

Nonlinear frequency analysis of porous Bi directional functionally graded beams utilizing reddy shear deformation theory

Article describes how the nonlinear frequency response of bi-directional functionally graded porous beams experienced range of various end conditions is investigated in this work. The findings are presented to aid in future research into the effects of various gradient indices, vibration amplitude ratios, porosity coefficients, shear and elastic substrate parameters, boundary conditions, and vibration frequencies on the bi-directional functionally graded beams.
Date: September 3, 2023
Creator: Forghani, Mohammadamin; Bazarganlari, Yousef; Zahedinejad, Parham & Kazemzadeh-Parsi, Mohammad Javad
System: The UNT Digital Library
Multi-omic characterization of bifunctional peroxidase 4-coumarate 3-hydroxylase knockdown in Brachypodium distachyon provides insights into lignin modification associated pleiotropic effects (open access)

Multi-omic characterization of bifunctional peroxidase 4-coumarate 3-hydroxylase knockdown in Brachypodium distachyon provides insights into lignin modification associated pleiotropic effects

Article discusses how a bifunctional peroxidase enzyme, 4-coumarate 3-hydroxylase (C3H/APX), provides a parallel route to the shikimate shunt pathway for the conversion of 4-coumarate to caffeate in the early steps of lignin biosynthesis. Here, a multi-omic approach was used to characterize molecular changes resulting from C3H/APX-KD associated lignin modification and negative growth phenotype in Brachypodium distachyon.
Date: September 28, 2022
Creator: Shrestha, Him K.; Fichman, Yosef; Engle, Nancy L.; Tschaplinski, Timothy J.; Mittler, Ron; Dixon, R. A. et al.
System: The UNT Digital Library
Urban edge trees: Urban form and meteorology drive elemental carbon deposition to canopies and soils (open access)

Urban edge trees: Urban form and meteorology drive elemental carbon deposition to canopies and soils

Article asserts that urban tree canopies are a significant sink for atmospheric elemental carbon (EC)--and air pollutant that is a powerful climate-forcing agent and threat to human health. The authors' findings indicate that complex configurations of roads, buildings, and vegetation produce “urban edge trees” that contribute to heterogeneous EC deposition patterns across urban systems, with implications for greenspace planning.
Date: September 27, 2022
Creator: Ponette-González, Alexandra G.; Chen, Dongmei; Elderbrock, Evan; Rindy, Jenna E.; Barrett, Tate E.; Luce, Brett W. et al.
System: The UNT Digital Library
Habitat amount or landscape configuration: Emerging HotSpot analysis reveals the importance of habitat amount for a grassland bird in South Dakota (open access)

Habitat amount or landscape configuration: Emerging HotSpot analysis reveals the importance of habitat amount for a grassland bird in South Dakota

The authors of the article used pheasants (Phasianus colchicus) across South Dakota, USA as a model species to identify environmental factors driving spatiotemporal variation in population productivity. They found that the amount of grassland at a local spatial scale was the primary factor influencing an area being a HotSpot.
Date: September 26, 2022
Creator: Harsh, Sprih; Lonsinger, Robert C. & Gregory, Andrew
System: The UNT Digital Library
Object-Oriented Canopy Gap Extraction from UAV Images Based on Edge Enhancement (open access)

Object-Oriented Canopy Gap Extraction from UAV Images Based on Edge Enhancement

Article describes the efficient and accurate identification of canopy gaps is the basis of forest ecosystem research, which is of great significance to further forest monitoring and management. One major limitation of the traditional methods of remote sensing to map canopy gaps is that they cannot finely extract the complex edges of canopy gaps in mountainous areas. The authors proposed an object-oriented classification method that integrates multi-source information.
Date: September 23, 2022
Creator: Xia, Jisheng; Wang, Yutong; Dong, Pinliang; He, Shijun; Zhao, Fei & Luan, Guize
System: The UNT Digital Library
Complete Genome Sequences of the Novel Cluster BP Phages Infecting Streptomyces sanglieri, AxeJC, Cumberbatch, Eastland, Eklok, HFrancette, Ignacio, Piccadilly, and Vondra (open access)

Complete Genome Sequences of the Novel Cluster BP Phages Infecting Streptomyces sanglieri, AxeJC, Cumberbatch, Eastland, Eklok, HFrancette, Ignacio, Piccadilly, and Vondra

Article describes the Streptomyces sanglieri bacteriophages AxeJC, Cumberbatch, Eastland,Eklok, HFrancette, Ignacio, Piccadilly, and Vondra form a novel actinobacteriophage cluster,BP. These siphoviruses have circularly permuted genomes with an average size of 37,700 bp and a GC content of 71%. Each genome contains approximately 58 protein-coding genes, with no tRNAs.
Date: September 14, 2022
Creator: Nath, Sreemoye; Sulaiman, Ahmad; Maneekul, Jindanuch; Bhuiyan, Swapan; Layton, Sonya R.; Menchaca, Carolina et al.
System: The UNT Digital Library
Metal-organic framework nanocrystal-derived hollow porousmaterials: Synthetic strategies and emerging applications (open access)

Metal-organic framework nanocrystal-derived hollow porousmaterials: Synthetic strategies and emerging applications

Article discusses how the fascinating, functional properties and applications of MOF-derived hollow porous materials primarily lie in their chemical composition, hollow character, and unique porous structure. The authors discuss a comprehensive overview of the synthetic strategies and emerging applications of hollow porous materials derived from MOF-based templates and/or precursors.
Date: September 13, 2022
Creator: Lui, Xiaolu; Verma, Guarav; Chen, Zhongshan; Hu, Baowei; Huang, Qifei; Yang, Hui et al.
System: The UNT Digital Library
Evaluation of pathways to the C-glycosyl isoflavone puerarin in roots of kudzu (Pueraria montana lobata) (open access)

Evaluation of pathways to the C-glycosyl isoflavone puerarin in roots of kudzu (Pueraria montana lobata)

Article describes how kudzu produces both O- and C-glycosylated isoflavones, with puerarin (C-glucosyl daidzein) as an important bioactive compound. The authors go on to explain how expression of recombinant UGTs in Escherichia coli and candidate C-glycosyltransferases in Medicago truncatula were used to explore substrate specificities, and gene silencing of UGT and key isoflavone biosynthetic genes in kudzu hairy roots employed to test hypotheses concerning the substrate(s) for C-glycosylation.
Date: September 2, 2022
Creator: Adolfo, Laci M.; Burks, David J.; Rao, Xiaolan; Alvarez-Hernandez, Anislay & Dixon, R. A.
System: The UNT Digital Library
Descriptive Complexity in Cantor Series (open access)

Descriptive Complexity in Cantor Series

Article discusses how a Cantor series expansion for a real number x with respect to a basic sequence Q=(q), where qi≥2, is a generalization of the base b expansion to an infinite sequence of bases. The authors show that for any basic sequence the set of distribution normal numbers is Π03-complete, and if Q is 1-divergent then the sets of normal and ratio normal numbers are Π03-complete.
Date: September 27, 2021
Creator: Airey, Dylan; Jackson, Steve & Mance, Bill
System: The UNT Digital Library
A Miniature Permanent Magnet Assembly with Localized and Uniform Field with an Application to Optical Pumping of Helium (open access)

A Miniature Permanent Magnet Assembly with Localized and Uniform Field with an Application to Optical Pumping of Helium

Article using simulations and experimental measurements to design, build, and test a compact and uniform magnetic field source and then apply it to the optical pumping of atomic helium.
Date: September 24, 2021
Creator: Cameron, Garnet; Cuevas, Jonathan; Pound, Jeffrey Jr. & Shiner, David
System: The UNT Digital Library
New reactions of diazene and related species for modelling combustion of amine fuels (open access)

New reactions of diazene and related species for modelling combustion of amine fuels

Article discusses how potential energy surfaces for reactions involving N2H2 isomers of diazene (diimide) have been explored using density functional theory, with energies based on coupled-cluster theory. A focus is on processes that create or consume these species, and isomerization between the E (trans) and Z (cis) forms of HNNH. This is the accepted manuscript version of the published article.
Date: September 24, 2021
Creator: Marshall, Paul; Rawling, George R. & Glarborg, Peter
System: The UNT Digital Library
Excited State Charge Separation in an Azobenzene-Bridged Perylenediimide Dimer – Effect of Photochemical Trans-Cis Isomerization (open access)

Excited State Charge Separation in an Azobenzene-Bridged Perylenediimide Dimer – Effect of Photochemical Trans-Cis Isomerization

Article demonstrating photoinduced charge transfer and separation events in a newly synthesized azobenzene-bridged perylenediimide-dimer (PDI-dimer). Results offer key insights on the role of the azobenzene bridge and the dimer geometry in governing the excited state charge transfer and separation in symmetrically linked PDI dimer.
Date: September 20, 2021
Creator: Zink-Lorre, Nathalie; Seetharaman, Sairaman; Gutiérrez-Moreno, David; Fernández-Lázaro, Fernando; Karr, Paul A. & D'Souza, Francis
System: The UNT Digital Library
Re-engineering Plant Phenylpropanoid Metabolism With the Aid of Synthetic Biosensors (open access)

Re-engineering Plant Phenylpropanoid Metabolism With the Aid of Synthetic Biosensors

Article that provides a brief overview of current research on synthetic biology and metabolic engineering approaches to control phenylpropanoid synthesis and phenylpropanoid-related biosensors, advocating for the use of biosensors and genetic circuits as a step forward in plant synthetic biology to develop autonomously-controlled phenylpropanoid-producing plant biofactories.
Date: September 16, 2021
Creator: Ferreira, Savio S. & Antunes, Mauricio S.
System: The UNT Digital Library
Simulation of the formation of antihydrogen via magnetobound positronium (open access)

Simulation of the formation of antihydrogen via magnetobound positronium

This article simulates Antihydrogen formation involving magnetobound positronium by computing classical trajectories.
Date: September 9, 2021
Creator: Aguirre, F. F. & Ordonez, Carlos A.
System: The UNT Digital Library
Event-Driven Deep Learning for Edge Intelligence (EDL-EI) (open access)

Event-Driven Deep Learning for Edge Intelligence (EDL-EI)

Article on deep-learning framework for edge intelligence EDL-EI (event-driven deep learning for edge intelligence). To verify the proposed framework, the authors include a case study of air-quality scenarios based for the most polluted cities in South Korea and China.
Date: September 8, 2021
Creator: Shah, Sayed Khushal; Tariq, Zeenat; Lee, Jeehwan & Lee, Yugyung
System: The UNT Digital Library
Developmental programming of DNA methylation and gene expression patterns is associated with extreme cardiovascular tolerance to anoxia in the common snapping turtle (open access)

Developmental programming of DNA methylation and gene expression patterns is associated with extreme cardiovascular tolerance to anoxia in the common snapping turtle

This article explores DNA methylation's role in the regulation of gene expression in reptiles. Results show that embryonic hypoxia programs DNA methylation and gene expression patterns and that these changes are associated with enhanced cardiac anoxia tolerance in snapping turtles later in life.
Date: September 6, 2021
Creator: Ruhr, Ilan; Bierstedt, Jacob; Rhen, Turk; Das, Debojyoti; Singh, Sunil Kumar; Miller, Solielle et al.
System: The UNT Digital Library