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Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes (open access)

Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes

This article explores the use of an information-entropy-based gene clustering method for genomic island detection in MRSA.
Date: November 16, 2017
Creator: Jani, Mehul; Sengupta, Soham; Hu, Kelsey & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Body shape differences in a pair of closely related Malawi cichlids and their hybrids: Effects of genetic variation, phenotypic plasticity, and transgressive segregation (open access)

Body shape differences in a pair of closely related Malawi cichlids and their hybrids: Effects of genetic variation, phenotypic plasticity, and transgressive segregation

This article investigates the contributions of genetic and plastic components for differences in body shape in two species of Lake Malawi cichlids using wild-caught specimens and a common garden experiment.
Date: January 28, 2017
Creator: Husemann, Martin; Tobler, Michael; McCauley, Cagney; Ding, Baoqing & Danley, Patrick D.
Object Type: Article
System: The UNT Digital Library
Computational design of environmental sensors for the potent opioid fentanyl (open access)

Computational design of environmental sensors for the potent opioid fentanyl

This article describes the computational design of proteins that bind the potent analgesic fentanyl.
Date: September 19, 2017
Creator: Bick, Matthew J.; Greisen, Per J.; Morey, Kevin J.; Antunes, Mauricio S.; La, David; Sankaran, Banumathi et al.
Object Type: Article
System: The UNT Digital Library
Phylogenetic analysis of eukaryotic NEET proteins uncovers a link between a key gene duplication event and the evolution of vertebrates (open access)

Phylogenetic analysis of eukaryotic NEET proteins uncovers a link between a key gene duplication event and the evolution of vertebrates

This article describes the use of three members of the human NEET protein family (CISD1, mitoNEET; CISD2, NAF-1 or Miner 1; and CISD3, Miner2) as guides to conduct a phylogenetic analysis of eukaryotic NEET proteins and their evolution.
Date: February 16, 2017
Creator: Inupakutika, Madhuri A.; Sengupta, Soham; Nechushtai, Rachel; Jennings, Patricia A.; Onuchic, José N.; Azad, Rajeev K. et al.
Object Type: Article
System: The UNT Digital Library
Interactions between mitoNEET and NAF-1 in cells (open access)

Interactions between mitoNEET and NAF-1 in cells

This article uses yeast two-hybrid to demonstrate through vivo bimolecular fluorescence complementation (BiFC), direct coupling analysis (DCA), RNA-sequencing, ROS and iron imaging, and single and double shRNA lines with suppressed mNT, NAF-1 and mNT/NAF-1 expression, that mNT and NAF-1 directly interact in mammalian cells and could function in the same cellular pathway.
Date: April 20, 2017
Creator: Karmi, Ola; Holt, Sarah H.; Song, Luhua; Tamir, Sagi; Luo, Yuting; Bai, Fang et al.
Object Type: Article
System: The UNT Digital Library
Identification of bottlenecks in the accumulation of cyclic fatty acids in camelina seed oil (open access)

Identification of bottlenecks in the accumulation of cyclic fatty acids in camelina seed oil

This article proposes a model for the accumulation of substantial levels of cyclopropane fatty acids (CPA) in camelina, and discusses the differences between CPA accumulation in camelina and Arabidopsis.
Date: July 10, 2017
Creator: Yu, Xiao-Hong; Cahoon, Rebecca E.; Horn, Patrick J.; Shi, Hai; Prakash, Richa R.; Cai, Yuanheng et al.
Object Type: Article
System: The UNT Digital Library
Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains (open access)

Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains

This article predicts that marine-derived bacteria should inhibit Vibrio pathogens and may be a source of unique antibiotic compounds.
Date: March 10, 2017
Creator: Burks, David J.; Norris, Stephen; Kauffman, Kathryn M.; Joy, Abigail; Arevalo, Philip; Azad, Rajeev K. et al.
Object Type: Article
System: The UNT Digital Library
MALDI-MS Imaging of Urushiols in Poison Ivy Stem (open access)

MALDI-MS Imaging of Urushiols in Poison Ivy Stem

This article reports on the first analysis of urushiols in poison ivy stems by matrix-assisted laser desorption/ionization-mass spectrometry imaging (MALDI-MSI).
Date: April 29, 2017
Creator: Aziz, Mina; Sturtevant, Drew; Winston, Jordan; Collakova, Eva; Jelesko, John G. & Chapman, Kent D.
Object Type: Article
System: The UNT Digital Library
Xenopus and the art of oxygen maintenance (open access)

Xenopus and the art of oxygen maintenance

This column article discusses the impact of Robert Boutillier and Graham Shelton's 1986 Journal of Experimental Biology paper "Gas exchange, storage and transport in voluntarily diving Xenopus laevis."
Date: November 15, 2017
Creator: Tattersall, Glenn & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Concept Inventory Development Reveals Common Student Misconceptions about Microbiology (open access)

Concept Inventory Development Reveals Common Student Misconceptions about Microbiology

This article identifies misconceptions in microbiology held by undergraduate students upon entry into an introductory, general microbiology course.
Date: October 30, 2017
Creator: Briggs, Amy G.; Hughes, Lee E.; Brennan, R. E.; Buchner, John; Horak, Rachel E. A.; Katz-Amburn, D. Sue et al.
Object Type: Article
System: The UNT Digital Library
Development, Validation, and Application of the Microbiology Concept Inventory (open access)

Development, Validation, and Application of the Microbiology Concept Inventory

This article describes the creation and validation of a new microbiology concept inventory using the American Society for Microbiology Curriculum Guidelines.
Date: October 5, 2017
Creator: Paustian, Timothy D.; Briggs, Amy G.; Brennan, R. E.; Boury, Nancy; Buchner, John; Harris, Shannon et al.
Object Type: Article
System: The UNT Digital Library
Extensive shared polymorphism at non-MHC immune genes in recently diverged North American prairie grouse (open access)

Extensive shared polymorphism at non-MHC immune genes in recently diverged North American prairie grouse

This article investigates the patterns of shared polymorphism and selection at non-MHC immune genes in five grouse species from Centrocercus and Tympanuchus genera.
Date: August 2, 2017
Creator: Minias, Piotr; Bateson, Zachary W.; Whittingham, Linda A.; Johnson, Jeff A.; Oyler-McCance, Sara & Dunn, Peter O.
Object Type: Article
System: The UNT Digital Library
Non-invasive Measures of Core Temperature versus Ingestible Thermistor during Exercise in the Heat (open access)

Non-invasive Measures of Core Temperature versus Ingestible Thermistor during Exercise in the Heat

This article discusses a study to cross-validate temporal, two tympanic devices, and oral devices compared to an ingestible thermistor during exercise in a hot, humid environment.
Date: March 2017
Creator: Fogt, Donovan L.; Henning, Andrea L.; Venable, Adam S. & McFarlin, Brian K.
Object Type: Article
System: The UNT Digital Library
An Evaluation of Northern Bobwhite Conservation Research: A Call for Large-Scale Studies (open access)

An Evaluation of Northern Bobwhite Conservation Research: A Call for Large-Scale Studies

This paper reviews current and historical studies that have facilitated the implementation of management techniques on multiple scales.
Date: July 25, 2017
Creator: Gomez, Lex J. & Reyna, Kelly S.
Object Type: Paper
System: The UNT Digital Library
Predicting Northern Bobwhite Habitat in Semiarid Rangeland Using LANDSAT Imagery (open access)

Predicting Northern Bobwhite Habitat in Semiarid Rangeland Using LANDSAT Imagery

This paper discusses a classification on 4 LANDSAT scenes of Clay County, Texas, from July and December 2015 to identify bobwhite habitat in subhumid and semiarid rangeland.
Date: July 25, 2017
Creator: Whitt, Jeffrey G. & Reyna, Kelly S.
Object Type: Paper
System: The UNT Digital Library
Retention and Efficacy of Citizen Scientist Volunteers of the Texas Quail Index (open access)

Retention and Efficacy of Citizen Scientist Volunteers of the Texas Quail Index

This paper discusses volunteer retention and efficacy for the Texas Quail Index.
Date: July 25, 2017
Creator: Reyna, Kelly S. & Rollins, Dale
Object Type: Paper
System: The UNT Digital Library
Translocation as a Population Restoration Technique for Northern Bobwhites: A Review and Synthesis (open access)

Translocation as a Population Restoration Technique for Northern Bobwhites: A Review and Synthesis

This paper includes a review and recommendation by the National Bobwhite Technical Committee Science Subcommittee, along with a discussion of the state of science on key aspects of bobwhite conservation, best management practices for translocation, and ways to reduce uncertainty about implementation.
Date: July 25, 2017
Creator: Martin, James A.; Applegate, Roger D.; Dailey, Thomas V.; Downey, Michelle; Emmerich, Beth; Hernández, Fidel et al.
Object Type: Paper
System: The UNT Digital Library
A Brief History of Insecticides and Quail (open access)

A Brief History of Insecticides and Quail

This paper examines the types of insecticides that have been used in the United States, how quail could be exposed to these substances, and how they may have contributed to declining quail populations.
Date: July 25, 2017
Creator: Gobeli, Amanda; Thompson, Caitlin & Reyna, Kelly S.
Object Type: Paper
System: The UNT Digital Library
Wnt signaling in triple-negative breast cancer (open access)

Wnt signaling in triple-negative breast cancer

This review summarizes the involvement of dysregulated Wnt signaling in the progression of triple-negative breast cancer (TNBC) and TNBC stem cells, as well as the emerging therapies that are currently under investigation.
Date: January 24, 2017
Creator: Pohl, Sebastian Öther-Gee; Brook, N; Agostino, M.; Arfuso, Frank & Kumar, Alan Prem
Object Type: Review
System: The UNT Digital Library
Critical Developmental Windows for Morphology and Hematology Revealed by Intermittent and Continuous Hypoxic Incubation in Embryos of Quail (Coturnix Coturnix) (open access)

Critical Developmental Windows for Morphology and Hematology Revealed by Intermittent and Continuous Hypoxic Incubation in Embryos of Quail (Coturnix Coturnix)

This article describes the exposure of quail embryos in the intact egg to hypoxia during "early" or "late" incubation for their entire 16-18 day incubation to determine critical windows for viability and growth.
Date: November 14, 2016
Creator: Burggren, Warren W. & Elmonoufy, Nourhan
Object Type: Article
System: The UNT Digital Library
Evidence for the Involvement of Electrical, Calcium and ROS Signaling in the Systemic Regulation of Non-Photochemical Quenching and Photosynthesis (open access)

Evidence for the Involvement of Electrical, Calcium and ROS Signaling in the Systemic Regulation of Non-Photochemical Quenching and Photosynthesis

Article presents study in which pulse amplitude-modulated Chl fluorescence imaging and surface electrical potential measurements accompanied by pharmacological treatments were employed to study stimuli-induced electrical signals in leaves from a broad range of plant species and in Arabidopsis thaliana mutants.
Date: February 10, 2017
Creator: Białasek, Maciej; Górecka, Magdalena; Mittler, Ron & Karpiński, Stanisław
Object Type: Article
System: The UNT Digital Library
Lophozonia tree cavities used for nesting by Slender-billed Parakeets (Enicognathus leptorhynchus) in the central valley of southern Chile: a potentially vanishing keystone resource (open access)

Lophozonia tree cavities used for nesting by Slender-billed Parakeets (Enicognathus leptorhynchus) in the central valley of southern Chile: a potentially vanishing keystone resource

This article describes and quantifies characteristics of southern beech (Lophoonia obliqua) trees and their associated cavities used for nesting by Slender-billed Parakeets in the central valley of southern Chile.
Date: February 6, 2017
Creator: White, Thomas H., Jr. & Jiménez, Jaime E.
Object Type: Article
System: The UNT Digital Library
Body shape differences in a pair of closely related Malawi cichlids and their hybrids: Effects of genetic variation, phenotypic plasticity, and transgressive segregation (open access)

Body shape differences in a pair of closely related Malawi cichlids and their hybrids: Effects of genetic variation, phenotypic plasticity, and transgressive segregation

Article describes study which investigated the contributions of both genetic and plastic components for differences in body shape in two species of Lake Malawi cichlids using wild‐caught specimens and a common garden experiment.
Date: May 10, 2017
Creator: Husemann, Martin; Tobler, Michael; McCauley, Cagney; Ding, Baoqing & Danley, Patrick D.
Object Type: Article
System: The UNT Digital Library
Direct Pcr Amplification of Dna From Human Bloodstains, Saliva, and Touch Samples Collected With Microfloq® Swabs (open access)

Direct Pcr Amplification of Dna From Human Bloodstains, Saliva, and Touch Samples Collected With Microfloq® Swabs

This article investigates the efficacy of direct amplification of DNA from bloodstains, saliva stains, and touch samples using microFLOQ® Direct swabs and the GlobalFiler™ Express system (Thermo Fisher Scientific, Waltham, MA).
Date: October 26, 2017
Creator: Ambers, Angie D.; Wiley, Rachel; Novroski, Nicole & Budowle, Bruce
Object Type: Article
System: The UNT Digital Library