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Using Machine Learning to Predict Genes Underlying Differentiation of Multipartite and Unipartite Traits in Bacteria (open access)

Using Machine Learning to Predict Genes Underlying Differentiation of Multipartite and Unipartite Traits in Bacteria

Article describes how, since the discovery of the second chromosome in the Rhodobacter spaeroides 2.4.1 in 1989 and the revelation of gene sequences, multipartite genomes have been reported in over three hundred bacterial species under nine different phyla. In this study, the authors have attempted to leverage machine learning as a means to identify the genetic factors that underlie the differentiation of bacteria with multipartite and unipartite genomes.
Date: November 13, 2023
Creator: Almalki, Fatemah; Sunuwar, Janak & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Editorial Feature: Meet the PCP Editor—Ana Paula Alonso (open access)

Editorial Feature: Meet the PCP Editor—Ana Paula Alonso

This article is an editorial feature highlighting editor of Plant & Cell Physiology Dr. Ana Paula Alonso. She is currently an Associate Professor in the Department of Biological Sciences and serves as the Director of the BioAnalytical Facility at the University of North Texas.
Date: January 13, 2021
Creator: Alonso, Ana Paula
Object Type: Article
System: The UNT Digital Library
Digital Readiness Assessment of Countries in Africa: A Case Study Research (open access)

Digital Readiness Assessment of Countries in Africa: A Case Study Research

Conference paper seeking to answer these questions: What is the current state of digital readiness in African countries? Do existing digital readiness assessment tools, indicators, or metrics, help to assess the digital readiness of countries in Africa?
Date: October 13, 2021
Creator: Assefa, Shimelis; Rorissa, Abebe & Alemneh, Daniel Gelaw
Object Type: Paper
System: The UNT Digital Library
Empirical Studies on Effect of Low-Level Laser Treatment on Glioblastoma Multiforme in Combination with Ag-PMMA-PAA Nanoparticles: Paired Red Region Optical-Property Treatment Platform (open access)

Empirical Studies on Effect of Low-Level Laser Treatment on Glioblastoma Multiforme in Combination with Ag-PMMA-PAA Nanoparticles: Paired Red Region Optical-Property Treatment Platform

This article investigates low-level laser therapy for brain tumor treatment. The results provide evidence that the paired optical-driven agents provide a tunable platform that can generate significant U251 cell death increase.
Date: June 13, 2022
Creator: Atluri, Rohini; Korir, Daniel K.; Choi, Tae-Youl & Simmons, Denise Perry
Object Type: Article
System: The UNT Digital Library
Organization of knowledge and information in digital archives of language materials (open access)

Organization of knowledge and information in digital archives of language materials

This article reports the first empirical investigation of various dimensions of organization and representation of recorded knowledge and information in language archives. The study used a combination of semi-structured interviews and content analysis. Results demonstrate that, while some of the phenomena related to organization of information in language archives are specific to these types of archives, others are more typical and have been addressed by libraries in past research and practice.
Date: April 13, 2021
Creator: Burke, Mary; Zavalina, Oksana; Phillips, Mark Edward & Chelliah, Shobhana Lakshmi
Object Type: Article
System: The UNT Digital Library
A One-Pot Synthesis and Characterization of Antibacterial Silver Nanoparticle–Cellulose Film (open access)

A One-Pot Synthesis and Characterization of Antibacterial Silver Nanoparticle–Cellulose Film

Describes experiment analyzing the properties of an antibacterial silver nanoparticle–cellulose film.
Date: February 13, 2020
Creator: Chen, Qi-Yuan; Xiao, Shengling; Shi, Sheldon & Cai, Liping
Object Type: Article
System: The UNT Digital Library
Ideal plasticity and shape memory of nanolamellar high-entropy alloys (open access)

Ideal plasticity and shape memory of nanolamellar high-entropy alloys

Article describes how understanding the relationship among elemental compositions, nanolamellar microstructures, and mechanical properties enables the rational design of high-entropy alloys (HEAs). In this article the authors construct nanolamellar Alx-CoCuFeNi HEAs with alternating high- and low-Al concentration layers and explore their mechanical properties using a combination of molecular dynamic simulation and density functional theory calculation.
Date: October 13, 2023
Creator: Chen, Shuai; Liu, Ping; Pei, Qingxiang; Yu, Zhi Gen; Aitken, Zachary H.; Li, Wanghui et al.
Object Type: Article
System: The UNT Digital Library
Gemini Near Infrared Spectrograph–Distant Quasar Survey: Prescriptions for Calibrating UV-based Estimates of Supermassive Black Hole Masses in High-redshift Quasars (open access)

Gemini Near Infrared Spectrograph–Distant Quasar Survey: Prescriptions for Calibrating UV-based Estimates of Supermassive Black Hole Masses in High-redshift Quasars

Article describes how the most reliable single-epoch supermassive black hole mass (MBH) estimates in quasars are obtained by using the velocity widths of low-ionization emission lines, typically the Hβλ4861 line. The authors find that utilizing both emission lines, where available, reduces the scatter of UV-based MBH estimates by ∼15% when compared to previous studies.
Date: June 13, 2023
Creator: Dix, Cooper; Matthews, Brandon; Shemmer, Ohad; Brotherton, Michael S.; Myers, Adam D.; Andruchow, I. et al.
Object Type: Article
System: The UNT Digital Library
Phosphorus deprivation affects composition and spatial distribution of membrane lipids in legume nodules (open access)

Phosphorus deprivation affects composition and spatial distribution of membrane lipids in legume nodules

Article assessing membrane lipids in M. truncatula tissues using electrospray ionization–mass spectrometry. The results suggest that specific PC species may be differentially important in diverse nodule zones and cell types, and that membrane lipid remodeling during P stress is not uniform across the nodule.
Date: January 13, 2021
Creator: Dokwal, Dhiraj; Romsdahl, Trevor B.; Kunz, Daniel A.; Alonso, Ana Paula & Dickstein, Rebecca
Object Type: Article
System: The UNT Digital Library
Soil Erosion Vulnerability Mapping in Selected Rural Communities of uThukela Catchment, South Africa, Using the Analytic Hierarchy Process (open access)

Soil Erosion Vulnerability Mapping in Selected Rural Communities of uThukela Catchment, South Africa, Using the Analytic Hierarchy Process

Article presents a study (i) assessing and modeling soil erosion vulnerability based on the Analytic Hierarchy Process (AHP) approach in Hoffenthal and KwaMaye communities within the uThukela Catchment, South Africa; and (ii) identifying the relevant sustainable interventions and remedial strategies to combat soil erosion in the study area.
Date: May 13, 2022
Creator: Ebhuoma, Osadolor; Gebreslasie, Michael; Ngetar, Njoya Silas; Phinzi, Kwanele & Bhattacharjee, Shwarnali
Object Type: Article
System: The UNT Digital Library
Creating Open Access to a Historic Newspaper from an International Port City [Article] (open access)

Creating Open Access to a Historic Newspaper from an International Port City [Article]

Article exploring a collaboration between the University of North Texas' The Portal to Texas History and the Rosenberg Library to archive and provide digital, open access to Galveston's newspapers. It was published as part of the conference proceedings from 87th IFLA World Library and Information Congress (WLIC) held in 2022.
Date: July 13, 2022
Creator: Edsall, Brooke; Martino Henry, Lauren & Krahmer, Ana
Object Type: Article
System: The UNT Digital Library
Mediterranean Spur-Thighed Tortoises (Testudo graeca) Have Optimal Speeds at Which They Can Minimise the Metabolic Cost of Transport, on a Treadmill (open access)

Mediterranean Spur-Thighed Tortoises (Testudo graeca) Have Optimal Speeds at Which They Can Minimise the Metabolic Cost of Transport, on a Treadmill

Article experimentally quantifies the metabolic cost of transport in Mediterranean spur-thighed tortoises walking on a treadmill while also quantifying the kinematics of their movement. Results found that tortoises move more efficiently than predicted and presents the first data demonstrating a curvilinear cost of transport over their speed range. The authors conclude that tortoises have an optimum speed at which they move to minimise their metabolic cost of locomotion.
Date: July 13, 2022
Creator: Ewart, Heather; Tickle, Peter; Nudds, Robert; Sellers, William; Crossley, Dane A., II & Codd, Jonathan
Object Type: Article
System: The UNT Digital Library
Natural variation and improved genome annotation of the emerging biofuel crop field pennycress (open access)

Natural variation and improved genome annotation of the emerging biofuel crop field pennycress

Article describing pennycress genome annotation improvements using a combination of long- and short-read transcriptome data obtained from RNA derived from embryos of 22 accessions, in addition to public genome and gene expression information.
Date: April 13, 2022
Creator: García Navarrete, Tatiana; Arias, Cintia Lucía; Mukundi, Eric; Alonso, Ana Paula & Grotewold, Erich
Object Type: Article
System: The UNT Digital Library
CancerNet: a unified deep learning network for pan‑cancer diagnostics (open access)

CancerNet: a unified deep learning network for pan‑cancer diagnostics

Article states that despite remarkable advances in cancer research, cancer remains one of the leading causes of death worldwide. The author's proposed framework for cancer diagnostics detects cancers and their tissues of origin using a unified model of cancers encompassing 33 cancers represented in The Cancer Genome Atlas. Their model exploits the learned features of different cancers reflected in the respective dysregulated epigenomes, holding a great promise in early cancer detection.
Date: June 13, 2022
Creator: Gore, Steven & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Ice imaging in aircraft anti-icing fluid films using polarized light (open access)

Ice imaging in aircraft anti-icing fluid films using polarized light

Article presents how to enhance ice contrast in the visible spectrum by using ice birefringence and polarized light reflection. The method can be used for both visual inspection and automatic ice detection systems.
Date: December 13, 2021
Creator: Grishaev, Viktor G.; Usachev, Igor A.; Drachev, Vladimir P.; Gattarov, Ramil K.; Rudenko, Nadezhda I.; Amirfazli, Alidad et al.
Object Type: Article
System: The UNT Digital Library
School-Based Sedentary Behavior, Physical Activity, and Health-Related Outcomes among Hispanic Children in the United States: A Cross-Sectional Study (open access)

School-Based Sedentary Behavior, Physical Activity, and Health-Related Outcomes among Hispanic Children in the United States: A Cross-Sectional Study

The article highlights a study meant to examine the relationships between school-based sedentary behavior, physical activity, and health-related outcomes, including cardiorespiratory fitness, weight status, and health-related quality of life (HRQOL) among Hispanic children. Sedentary behavior was negatively correlated with cardiorespiratory fitness and HRQOL but positively associated with weight status. MVPA was positively correlated with cardiorespiratory fitness and HRQOL, but negatively associated with weight status and sedentary behavior. Multiple regressions demonstrated that sedentary behavior significantly predicted cardiorespiratory fitness and weight status, whereas MVPA significantly predicted HRQOL.
Date: February 13, 2020
Creator: Gu, Xiangli; Zhang, Tao; Chen, Senlin; Keller, M. Jean & Zhang, Xiaoxia
Object Type: Article
System: The UNT Digital Library
Key Challenges and Some Guidance on Using Strong Quantitative Methodology in Education Research (open access)

Key Challenges and Some Guidance on Using Strong Quantitative Methodology in Education Research

Article reviews several common areas of focus in quantitative methods with the hope of providing guidance on conducting and reporting quantitative analyses. The review addresses causal inferences, measurement issues, handling missing data, testing for assumptions, dealing with nested data, and providing evidence for outcomes.
Date: November 13, 2020
Creator: Henson, Robin K.; Stewart, Genéa & Bedford, Lee A.
Object Type: Article
System: The UNT Digital Library
The Relationships between Supply Chain Capability and Shareholder Value Using Financial Performance Indicators (open access)

The Relationships between Supply Chain Capability and Shareholder Value Using Financial Performance Indicators

Paper examines which financial performance indicators (FPIs) evaluate the level of supply chain capability (SCC) that explicitly touches all of the business functions and processes within and beyond the company.
Date: April 13, 2020
Creator: Hong, Seock-Jin & Najmi, Hossein
Object Type: Article
System: The UNT Digital Library
Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network (open access)

Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network

Article discovering a mechanism for how sphingolipids mediate phosphoinositide homeostasis at the TGN in plant cells. The data presented identifies a mode of action of sphingolipids in lipid interplay at the TGN during protein sorting.
Date: July 13, 2021
Creator: Ito, Yoko; Esnay, Nicolas; Platre, Matthieu Pierre; Wattelet-Boyer, Valérie; Noack, Lise C.; Fougère, Louise et al.
Object Type: Article
System: The UNT Digital Library
Thermally Tunable Acoustic Beam Splitter Based on Poly(vinyl alcohol) Poly(N-isopropylacrylamide) Hydrogel (open access)

Thermally Tunable Acoustic Beam Splitter Based on Poly(vinyl alcohol) Poly(N-isopropylacrylamide) Hydrogel

Article demonstrating a thermally tunable acoustic beam splitter using a poly(vinyl alcohol) poly(N-isopropylacrylamide) hydrogel (PVA-pNIPAM). The nature of PVA-pNIPAM hydrogel offers exceptional temperature-dependent physical properties due to its phase transition around its lower critical solution temperature. The acoustic impedance of the hydrogel can be tuned below, above, or matched to that of water by changing the environmental temperature. An acoustic wave propagating in water can be split into transmitted and reflected components by the PVA-pNIPAM hydrogel slab on varying its angle of incidence. The intensity ratio between the reflected and the transmitted componence can be adjusted by tuning the temperature of the medium. The acoustic beam can be entirely reflected at a temperature corresponding to the matched impedance between hydrogel and water. The beam-splitting behavior was observed for acoustic waves from both a monochromatic wave and broadband pulse source. In addition, the phase of beam split pulses can be reversed by selecting the hydrogel’s operating temperature.
Date: September 13, 2021
Creator: Jin, Yuqi; Zhou, Mi; Choi, Tae-Youl & Neogi, Arup
Object Type: Article
System: The UNT Digital Library
School counseling prevention programming to address social determinants of mental health (open access)

School counseling prevention programming to address social determinants of mental health

Article describes how school counselors can utilize the Advocating Student-within-Environment (ASE) theoretical lens as a liberation approach to strengthening students' capacity to overcome persistent adversity while addressing root causes of systemic oppression through policy change and advocacy at the school, community, and national levels. This study provides school counselors with an overview of ASE as a theoretical foundation for addressing social determinants of mental health in schools.
Date: May 13, 2023
Creator: Johnson, Kaprea F.; Kim, Hyunhee; Molina, Citlali E.; Thompson, Kaleb A.; Henry, Sarah & Zyromski, Brett
Object Type: Article
System: The UNT Digital Library
Formula-Driven, Size-Tunable Synthesis of PMMA Nanoparticles by Varying Surfactant Concentration (open access)

Formula-Driven, Size-Tunable Synthesis of PMMA Nanoparticles by Varying Surfactant Concentration

Paper presents a streamlined, reproducible synthetic method for the production of size-tunable poly(methyl methacrylate) (PMMA) nanoparticles (PMMANPs) and amine-functionalized block-copolymer PMMANPs (H2N-PMMANPs) by varying subcritical concentrations of sodium dodecyl sulfate (SDS).
Date: April 13, 2020
Creator: Kamras, Bryan L.; Mirzanasiri, Nooshin; Korir, Daniel K.; Mandal, Sujata; Hariharakumar, Shreya L.; Petros, Robby A. et al.
Object Type: Article
System: The UNT Digital Library
Crinet: A computational tool to infer genome-wide competing endogenous RNA (ceRNA) interactions (open access)

Crinet: A computational tool to infer genome-wide competing endogenous RNA (ceRNA) interactions

This article develops a computational tool named Crinet to infer genome-wide ceRNA networks addressing critical drawbacks. Crinet-inferred ceRNA groups that were consistently involved in the immune system related processes could be important assets in the light of the studies confirming the relation between immunotherapy and cancer. The source code of Crinet is in R and available at https://github.com/bozdaglab/crinet.
Date: May 13, 2021
Creator: Kesimoglu, Ziynet Nesibe & Bozdag, Serdar
Object Type: Article
System: The UNT Digital Library
Excavating theory in teacher evaluation: Implementing evaluation frameworks as Wengerian boundary objects (open access)

Excavating theory in teacher evaluation: Implementing evaluation frameworks as Wengerian boundary objects

This article explores the theory and practice between two existing conceptual frameworks: 1) social learning theory and 2) teacher evaluation systems.
Date: April 13, 2020
Creator: King, Kelley M. & Paufler, Noelle A.
Object Type: Article
System: The UNT Digital Library