Survival rates in the world's southernmost forest bird community (open access)

Survival rates in the world's southernmost forest bird community

Article asserts that the Magellanic sub-Antarctic Forest is home to the world's southernmost avian community and is the only Southern Hemisphere analogue to Northern Hemisphere temperate forests at this latitude. Authors describe annual survival patterns and their association with climate variables using a 20-year mark–recapture data set of five forest bird species in the Cape Horn Biosphere Reserve.
Date: June 20, 2023
Creator: Sandvig, Erik M.; Quilodrán, Claudio S.; Altamirano, Tomás A.; Aguirre, Francisco; Barroso, Omar; Rivero de Aguilar, Juan et al.
Object Type: Article
System: The UNT Digital Library
Metabolic and transcriptomic study of pennycress natural variation identifies targets for oil improvement (open access)

Metabolic and transcriptomic study of pennycress natural variation identifies targets for oil improvement

Article describes how, although pennycress, a winter annual, could be grown as a dedicated bioenergy crop, an increase in its seed oil content is required to improve its economic competitiveness. In this work, the authors combined biomass composition with metabolomic and transcriptomic studies of developing embryos from 22 pennycress natural variants to identify targets for oil improvement.
Date: June 19, 2023
Creator: Arias, Cintia Lucía; García Navarrete, Leidy Tatiana; Mukundi, Eric; Swanson, Tyler; Yang, Fan; Hernandez, Jonathan et al.
Object Type: Article
System: The UNT Digital Library
Systematic approaches to C-lignin engineering in Medicago truncatula (open access)

Systematic approaches to C-lignin engineering in Medicago truncatula

Article describes how C-lignin is a homopolymer of caffeyl alcohol present in the seed coats of a variety of plant species including vanilla orchid, various cacti, and the ornamental plant Cleome hassleriana. The authors used information from a transcriptomic analysis of developing C. hassleriana seed coats to suggest strategies for engineering C-lignin in a heterologous system, using hairy roots of the model legume Medicago truncatula.
Date: June 12, 2023
Creator: Ha, Chan Man; Escamilla-Treviño, Luis; Zhuo, Chunliu; Pu, Yunqiao; Bryant, Nathan; Ragauskas, Arthur J. (Arthur Jonas), 1957- et al.
Object Type: Article
System: The UNT Digital Library
Histological features of non-alcoholic fatty liver disease revealed in response to mixed vehicle emission exposure and consumption of a high-fat diet in wildtype C57Bl/6 male mice (open access)

Histological features of non-alcoholic fatty liver disease revealed in response to mixed vehicle emission exposure and consumption of a high-fat diet in wildtype C57Bl/6 male mice

Article describes how non-alcoholic fatty liver disease (NAFLD) is currently plaguing the population at pandemic proportions and is expected to become more prevalent over the next decade. The authors investigated the hypothesis that exposure to a mixture of gasoline and diesel engine emissions (MVE), coupled with the concurrent consumption of a HF diet, promotes the development of a NAFLD phenotype within the liver.
Date: June 6, 2023
Creator: Schneider, Leah J.; Santiago, Isabella; Johnson, Bailee; Stanley, Analana Hays; Penaredondo, Bea & Lund, Amie K.
Object Type: Article
System: The UNT Digital Library
Sustaining Human Nutrition in an Increasingly Urban World (open access)

Sustaining Human Nutrition in an Increasingly Urban World

This article proposes an urban nutrition (UN) extension to the previously published urban ecological economic system. The proposed extension can be used by decision makers worldwide to evaluate how landscape configurations and agricultural production systems affect the nutritional needs of the local population while fostering sustainable practices.
Date: June 22, 2022
Creator: Torres, Angélica Valencia; Tiwari, Chetan & Atkinson, Samuel F.
Object Type: Article
System: The UNT Digital Library
Lipidomic Analysis of Arabidopsis T-DNA Insertion Lines Leads to Identification and Characterization of C-Terminal Alterations in FATTY ACID DESATURASE 6 (open access)

Lipidomic Analysis of Arabidopsis T-DNA Insertion Lines Leads to Identification and Characterization of C-Terminal Alterations in FATTY ACID DESATURASE 6

Article states that mass-spectrometry-based screening of lipid extracts of wounded and unwounded leaves from a collection of 364 Arabidopsis thaliana T-DNA insertion lines produced lipid profiles that were scored on the number and significance of their differences from the leaf lipid profiles of wild-type plants. The analysis identified Salk_109175C, which displayed alterations in leaf chloroplast glycerolipid composition, including a decreased ratio between two monogalactosyldiacylglycerol (MGDG) molecular species, MGDG(18:3/16:3) and MGDG(18:3/18:3).
Date: June 21, 2022
Creator: Lusk, Hannah J.; Neumann, Nicholas; Colter, Madeline; Roth, Mary R.; Tamura, Pamela; Yao, Libin et al.
Object Type: Article
System: The UNT Digital Library
A role for ascorbate conjugates of (+)-catechin in proanthocyanidin polymerization (open access)

A role for ascorbate conjugates of (+)-catechin in proanthocyanidin polymerization

Article describes how both biochemically and genetically, that ascorbate (AsA) is an alternative “starter unit” to flavan-3-ol monomers for leucocyanidin-derived (+)-catechin subunit extension in the Arabidopsis thaliana anthocyanidin synthase (ans) mutant. The authors' findings advance the knowledge of (+)-catechin-type PA extension and indicate that PA oligomerization does not necessarily proceed by sequential addition of a single extension unit. AsA-[C]n defines a new type of PA intermediate which we term “sub-PAs”.
Date: June 14, 2022
Creator: Yu, Keji; Dixon, R. A. & Duan, Changquing
Object Type: Article
System: The UNT Digital Library
Transcriptome of Endophyte-Positive and Endophyte-Free Tall Fescue Under Field Stresses (open access)

Transcriptome of Endophyte-Positive and Endophyte-Free Tall Fescue Under Field Stresses

This article is a study that represents the first transcriptome analysis of E+ and E− Texoma tall fescue under freezing and chilling temperatures in the natural field environment.
Date: June 14, 2022
Creator: Islam, Shofiqul; Krom, Nick; Kwon, Taegun; Li, Guifen & Saha, Malay
Object Type: Article
System: The UNT Digital Library
CancerNet: a unified deep learning network for pan‑cancer diagnostics (open access)

CancerNet: a unified deep learning network for pan‑cancer diagnostics

Article states that despite remarkable advances in cancer research, cancer remains one of the leading causes of death worldwide. The author's proposed framework for cancer diagnostics detects cancers and their tissues of origin using a unified model of cancers encompassing 33 cancers represented in The Cancer Genome Atlas. Their model exploits the learned features of different cancers reflected in the respective dysregulated epigenomes, holding a great promise in early cancer detection.
Date: June 13, 2022
Creator: Gore, Steven & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
The flexibility of proanthocyanidin biosynthesis in plants (open access)

The flexibility of proanthocyanidin biosynthesis in plants

Article presents research that explores proanthocyanidin (PA) biosynthesis routes in plants. The data suggests that different species have evolved different routes for PA biosynthesis.
Date: June 13, 2022
Creator: Lu, Nan; Jun, Ji Hyung; Liu, Chenggang & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Proteomic and metabolic disturbances in lignin-modified Brachypodium distachyon (open access)

Proteomic and metabolic disturbances in lignin-modified Brachypodium distachyon

This article investigates global metabolic responses to lignin pathway perturbations in the model grass Brachypodium distachyon using a systems biology approach.
Date: June 7, 2022
Creator: Barros, Jaime; Shrestha, Him K.; Serrani-Yarce, Juan C.; Engle, Nancy L.; Abraham, Paul E.; Tschaplinski, Timothy J. et al.
Object Type: Article
System: The UNT Digital Library
The Long-Term Effects of Developmental Hypoxia on Cardiac Mitochondrial Function in Snapping Turtles (open access)

The Long-Term Effects of Developmental Hypoxia on Cardiac Mitochondrial Function in Snapping Turtles

This article investigates the long-term effects of developmental hypoxia on mitochondrial function in a species that regularly encounters hypoxia during development. Findings speculate that adjustments might improve mitochondrial hypoxia tolerance, which would be beneficial for turtles during breath-hold diving and overwintering in anoxic environments.
Date: June 28, 2021
Creator: Galli, Gina L. J.; Ruhr, Ilan M.; Crossley, Janna & Crossley, Dane A., II
Object Type: Article
System: The UNT Digital Library
Developmental Physiology: Grand Challenges (open access)

Developmental Physiology: Grand Challenges

Article indicating directions in which the field of Developmental Physiology might move. It suggests three categories of challenges: demonstrating broad relevance, promoting conceptual advances, and improving experimental approaches.
Date: June 10, 2021
Creator: Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Evidence of Endozoochory in Upland Geese Chloephaga picta and White-Bellied Seedsnipes Attagis malouinus in Sub-Antarctic Chile (open access)

Evidence of Endozoochory in Upland Geese Chloephaga picta and White-Bellied Seedsnipes Attagis malouinus in Sub-Antarctic Chile

This article evaluates the role of endozoochory in herbivorous and sympatric bird species in sub-Antarctic Chile. The authors hypothesize that fragments of bryophyte gametophytes retrieved from their feces are viable and capable of regenerating new plant tissue. This relationship may have important implications in the way bryophytes disperse and colonize habitats facing climate change.
Date: June 10, 2021
Creator: Lázaro, Xenabeth A.; Mackenzie, Roy & Jiménez, Jaime E.
Object Type: Article
System: The UNT Digital Library
Elucidating the multifunctional role of the cell wall components in the maize exploitation (open access)

Elucidating the multifunctional role of the cell wall components in the maize exploitation

Article on the composition of the four cell wall fractions in diverse maize genotypes and to understand how this composition influences the resistance to pests, ethanol capacity and digestibility. Results evidence that there is no maize cell wall ideotype among the tested for optimal performance for various uses, and maize plants should be specifically bred for each particular application.
Date: June 2, 2021
Creator: López-Malvar, Ana; Malvar, Rosa Ana; Souto, Xose Carlos; Gomez, Leonardo Dario; Simister, Rachael; Encina, Antonio et al.
Object Type: Article
System: The UNT Digital Library
First record of horned puffin in the North Atlantic and tufted puffin in High Arctic Greenland (open access)

First record of horned puffin in the North Atlantic and tufted puffin in High Arctic Greenland

Article reports observations of two Subarctic North Pacific puffin species in the North Atlantic near the coast of north-west Greenland.
Date: June 26, 2020
Creator: Johnson, Jeff A.; Burnham, Kurt K.; Burnham, Jennifer L.; Konkel, Bridger W.; Stephens, Jack & Badgett, Hannah
Object Type: Article
System: The UNT Digital Library
Genomic diversity of bacteriophages infecting Microbacterium spp (open access)

Genomic diversity of bacteriophages infecting Microbacterium spp

Article describing the isolation and genomic characterization of 116 phages that infect Microbacterium spp.
Date: June 18, 2020
Creator: Hughes, Lee E.; Jacobs-Sera, Deborah; Abad, Lawrence A.; Alvey, Richard M.; Anders, Kirk R.; Aull, Haley G. et al.
Object Type: Article
System: The UNT Digital Library
Range-wide genetic structure in the thorn-tailed rayadito suggests limited gene flow towards peripheral populations (open access)

Range-wide genetic structure in the thorn-tailed rayadito suggests limited gene flow towards peripheral populations

Article assessing range-wide genetic structure and contemporary gene flow in the thorn-tailed rayadito (Aphrastura spinicauda), a passerine bird inhabiting the temperate forests of South America.
Date: June 10, 2020
Creator: Botero-Delgadillo, Esteban; Quirici, Veronica; Poblete, Yanina; Acevedo, Matías; Cuevas, Élfego; Bravo, Camila et al.
Object Type: Article
System: The UNT Digital Library
Assessing distribution shifts and ecophysiological characteristics of the only Antarctic winged midge under climate change scenarios (open access)

Assessing distribution shifts and ecophysiological characteristics of the only Antarctic winged midge under climate change scenarios

Article integrating ecophysiological information with the development of new high-resolution climatic layers for Antarctica, to better understand how the distribution of P. steinenii may respond to change over the next century under different IPCC climate change scenarios. The authors conclude that the species has the potential to expand its distribution to include parts of the west and east coasts of the Antarctic Peninsula and even coastal ice-free areas in parts of continental Antarctica. The authors also propose P. steinenii as an effective native sentinel and indicator species of climate change in the Antarctic.
Date: June 3, 2020
Creator: Contador, Tamara; Gañán, Melisa; Bizama, Gustavo; Fuentes-Jaque, Guillermo; Morales, Luis; Rendoll, Javier et al.
Object Type: Article
System: The UNT Digital Library
Sarcoplasmic reticulum Ca²⁺-ATPase (SERCA) activity during the transition to endothermy in an altricial bird (open access)

Sarcoplasmic reticulum Ca²⁺-ATPase (SERCA) activity during the transition to endothermy in an altricial bird

Article describes SERCA activity in the pectoralis muscle and heart ventricle of red-winged blackbird (Agelaius phoeniceus) nestlings, fledglings and adults. Additionally, using a diet manipulation, the authors tested the hypothesis that muscle SERCA activity is affected by dietary fatty acid composition, as has been shown in some previous studies.
Date: June 28, 2019
Creator: Price, Edwin R.; Sirsat, Tushar S.; Sirsat, Sarah K. G. & Dzialowski, Edward M. (Edward Michael)
Object Type: Article
System: The UNT Digital Library
Hypoxia-induced reprogramming of the cardiac phenotype in American alligators (Alligator mississippiensis) revealed by quantitative proteomics (open access)

Hypoxia-induced reprogramming of the cardiac phenotype in American alligators (Alligator mississippiensis) revealed by quantitative proteomics

Article describes study which tested if targeted and persistent changes in steady-state protein expression underlie this hypoxic heart phenotype, using isobaric tags for relative and absolute quantitation (iTRAQ) proteomics.
Date: June 13, 2019
Creator: Alderman, Sarah L.; Crossley, Dane A., II; Elsey, Ruth M. & Gillis, Todd E.
Object Type: Article
System: The UNT Digital Library
Developmental plasticity of cardiac anoxia-tolerance in juvenile common snapping turtles ( Chelydra serpentina) (open access)

Developmental plasticity of cardiac anoxia-tolerance in juvenile common snapping turtles ( Chelydra serpentina)

Article describes study which tested the hypothesis that developmental hypoxia alters cardiomyocyte physiology in a manner that protects the heart from hypoxic stress.
Date: June 6, 2019
Creator: Ruhr, Ilan M.; McCourty, Heather; Bajjig, Afaf; Crossley, Dane A., II; Shiels, Holly A. & Galli, Gina L. J.
Object Type: Article
System: The UNT Digital Library
Biocultural homogenization: Exotism of the femenine landscape of latin america (open access)

Biocultural homogenization: Exotism of the femenine landscape of latin america

Article discusses the importance of valuing an alternative, ecological, aesthetic and post-modern-exotic hermeneutic in viewing Latin America, and discusses the colonial impression of a "exotic" Latin America.
Date: June 17, 2018
Creator: Castellanos, Angelina Paredes & Rozzi, Ricardo, 1960-
Object Type: Article
System: The UNT Digital Library
Gold at what cost? Another megaproject threatens biodiversity in the Amazon (open access)

Gold at what cost? Another megaproject threatens biodiversity in the Amazon

Article discusses concerns and controversy related to the gold mining ‘Volta Grande Project’ at the Xingu River in northern Brazil.
Date: June 26, 2017
Creator: Tófoli, Raffael M.; Dias, Rosa M.; Alves, Gustavo H. Zaia; Hoeinghaus, David J.; Gomes, Luiz C.; Baumgartner, Matheus T. et al.
Object Type: Article
System: The UNT Digital Library