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Dynamics of Epigenetic Phenomena: Intergenerational and Intragenerational Phenotype 'Washout' (open access)

Dynamics of Epigenetic Phenomena: Intergenerational and Intragenerational Phenotype 'Washout'

This review contains a discussion of epigenetic dynamics in comparative biology with a focus on a more organismal level perspective, befitting of comparative physiology, that considers complex phenotypic changes.
Date: January 7, 2015
Creator: Burggren, Warren W.
Object Type: Review
System: The UNT Digital Library
The Multifaceted Role of Curcumin in Cancer Prevention and Treatment (open access)

The Multifaceted Role of Curcumin in Cancer Prevention and Treatment

This review focuses on the diverse molecular targets modulated by curcumin that contribute to its efficacy against various human cancers.
Date: February 5, 2015
Creator: Shanmugam, Muthu K.; Rane, Grishma; Mathi Kanchi, Madhu; Arfuso, Frank; Chinnathambi, Arunachalam; Zayed, M.E. et al.
Object Type: Review
System: The UNT Digital Library
Replication Concepts for Bioenergy Research Experiments (open access)

Replication Concepts for Bioenergy Research Experiments

This article discusses examples and guidelines to form the general policy and guidelines for replication of bioenergy feedstock experiments to be published in BioEnergy Research.
Date: February 5, 2015
Creator: Casler, Michael D.; Vermerris, Wilfred & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Quantitative assessment of sad emotion (open access)

Quantitative assessment of sad emotion

Article on a quantitative assessment of sad emotion.
Date: February 12, 2015
Creator: Tam, Nicoladie D.
Object Type: Article
System: The UNT Digital Library
Garcinol sensitizes human head and neck carcinoma to cisplatin in a xenoraft mouse model despite downregulation of proliferative biomarkers (open access)

Garcinol sensitizes human head and neck carcinoma to cisplatin in a xenoraft mouse model despite downregulation of proliferative biomarkers

This article investigates whether garcinol, a polyisoprenylated benzophenone can chemosensitize HNSCC to cisplatin.
Date: February 28, 2015
Creator: Li, Feng; Shanmugam, Muthu K.; Siveen, Kodappully Sivaraman; Wang, Fan; Ong, Tina H.; Loo, Ser Yue et al.
Object Type: Article
System: The UNT Digital Library
Comparative Genomics of Cluster O Mycobacteriophages (open access)

Comparative Genomics of Cluster O Mycobacteriophages

This article describes a group of five closely related mycobacteriophages--Corndog, Catdawg, Dylan, Firecracker, and YungJamal--designated as Cluster O with long flexible tails but with unusual prolate capsids
Date: March 5, 2015
Creator: Cresawn, Steven G.; Pope, Welkin H.; Jacobs-Sera, Deborah; Bowman, Charles A.; Russell, Daniel A.; Dedrick, Rebekah M. et al.
Object Type: Article
System: The UNT Digital Library
A decision-making phase-space model for fairness assessment (open access)

A decision-making phase-space model for fairness assessment

Article on a decision-making phase-space model for fairness assessment.
Date: March 6, 2015
Creator: Tam, Nicoladie D.
Object Type: Article
System: The UNT Digital Library
Rational decision-making process choosing fairness over monetary gain as decision criteria (open access)

Rational decision-making process choosing fairness over monetary gain as decision criteria

Article on rational decision-making process choosing fairness over monetary gain as decision criteria.
Date: March 6, 2015
Creator: Tam, Nicoladie D.
Object Type: Article
System: The UNT Digital Library
The Prognostic Value of the Stem-Like Group in Colorectal Cancer Using a Panel of Immunohistochemistry Markers (open access)

The Prognostic Value of the Stem-Like Group in Colorectal Cancer Using a Panel of Immunohistochemistry Markers

This article examines the immunohistochemical expression profile of 18 markers, each representing a putative role in cancer development, in 493 primary colorectal carcinomas using tissue microarrays.
Date: March 26, 2015
Creator: Ong, Chee Wee; Chong, Pei Yi; McArt, Darragh G.; Chan, Jason Yongsheng; Tan, Hwee Tong; Kumar, Alan Prem et al.
Object Type: Article
System: The UNT Digital Library
Expansión de la invasión del Visón Norteamericano (Neovison vison) en la Reserva de la Biosfera de Cabo de Hornos, Chile (open access)

Expansión de la invasión del Visón Norteamericano (Neovison vison) en la Reserva de la Biosfera de Cabo de Hornos, Chile

This article reports the continued expansion of the American mink to new sites in the Cape Horn Biosphere Reserve.
Date: April 17, 2015
Creator: Crego, Ramiro D.; Jiménez, Jaime E. & Rozzi, Ricardo, 1960-
Object Type: Article
System: The UNT Digital Library
Transgenic approaches to altering carbon and nitrogen partitioning in whole plants: assessing the potential to improve crop yields and nutritional quality (open access)

Transgenic approaches to altering carbon and nitrogen partitioning in whole plants: assessing the potential to improve crop yields and nutritional quality

This article summarizes the key transport steps involved in organic carbon and nitrogen compound partitioning, and discusses various transgenic approaches for directly manipulating key carbon and nitrogen transporters involved.
Date: April 22, 2015
Creator: Yadav, Umesh P.; Ayre, Brian G. & Bush, Daniel R.
Object Type: Article
System: The UNT Digital Library
RNA helicase DP103 and TAK1: a new connection in cancer (open access)

RNA helicase DP103 and TAK1: a new connection in cancer

Article on new markers of tumor metastasis. The authors found that expression of DP103 was significantly upregulated in the metastatic basal subtype of breast cancers in 3 independent cohorts. This elevated DP103 expression correlated with metastatic breast cancer gene signatures and was strongly associated with patient survival. This study provides the first evidence that the RNA helicase DEAD-box protein DP103 is an NF-kB target that could form part of a positive feedback loop contributing to DP103- mediated regulation of TAK1 kinase activity on the major NF-kB kinase IKK2, thus implicating DP103 in the maintenance of this oncogenic signaling arm in human cancer.
Date: May 6, 2015
Creator: Shin, Eun Myoung; Osato, Motomi; Kumar, Alan Prem & Tergaonkar, Vinay
Object Type: Article
System: The UNT Digital Library
Commentary: Feedback stabilizes propagation of synchronous spiking in cortical neural networks (open access)

Commentary: Feedback stabilizes propagation of synchronous spiking in cortical neural networks

This article provides a commentary on the article "Feedback stabilizes propagation of synchronous spiking in cortical neural networks" by Moldakarimov, S., Bazhenov, M., and Sejnowski, T.J.
Date: June 10, 2015
Creator: Claverol-Tinturé, Enric & Gross, Guenter W.
Object Type: Article
System: The UNT Digital Library
Tobacco Drought Stress Responses Reveal New Targets for Solanaceae Crop Improvement (open access)

Tobacco Drought Stress Responses Reveal New Targets for Solanaceae Crop Improvement

This article proposes components of a core metabolic response to drought stress in plants and shows that some major responses to drought stress at the metabolome and transcriptome levels are family specific.
Date: June 30, 2015
Creator: Rabara, Roel C.; Tripathi, Prateek & Reese, R. Neil
Object Type: Article
System: The UNT Digital Library
Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging (open access)

Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging

This article demonstrates the power of infrared microspectroscopy to rapidly image plan sections to provide a snapshot of the chemical composition of the cell.
Date: July 10, 2015
Creator: Lupoi, Jason S.; Smith-Mortiz, Andreia; Singh, Seema; McQualter, Richard B.; Scheller, Henrik V.; Simmons, Blake A. et al.
Object Type: Article
System: The UNT Digital Library
Review of laboratory-based terrestrial bioaccumulation assessment approaches for organic chemicals: Current status and future possibilities (open access)

Review of laboratory-based terrestrial bioaccumulation assessment approaches for organic chemicals: Current status and future possibilities

Article discusses the state of the science and existing shortcomings in terrestrial bioaccumulation assessment of neutral organic chemicals.
Date: August 13, 2015
Creator: Hoke, Robert; Huggett, Duane B.; Brasfield, Sandra; Brown, Becky; Embry, Michelle; Fairbrother, Anne et al.
Object Type: Article
System: The UNT Digital Library
Role of a chalcone isomerase-like protein in flavonoid biosynthesis in Arabidopsis thaliana (open access)

Role of a chalcone isomerase-like protein in flavonoid biosynthesis in Arabidopsis thaliana

This article identifies two chil mutants with a seed colour similar to that of wild-type Arabidopsis, but in sharp contrast to the characteristic transparent testa seed phenotype associated with other known flavonoid pathway genes.
Date: August 13, 2015
Creator: Jiang, Wenbo; Yin, Qinggang; Wu, Ranran; Zheng, Guangshun; Liu, Jinyue; Dixon, R. A. et al.
Object Type: Article
System: The UNT Digital Library
Draft Genome Sequence of a Bacillus Bacterium from the Atacama Desert Wetlands Metagenome (open access)

Draft Genome Sequence of a Bacillus Bacterium from the Atacama Desert Wetlands Metagenome

This article reports the draft genome sequence of a Bacillus bacterium isolated from the microflora of Nostoc colonies grown at the Andean wetlands in northern Chile.
Date: August 20, 2015
Creator: Vilo, Claudia A.; Galetovic, Alexandra; Araya, Jorge E.; Gómez-Silva, Benito & Dong, Qunfeng
Object Type: Article
System: The UNT Digital Library
Tissue biodistribution of intravenously administrated titanium dioxide nanoparticles revealed blood-brain barrier clearance and brain inflammation in rat (open access)

Tissue biodistribution of intravenously administrated titanium dioxide nanoparticles revealed blood-brain barrier clearance and brain inflammation in rat

This article reports time-related responses from single-dose intravenous administration of 1 mg/kg Ti₂ NPs to rats, with particular emphasis on titanium quantification in the brain.
Date: September 4, 2015
Creator: Disdier, Clémence; Devoy, Jérôme; Cosnefroy, Anne; Chalansonnet, Monique; Herlin-Boime, Nathalie; Brun, Emilie et al.
Object Type: Article
System: The UNT Digital Library
Validation of a Non-Targeted LC-MS Approach for Identifying Ancient Proteins: Method Development on Bone to Improve Artifact Residue Analysis (open access)

Validation of a Non-Targeted LC-MS Approach for Identifying Ancient Proteins: Method Development on Bone to Improve Artifact Residue Analysis

This article discusses validation of the potential of an extraction and characterization approach via application to ancient bone proteins, as part of a larger method-development project for innovation and improvement of liquid chromatography - mass spectrometry analysis of protein residues from cooking pottery.
Date: September 4, 2015
Creator: Barker, Andrew; Dombrosky, Jonathan; Chaput, Dale; Venables, Barney J.; Wolverton, Steven J. & Stevens, Stanley M.
Object Type: Article
System: The UNT Digital Library
Lipidomic Analysis of Endocannabinoid Signaling: Targeted Metabolite Identification and Quantification (open access)

Lipidomic Analysis of Endocannabinoid Signaling: Targeted Metabolite Identification and Quantification

This article reviews several methodologies to quantify endocannabinoids in various biological systems.
Date: September 9, 2015
Creator: Keereetaweep, Jantana & Chapman, Kent D.
Object Type: Article
System: The UNT Digital Library
Computational inference of the structure and regulation of the lignin pathway in Panicum virgatum (open access)

Computational inference of the structure and regulation of the lignin pathway in Panicum virgatum

This article uses a systems biological modeling approach to address the challenge of in vivo measurements to elucidate the structure and regulation of the lignin pathway through a computational characterization of alternate candidate topologies.
Date: September 17, 2015
Creator: Faraji, Mojdeh; Fonseca, Luis L.; Escamilla-Treviño, Luis; Dixon, R. A. & Voit, Eberhard O.
Object Type: Article
System: The UNT Digital Library
Ultra-Fast Alterations in mRNA Levels Uncover Multiple Players in Light Stress Acclimation in Plants (open access)

Ultra-Fast Alterations in mRNA Levels Uncover Multiple Players in Light Stress Acclimation in Plants

This article contains RNA sequencing analysis of Arabidopsis thaliana plants subjected to light stress in order to identify and characterize rapid changes in the steady-state level of different transcripts in response to light stress.
Date: September 26, 2015
Creator: Suzuki, Nobuhiro; Devireddy, Amith R.; Inupakutika, Madhuri A.; Baxter, Aaron; Miller, Gad; Song, Luhua et al.
Object Type: Article
System: The UNT Digital Library
Complete Genome Sequence of a Cyanotroph, Pseudomonas fluorescens NCIMB 11764, Employing Single-Molecule Real-Time Technology (open access)

Complete Genome Sequence of a Cyanotroph, Pseudomonas fluorescens NCIMB 11764, Employing Single-Molecule Real-Time Technology

This article reports the application of single-molecule real-time sequencing for determining the entire genome structure of the cyanotroph Pseudomonas fluorescens NCIMB 11764.
Date: October 1, 2015
Creator: Jones, Lauren B. & Kunz, Daniel A.
Object Type: Article
System: The UNT Digital Library