Genetic Differentiation of the South Florida Red-Shouldered Hawk (Buteo lineatus extimus) from the Nominate Subspecies (Buteo lineatus lineatus) (open access)

Genetic Differentiation of the South Florida Red-Shouldered Hawk (Buteo lineatus extimus) from the Nominate Subspecies (Buteo lineatus lineatus)

Article discusses how the south Florida subspecies of the Red-shouldered Hawk (Buteo lineatus extimus) is distinctly paler and smaller than other subspecies, reproduces at a lower rate, and can occupy very different habitats such as open marshes and grasslands with only scattered trees. The authors evaluated population differentiation between the south Florida population of Red-shouldered Hawks and two populations of eastern Red-shouldered Hawks (B. l. lineatus) in suburban (Cincinnati) and rural (Hocking Hills) environments in southern Ohio.
Date: March 1, 2023
Creator: Dykstra, Madeline A.; Marain, Donna M.; Wrona, Anna M.; Dysktra, Cheryl R.; Farrington, Heather L.; Johnson, Jeff A. et al.
System: The UNT Digital Library
Transgenic manipulation of triacylglycerol biosynthetic enzymes in B. napus alters lipid-associated gene expression and lipid metabolism (open access)

Transgenic manipulation of triacylglycerol biosynthetic enzymes in B. napus alters lipid-associated gene expression and lipid metabolism

Article asserts that oilseed rape (Brassica napus) is an important crop that is cultivated for the oil (mainly triacylglycerol; TAG) it produces in its seeds. The author's results show that up-regulation of these key enzymes differentially affects lipid composition and distribution as well as lipid-associated gene expression, providing important information which could be used to improve crop properties by metabolic engineering.
Date: March 1, 2022
Creator: Liao, Pan; Lechon, Tamara; Romsdahl, Trevor; Woodfield, Helen K.; Fenyk, Stepan; Fawcett, Tony et al.
System: The UNT Digital Library
Structural Modeling and in planta Complementation Studies Link Mutated Residues of the Medicago truncatula Nitrate Transporter NPF1.7 to Functionality in Root Nodules (open access)

Structural Modeling and in planta Complementation Studies Link Mutated Residues of the Medicago truncatula Nitrate Transporter NPF1.7 to Functionality in Root Nodules

This article combines in silico structural predictions with in planta complementation of the severely defective mtnip-1 mutant plants to understand the role of a series of distinct amino acids in the transporter’s function. The findings add to the knowledge of the mechanism of alternative conformational changes as well as symport transport in NPFs and enhance knowledge of the mechanisms for nitrate signaling.
Date: July 1, 2021
Creator: Yu, Yao-Chuan; Dickstein, Rebecca & Longo, Antonella
System: The UNT Digital Library
Analysis of the potential behavioral impact of methanol when used as a solvent: Dataset from zebrafish (Danio rerio) behavioral research (open access)

Analysis of the potential behavioral impact of methanol when used as a solvent: Dataset from zebrafish (Danio rerio) behavioral research

This article is a dataset that describes behavioral results in zebrafish (Danio rerio) individually exposed to methanol, a solvent which is capable of altering physiology and behavior high concentrations.
Date: April 1, 2021
Creator: Hamilton, Trevor J.; Szaszkiewicz, Joshua; Krook, Jeffrey & Burggren, Warren W.
System: The UNT Digital Library
Multi-scale biodiversity drives temporal variability in macrosystems (open access)

Multi-scale biodiversity drives temporal variability in macrosystems

Article using decadal datasets that span aquatic and terrestrial macrosystems and structural equation modeling to show that local temporal variability and spatial synchrony increase temporal variability for entire macrosystems. This analysis is among the first to provide a quantitative argument for the value of regional species diversity.
Date: February 1, 2021
Creator: Patrick, Christopher J.; McCluney, Kevin E.; Ruhi, Albert; Gregory, Andrew; Sabo, John & Thorp, James H.
System: The UNT Digital Library
Toward Best Management Practices for Ecological Corridors (open access)

Toward Best Management Practices for Ecological Corridors

This article summarizes the best available information about managing ecological corridor systems. The aim with is to provide managers with a convenient guidance document and tool to assist in applying scientific management principles to management of corridors. It does not cover issues related to corridor design or political buy in, but focuses on how a corridor should be managed once it has been established.
Date: February 1, 2021
Creator: Gregory, Andrew; Spence, Emma; Beier, Paul & Garding, Emily
System: The UNT Digital Library
Draft Genome of the Common Snapping Turtle, Chelydra serpentina, a Model for Phenotypic Plasticity in Reptiles (open access)

Draft Genome of the Common Snapping Turtle, Chelydra serpentina, a Model for Phenotypic Plasticity in Reptiles

Article studying climate adaptation using common snapping turtles, Chelydra serpentina, as the model species. The genome and genetic variants identified here provide a foundation for future studies of adaptation to climate.
Date: December 1, 2020
Creator: Crossley, Dane A., II; Das, Debojyoti; Singh, Sunil Kumar; Bierstedt, Jacob; Erickson, Alyssa; Galli, Gina L. J. et al.
System: The UNT Digital Library
Preferential intracellular pH regulation is a common trait amongst fishes exposed to high environmental CO2 (open access)

Preferential intracellular pH regulation is a common trait amongst fishes exposed to high environmental CO2

Article testing the hypothesis that preferential pHi regulation is a widespread strategy of acid–base regulation among fish by measuring pHi regulation in 10 different fish species that are broadly phylogenetically separated, spanning six orders, eight families and 10 genera.
Date: June 17, 2019
Creator: Shartau, R. B.; Baker, D. W.; Harter, T. S.; Aboagye, D. L.; Allen, P. J.; Val, A. L. et al.
System: The UNT Digital Library
Non-conventional pathways enable pennycress (Thlaspi arvense L.) embryos to achieve high efficiency of oil biosynthesis (open access)

Non-conventional pathways enable pennycress (Thlaspi arvense L.) embryos to achieve high efficiency of oil biosynthesis

Article exploring how to improve oil production in Pennycress (Thlaspi arvense L.).
Date: February 1, 2020
Creator: Cocuron, Jean-Christophe; Alonso, Ana Paula & Tsogtbaatar, Enkhtuul
System: The UNT Digital Library
IslandCafe: Compositional Anomaly and Feature Enrichment Assessment for Delineation of Genomic Islands (open access)

IslandCafe: Compositional Anomaly and Feature Enrichment Assessment for Delineation of Genomic Islands

Article discusses IslandCafe, a proposed method for genomic island detection.
Date: October 1, 2019
Creator: Jani, Mehul & Azad, Rajeev K.
System: The UNT Digital Library
Effect of MS222 on Hemostasis in Zebrafish (open access)

Effect of MS222 on Hemostasis in Zebrafish

Article studying the effect of MS222 on hemostasis in Zebrafish. The authors performed various assays and find that Hct values, the amount of blood collected, bleeding, and coagulation differ significantly between anesthetized and nonanesthetized fish. These results suggest that blood collected after MS222 anesthesia of zebrafish has altered hemostasis.
Date: May 1, 2019
Creator: Afnan, Deebani; Iyer, Neha; Raman, Revathi & Jagadeeswaran, Pudur
System: The UNT Digital Library
Does the left aorta provide proton-rich blood to the gut when crocodilians digest a meal? (open access)

Does the left aorta provide proton-rich blood to the gut when crocodilians digest a meal?

Article measuring blood parameters in the left aortae and atria of crocodilians. The findings do not support the hypothesis that a R–L shunt serves to deliver CO2 for the gastrointestinal system after feeding in crocodilians.
Date: February 4, 2019
Creator: Conner, Justin L.; Crossley, Janna; Elsey, Ruth M.; Nelson, Derek; Wang, Tobias & Crossley, Dane A., II
System: The UNT Digital Library
A Simple Method for Measuring Apoplast Hydration and Collecting Apoplast Contents (open access)

A Simple Method for Measuring Apoplast Hydration and Collecting Apoplast Contents

This article describes a refined method optimized for maize (Zea mays) seedling leaves, which not only provides a simple procedure for obtaining apoplast fluid, but also allows direct calculation of apoplast hydration at the time of harvest for every sample.
Date: March 1, 2019
Creator: Gentzel, Irene; Giese, Laura; Zhao, Wanying; Alonso, Ana Paula & Mackey, David
System: The UNT Digital Library
Complete Genome Sequences of 44 Arthrobacter Phages (open access)

Complete Genome Sequences of 44 Arthrobacter Phages

This article reports the complete genome sequences of 44 phages infecting Arthrobacter sp. strain ATCC 21022.
Date: February 1, 2018
Creator: Klyczek, Karen; Jacobs-Sera, Deborah; Adair, Tamarah; Adams, Sandra D.; Ball, Sarah; Benjamin, Robert C. et al.
System: The UNT Digital Library
Developmental plasticity of mitochondrial function in American alligators, Alligator mississippiensis (open access)

Developmental plasticity of mitochondrial function in American alligators, Alligator mississippiensis

This article investigates the effects of chronic developmental hypoxia on cardiac mitochondrial function in embryonic and juvenile American alligators (Alligator mississippiensis).
Date: October 1, 2016
Creator: Galli, Gina L. J.; Crossley, Janna; Elsey, Ruth M.; Dzialowski, Edward M. (Edward Michael); Shiels, Holly A. & Crossley, Dane A., II
System: The UNT Digital Library
Salt Sensitivity of the Morphometry of Artemia Franciscana During Development: A Demonstration of 3d Critical Windows (open access)

Salt Sensitivity of the Morphometry of Artemia Franciscana During Development: A Demonstration of 3d Critical Windows

This article uses a 3D conceptual farmework of 'critical windows' to examine whether the morphometry of Artemia franciscana is altered by salinity exposure during certain key periods of development.
Date: December 1, 2015
Creator: Mueller, Casey A.; Willis, Eric & Burggren, Warren W.
System: The UNT Digital Library
Complete Genome Sequence of a Cyanotroph, Pseudomonas fluorescens NCIMB 11764, Employing Single-Molecule Real-Time Technology (open access)

Complete Genome Sequence of a Cyanotroph, Pseudomonas fluorescens NCIMB 11764, Employing Single-Molecule Real-Time Technology

This article reports the application of single-molecule real-time sequencing for determining the entire genome structure of the cyanotroph Pseudomonas fluorescens NCIMB 11764.
Date: October 1, 2015
Creator: Jones, Lauren B. & Kunz, Daniel A.
System: The UNT Digital Library
A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick) (open access)

A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick)

This article involves mapping the probability of occurrence that the disease vector exists in the environment, mapping the incidence of Lyme disease in the human population and examining the spatial concordance between the probability map and incidence map.
Date: November 1, 2014
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
System: The UNT Digital Library
HSI2/VAL1 PHD-like domain promotes H3K27 trimethylation to repress the expression of seed maturation genes and complex transgenes in Arabidopsis seedlings (open access)

HSI2/VAL1 PHD-like domain promotes H3K27 trimethylation to repress the expression of seed maturation genes and complex transgenes in Arabidopsis seedlings

This article studies the novel mutant allele hsi2-4, isolated in a genetic screen to identify Arabidopsis mutants with consitutively elevated expression of a glutathione S-transferase F8:luciferase reporter gene in Arabidopsis.
Date: November 1, 2014
Creator: Veerappan, Vijaykumar; Chen, Naichong; Reichert, Angelika & Allen, Randy D.
System: The UNT Digital Library
Oleanolic acid and its synthetic derivatives for the prevention and therapy of cancer: Preclinical and clinical evidence (open access)

Oleanolic acid and its synthetic derivatives for the prevention and therapy of cancer: Preclinical and clinical evidence

Article on oleanolic acid and its synthetic derivatives for the prevention and therapy of cancer with preclinical and clinical evidence.
Date: May 1, 2014
Creator: Shanmugam, Muthu K.; Dai, Xiaoyun; Kumar, Alan Prem; Tan, Benny K-H; Sethi, Gautam & Bishayee, Anupam
System: The UNT Digital Library
Targeted abrogation of diverse signal transduction cascades by emodin for the treatment of inflammatory disorders and cancer (open access)

Targeted abrogation of diverse signal transduction cascades by emodin for the treatment of inflammatory disorders and cancer

Article on the targeted abrogation of diverse signal transduction cascades by emodin for the treatment of inflammatory disorders and cancer.
Date: December 1, 2013
Creator: Shrimali, Deepti; Shanmugam, Muthu K.; Kumar, Alan Prem; Zhang, Jingwen; Tan, Benny K-H; Ahn, Kwang Seok et al.
System: The UNT Digital Library
Emodin inhibits growth and induces apoptosis in an orthotopic hepatocellular carcinoma model by blocking activation of STAT3 (open access)

Emodin inhibits growth and induces apoptosis in an orthotopic hepatocellular carcinoma model by blocking activation of STAT3

Article on emodin inhibiting growth and inducing apoptosis in an orthotopic hepatocellular carcinoma model by blocking activation of STAT3.
Date: October 1, 2013
Creator: Subramaniam, Aruljothi; Shanmugam, Muthu K.; Ong, Tina H.; Li, Feng; Perumal, Ekambaram; Chen, Luxi et al.
System: The UNT Digital Library
Digital equivalence of biological neural AND-gate, OR-gate and MIN-Gate (open access)

Digital equivalence of biological neural AND-gate, OR-gate and MIN-Gate

Article discussing the digital equivalence of biological neural AND-gate, OR-gate and MIN-gate.
Date: September 1, 2013
Creator: Tam, Nicoladie D.
System: The UNT Digital Library
Arabidopsis Thaliana--Myzus Persicae Interaction: Shaping the Understanding of Plant Defense Against Phloem-Feeding Aphids (open access)

Arabidopsis Thaliana--Myzus Persicae Interaction: Shaping the Understanding of Plant Defense Against Phloem-Feeding Aphids

This review article summarizes recent studies that have exploited the compatible interaction between Arabidopsis and the green peach aphid (GPA) to understand the molecular and physiological mechanisms utilized by plants to control aphid infestation, as well as genes and mechanisms that contribute to susceptibility.
Date: July 1, 2013
Creator: Louis, Joe & Shah, Jyoti
System: The UNT Digital Library