Badly approximable points on self-affine sponges and the lower Assouad dimension (open access)

Badly approximable points on self-affine sponges and the lower Assouad dimension

This article highlights a connection between Diophantine approximation and the lower Assouad dimension by using information about the latter to show that the Hausdorff dimension of the set of badly approximable points that lie in certain non-conformal fractals, known as self-affine sponges, is bounded below by the dynamical dimension of these fractals. The results, which are the first to advance beyond the conformal setting, encompass both the case of Sierpiński sponges/carpets (also known as Bedford–McMullen sponges/carpets) and the case of Barański carpets.
Date: June 20, 2017
Creator: Das, Tushar; Fishman, Lior; Simmons, David & Urbański, Mariusz
System: The UNT Digital Library
Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes (open access)

Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes

This article explores the use of an information-entropy-based gene clustering method for genomic island detection in MRSA.
Date: November 16, 2017
Creator: Jani, Mehul; Sengupta, Soham; Hu, Kelsey & Azad, Rajeev K.
System: The UNT Digital Library
Dense Locally Finite Subgroups of Automorphism Groups of Ultraextensive Spaces (open access)

Dense Locally Finite Subgroups of Automorphism Groups of Ultraextensive Spaces

Article verifying a conjecture of Vershik by showing that Hall’s universal countable locally finite group can be embedded as a dense subgroup in the isometry group of the Urysohn space and in the automorphism group of the random graph. It shows the same for all automorphism groups of known infinite ultraextensive spaces.
Date: August 18, 2021
Creator: Etedadialiabadi, Mahmood; Gao, Su; Le Maître, François & Melleray, Julien
System: The UNT Digital Library
Descriptive Complexity in Cantor Series (open access)

Descriptive Complexity in Cantor Series

Article discusses how a Cantor series expansion for a real number x with respect to a basic sequence Q=(q), where qi≥2, is a generalization of the base b expansion to an infinite sequence of bases. The authors show that for any basic sequence the set of distribution normal numbers is Π03-complete, and if Q is 1-divergent then the sets of normal and ratio normal numbers are Π03-complete.
Date: September 27, 2021
Creator: Airey, Dylan; Jackson, Steve & Mance, Bill
System: The UNT Digital Library
Duals of Tirilman spaces have unique subsymmetric basic sequences (open access)

Duals of Tirilman spaces have unique subsymmetric basic sequences

Article describes how the Tirilman spaces were introduced by Casazza and Shura as variations of the spaces constructed by Tzafriri. We prove that all subsymmetric basic sequences in the dual space are equivalent to its canonical subsymmetic but not symmetric basis.
Date: September 5, 2023
Creator: Dilworth, Steven J.; Kutzarova, Denka; Sari, Bünyamin & Stankov, Svetozar
System: The UNT Digital Library
Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains (open access)

Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains

This article predicts that marine-derived bacteria should inhibit Vibrio pathogens and may be a source of unique antibiotic compounds.
Date: March 10, 2017
Creator: Burks, David J.; Norris, Stephen; Kauffman, Kathryn M.; Joy, Abigail; Arevalo, Philip; Azad, Rajeev K. et al.
System: The UNT Digital Library
Estimating Hausdorff measure for Denjoy maps (open access)

Estimating Hausdorff measure for Denjoy maps

Article describes how the authors plant to deal with orientation preserving homeomorphisms and, more specifically, diffeomorphisms of the unit circle S1. By employing the recurrence method worked out in Pawelec the authors provide effective lower estimates of the proper-dimensional Hausdorff measure of minimal sets of circle homeomorphisms that are not conjugate to any rotation.
Date: October 20, 2023
Creator: Pawelec, Łukasz & Urbański, Mariusz
System: The UNT Digital Library
The exact consistency strength of the generic absoluteness for the universally Baire sets (open access)

The exact consistency strength of the generic absoluteness for the universally Baire sets

Article describes how a set of reals is universally Baire if all of its continuous preimages in topological spaces have the Baire property. The authors show that over some mild large cardinal theory, sealing is equiconsistent with LSA-over-uB.
Date: January 18, 2023
Creator: Sargsyan, Grigor & Trang, Nam
System: The UNT Digital Library
Existence and nonexistence of radial solutions for semilinear equations with bounded nonlinearities on exterior domains (open access)

Existence and nonexistence of radial solutions for semilinear equations with bounded nonlinearities on exterior domains

Article studies radial solutions of ∆u + K(r)f(u) = 0 on the exterior of the ball of radius R > 0 centered at the origin in ℝᶰ where f is odd with f < 0 on (0, β), f > 0 on (β, δ), f ≡ 0 for u > δ, and where the function K(r) is assumed to be positive and K(r) → 0 as r → ∞.
Date: December 1, 2020
Creator: Iaia, Joseph A.
System: The UNT Digital Library
Existence and Nonexistence of Solutions for Sublinear Equations on Exterior Domains (open access)

Existence and Nonexistence of Solutions for Sublinear Equations on Exterior Domains

This article studies radial solutions of Δu + K(r)ƒ(u) = 0 on the exterior of the ball of radius R > 0, BR, centered at the origin in ℝN with u = 0 on @BR where ƒ is odd with ƒ < 0 on (0; β), ƒ > 0 on (β;∞), f(u) ~ uᵖ with 0 < p < 1 for large u and K(r) ~ r⁻ᵅ for large r.
Date: September 13, 2017
Creator: Iaia, Joseph A.
System: The UNT Digital Library
Existence and Nonexistence of Solutions for Sublinear Problems With Prescribed Number of Zeros on Exterior Domains (open access)

Existence and Nonexistence of Solutions for Sublinear Problems With Prescribed Number of Zeros on Exterior Domains

This article proves the existence of radial solutions of Δu + K(r)ƒ(u) = 0 on the exterior of the ball, of radius R, centered at the origin in ℝᴺ such that limᵣ→∞u(r) = 0 if R > 0 is sufficiently small.
Date: May 16, 2017
Creator: Joshi, Janak
System: The UNT Digital Library
Existence of Infinitely Many Solutions for Singular Semilinear Problems on Exterior Domains (open access)

Existence of Infinitely Many Solutions for Singular Semilinear Problems on Exterior Domains

Article proving the existence of infinitely many radial solutions of ∆𝓊+𝐾(𝓇) ƒ (𝓊) = 0 on the exterior of the ball of radius R > 0, BR, centered at the origin in ℝᴺ with u = 0 on ∂BR and lim/r→∞ 𝓊(𝓇) = 0 where N > 2, f is odd with f < 0 on (0, β), f > 0 on (β, ∞), f is superlinear for large u, ƒ(𝓊) ∼ −1/(|𝓊|𝘲⁻¹𝓊) with 0 < q < 1 for small u, and 0 < 𝐾(𝓇) ≤ 𝐾₁/r∝ with 𝑁 + q(𝑁 − 2) < ∝ < 2(𝑁− 1) for large r.
Date: March 9, 2018
Creator: Iaia, Joseph A.
System: The UNT Digital Library
Existence of solutions for semilinear problems on exterior domains (open access)

Existence of solutions for semilinear problems on exterior domains

Article proves the existence of an infinite number of radial solutions to ∆u+K(r)f(u) = 0 on ℝᶰ such that limᵣ →∞ u(r) = 0 with prescribed number of zeros on the exterior of the ball of radius R > 0 where f is odd with f < 0 on (0, β), f > 0 on (β, ∞) with f superlinear for large u, and K(r) ∼ r ⁻ᵅ with α > 2(N − 1).
Date: April 15, 2020
Creator: Iaia, Joseph A.
System: The UNT Digital Library
Existence of Solutions for Sublinear Equations on Exterior Domains (open access)

Existence of Solutions for Sublinear Equations on Exterior Domains

This article proves the existence of an infinite number of radial solutions of Δu+K(r)ƒ(u) = 0, one with exactly n zeros for each nonnegative integer n on the exterior of the ball of radius R > 0, Bʀ, centered at the origin in ℝᴺ with u = 0 on ∂Bʀ and limᵣ→∞u(r) = 0 where N > 2, f is odd with ƒ < 0 on (0; β), ƒ > 0 on (β;∞), ƒ(u) ~ uᵖ with 0 < p < 1 for large u and K(r) ~ r-α with 0 < α < 2 for large r.
Date: October 10, 2017
Creator: Iaia, Joseph A.
System: The UNT Digital Library
Foias Numbers (open access)

Foias Numbers

This article identifies the principal features in Foias’ original proof and streamlines them into a general result. The result gives further evidence to the observation that the connection between the sequence with initial seed the Foias constant and the Prime Number Theorem must be fortuitous.
Date: December 30, 2018
Creator: Anghel, Nicolae
System: The UNT Digital Library
GAW20: methods and strategies for the new frontiers of epigenetics and pharmacogenomics (open access)

GAW20: methods and strategies for the new frontiers of epigenetics and pharmacogenomics

Article presents an overview of the data sets and the contributions analyzing data related to human lipid-related phenotypes, DNA methylation, and single-nucleotide markers in a study involving a pharmaceutical intervention.
Date: September 17, 2018
Creator: Tintle, Nathan L.; Fardo, David W.; de Andrade, Mariza; Aslibekyan, Stella; Bailey, Julia N.; Bermejo, Justo Lorenzo et al.
System: The UNT Digital Library
A gene based approach to test genetic association based on an optimally weighted combination of multiple traits (open access)

A gene based approach to test genetic association based on an optimally weighted combination of multiple traits

In this article, the authors propose a statistical method by Testing an Optimally Weighted Combination of Multiple traits (TOW-CM) to test the association between multiple traits and multiple variants in a genomic region (a gene or pathway). They investigate the performance of the proposed method through extensive simulation studies. Their simulation studies show that the proposed method has correct type I error rates and is either the most powerful test or comparable with the most powerful tests. Additionally, they illustrate the usefulness of TOW-CM based on a COPDGene study.
Date: August 9, 2019
Creator: Zhang, Jianjun; Sha, Qiuying; Liu, Guanfu & Wang, Xuexia
System: The UNT Digital Library
Gene-based association tests using GWAS summary statistics and incorporating eQTL (open access)

Gene-based association tests using GWAS summary statistics and incorporating eQTL

Article proposes a powerful and computationally efficient gene-based association test, called Overall. Using extended Simes procedure, Overall aggregates information from three types of traditional gene-based association tests and also incorporates expression quantitative trait locus (eQTL) information into a gene-based association test using GWAS summary statistics. The results show that this newly developed method can identify more significant genes than other methods.
Date: March 3, 2022
Creator: Cao, Xuwei; Wang, Xuexia; Zhang, Shuanglin & Sha, Qiuying
System: The UNT Digital Library
A gene based combination test using GWAS summary data (open access)

A gene based combination test using GWAS summary data

Article describes how gene-based association tests provide a useful alternative and complement to the usual single marker association tests, especially in genome-wide association studies (GWAS). The authors propose a test named OWC based on summary statistics from GWAS data.
Date: January 3, 2023
Creator: Zhang, Jianjun; Liang, Xiaoyu; Gonzales, Samantha; Liu, Jianguo; Gao, Xiaoyi Raymond & Wang, Xuexia
System: The UNT Digital Library
Gene-Level Analysis of Anthracycline-Induced Cardiomyopathy in Cancer Survivors (open access)

Gene-Level Analysis of Anthracycline-Induced Cardiomyopathy in Cancer Survivors

Article describes how anthracyclines are highly effective in treating cancer, despite increased risk of cardiomyopathy. This study examined gene-level associations with cardiomyopathy among cancer survivors using whole-exome sequencing data.
Date: September 12, 2023
Creator: Sharafeldin, Noha; Zhou, Liting; Singh, Purnima; Crossman, David K.; Wang, Xuexia; Hagerman, Lindsey et al.
System: The UNT Digital Library
The genome of jojoba (Simmondsia chinensis): A taxonomically isolated species that directs wax ester accumulation in its seeds (open access)

The genome of jojoba (Simmondsia chinensis): A taxonomically isolated species that directs wax ester accumulation in its seeds

Article describes the high-quality, 887-Mb genome of jojoba assembled into 26 chromosomes with 23,490 protein-coding genes.
Date: March 11, 2020
Creator: Sturtevant, Drew; Lu, Shaoping; Zhou, Zhi-Wei; Shen, Yin; Wang, Shuo; Song, Jia-Ming et al.
System: The UNT Digital Library
Haptoglobin Gene Expression and Anthracycline-Related Cardiomyopathy in Childhood Cancer Survivors: A COG-ALTE03N1 Report (open access)

Haptoglobin Gene Expression and Anthracycline-Related Cardiomyopathy in Childhood Cancer Survivors: A COG-ALTE03N1 Report

Article describes how anthracycline-related cardiomyopathy is a leading cause of premature death in childhood cancer survivors. The authors interrogated differentially expressed genes (DEGs) to identify genetic variants serving regulatory functions or genetic variants not easily identified when using genomewide array platforms.
Date: February 7, 2023
Creator: Singh, Purnima; Crossman, David K.; Zhou, Liting; Wang, Xuexia; Sharafeldin, Noha; Hageman, Lindsey et al.
System: The UNT Digital Library
Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light (open access)

Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light

Article reveal that the systemic transcriptomic response of plants to excess light stress is extensive in the context of systemic acquired acclimation and involves an early (2 min) and transient stage of transcript expression that includes thousands of genes.
Date: December 6, 2018
Creator: Zandalinas, Sara I.; Sengupta, Soham; Burks, David; Azad, Rajeev K. & Mittler, Ron
System: The UNT Digital Library
Infinitely Many Solutions for a Semilinear Problem on Exterior Domains With Nonlinear Boundary Condition (open access)

Infinitely Many Solutions for a Semilinear Problem on Exterior Domains With Nonlinear Boundary Condition

This article proves the existence of an infinite number of radial solutions to Δu + K(r)ƒ(u) = 0 with a nonlinear boundary condition on the exterior of the ball of radius R centered at the origin in ℝᴺ.
Date: May 8, 2018
Creator: Joshi, Janak & Iaia, Joseph A.
System: The UNT Digital Library