Executive Order 13514: Federal Leadership in Environmental, Energy, and Economic Performance; Comprehensive Federal Fleet Management Handbook, June 2010, Federal Energy Management Program (FEMP) (open access)

Executive Order 13514: Federal Leadership in Environmental, Energy, and Economic Performance; Comprehensive Federal Fleet Management Handbook, June 2010, Federal Energy Management Program (FEMP)

Comprehensive Federal fleet management guide offered as a companion to Executive Order 13514 Section 12 guidance.
Date: June 1, 2010
Creator: unknown
System: The UNT Digital Library
Wind Power: How Much, How Soon, and At What Cost? (open access)

Wind Power: How Much, How Soon, and At What Cost?

The global wind power market has been growing at a phenomenal pace, driven by favorable policies towards renewable energy and the improving economics of wind projects. On a going forward basis, utility-scale wind power offers the potential for significant reductions in the carbon footprint of the electricity sector. Specifically, the global wind resource is vast and, though accessing this potential is not costless or lacking in barriers, wind power can be developed at scale in the near to medium term at what promises to be an acceptable cost.
Date: January 1, 2010
Creator: Wiser, Ryan H & Hand, Maureen
System: The UNT Digital Library
Chapter 11. Community analysis-based methods (open access)

Chapter 11. Community analysis-based methods

Microbial communities are each a composite of populations whose presence and relative abundance in water or other environmental samples are a direct manifestation of environmental conditions, including the introduction of microbe-rich fecal material and factors promoting persistence of the microbes therein. As shown by culture-independent methods, different animal-host fecal microbial communities appear distinctive, suggesting that their community profiles can be used to differentiate fecal samples and to potentially reveal the presence of host fecal material in environmental waters. Cross-comparisons of microbial communities from different hosts also reveal relative abundances of genetic groups that can be used to distinguish sources. In increasing order of their information richness, several community analysis methods hold promise for MST applications: phospholipid fatty acid (PLFA) analysis, denaturing gradient gel electrophoresis (DGGE), terminal restriction fragment length polymorphism (TRFLP), cloning/sequencing, and PhyloChip. Specific case studies involving TRFLP and PhyloChip approaches demonstrate the ability of community-based analyses of contaminated waters to confirm a diagnosis of water quality based on host-specific marker(s). The success of community-based MST for comprehensively confirming fecal sources relies extensively upon using appropriate multivariate statistical approaches. While community-based MST is still under evaluation and development as a primary diagnostic tool, results presented herein demonstrate its promise. …
Date: May 1, 2010
Creator: Cao, Y.; Wu, C. H.; Andersen, G. L. & Holden, P. A.
System: The UNT Digital Library
Tumor Engineering: The Other Face of Tissue Engineering (open access)

Tumor Engineering: The Other Face of Tissue Engineering

Advances in tissue engineering have been accomplished for years by employing biomimetic strategies to provide cells with aspects of their original microenvironment necessary to reconstitute a unit of both form and function for a given tissue.We believe that the most critical hallmark of cancer is loss of integration of architecture and function; thus, it stands to reason that similar strategies could be employed to understand tumor biology. In this commentary, we discuss work contributed by Fischbach-Teschl and colleagues to this special issue of Tissue Engineering in the context of 'tumor engineering', that is, the construction of complex cell culture models that recapitulate aspects of the in vivo tumor microenvironment to study the dynamics of tumor development, progression, and therapy on multiple scales. We provide examples of fundamental questions that could be answered by developing such models, and encourage the continued collaboration between physical scientists and life scientists not only for regenerative purposes, but also to unravel the complexity that is the tumor microenvironment. In 1993, Vacanti and Langer cast a spotlight on the growing gap between patients in need of organ transplants and the amount of available donor organs; they reaffirmed that tissue engineering could eventually address this problem by …
Date: March 9, 2010
Creator: Ghajar, Cyrus M & Bissell, Mina J
System: The UNT Digital Library
Conservation Laws for Coupled Hydro-mechanical Processes in Unsaturated Porous Media: Theory and Implementation (open access)

Conservation Laws for Coupled Hydro-mechanical Processes in Unsaturated Porous Media: Theory and Implementation

We develop conservation laws for coupled hydro-mechanical processes in unsaturated porous media using three-phase continuum mixture theory. From the first law of thermodynamics, we identify energy-conjugate variables for constitutive modeling at macroscopic scale. Energy conjugate expressions identified relate a certain measure of effective stress to the deformation of the solid matrix, the degree of saturation to the matrix suction, the pressure in each constituent phase to the corresponding intrinsic volume change of this phase, and the seepage forces to the corresponding pressure gradients. We then develop strong and weak forms of boundary-value problems relevant for 3D finite element modeling of coupled hydro-mechanical processes in unsaturated porous media. The paper highlights a 3D numerical example illustrating the advances in the solution of large-scale coupled finite element systems, as well as the challenges in developing more predictive tools satisfying the basic conservation laws and the observed constitutive responses for unsaturated porous materials.
Date: February 19, 2010
Creator: Borja, R. I. & White, J. A.
System: The UNT Digital Library
Single Ion Implantation and Deterministic Doping (open access)

Single Ion Implantation and Deterministic Doping

The presence of single atoms, e.g. dopant atoms, in sub-100 nm scale electronic devices can affect the device characteristics, such as the threshold voltage of transistors, or the sub-threshold currents. Fluctuations of the number of dopant atoms thus poses a complication for transistor scaling. In a complementary view, new opportunities emerge when novel functionality can be implemented in devices deterministically doped with single atoms. The grand price of the latter might be a large scale quantum computer, where quantum bits (qubits) are encoded e.g. in the spin states of electrons and nuclei of single dopant atoms in silicon, or in color centers in diamond. Both the possible detrimental effects of dopant fluctuations and single atom device ideas motivate the development of reliable single atom doping techniques which are the subject of this chapter. Single atom doping can be approached with top down and bottom up techniques. Top down refers to the placement of dopant atoms into a more or less structured matrix environment, like a transistor in silicon. Bottom up refers to approaches to introduce single dopant atoms during the growth of the host matrix e.g. by directed self-assembly and scanning probe assisted lithography. Bottom up approaches are discussed in …
Date: June 11, 2010
Creator: Schenkel, Thomas
System: The UNT Digital Library
Automated detection and analysis of particle beams in laser-plasma accelerator simulations (open access)

Automated detection and analysis of particle beams in laser-plasma accelerator simulations

Numerical simulations of laser-plasma wakefield (particle) accelerators model the acceleration of electrons trapped in plasma oscillations (wakes) left behind when an intense laser pulse propagates through the plasma. The goal of these simulations is to better understand the process involved in plasma wake generation and how electrons are trapped and accelerated by the wake. Understanding of such accelerators, and their development, offer high accelerating gradients, potentially reducing size and cost of new accelerators. One operating regime of interest is where a trapped subset of electrons loads the wake and forms an isolated group of accelerated particles with low spread in momentum and position, desirable characteristics for many applications. The electrons trapped in the wake may be accelerated to high energies, the plasma gradient in the wake reaching up to a gigaelectronvolt per centimeter. High-energy electron accelerators power intense X-ray radiation to terahertz sources, and are used in many applications including medical radiotherapy and imaging. To extract information from the simulation about the quality of the beam, a typical approach is to examine plots of the entire dataset, visually determining the adequate parameters necessary to select a subset of particles, which is then further analyzed. This procedure requires laborious examination of …
Date: May 21, 2010
Creator: Ushizima, Daniela Mayumi; Geddes, Cameron G.; Cormier-Michel, Estelle; Bethel, E. Wes; Jacobsen, Janet; Prabhat et al.
System: The UNT Digital Library
CHAPTER 5-RADIOACTIVE WASTE MANAGEMENT (open access)

CHAPTER 5-RADIOACTIVE WASTE MANAGEMENT

The ore pitchblende was discovered in the 1750's near Joachimstal in what is now the Czech Republic. Used as a colorant in glazes, uranium was identified in 1789 as the active ingredient by chemist Martin Klaproth. In 1896, French physicist Henri Becquerel studied uranium minerals as part of his investigations into the phenomenon of fluorescence. He discovered a strange energy emanating from the material which he dubbed 'rayons uranique.' Unable to explain the origins of this energy, he set the problem aside. About two years later, a young Polish graduate student was looking for a project for her dissertation. Marie Sklodowska Curie, working with her husband Pierre, picked up on Becquerel's work and, in the course of seeking out more information on uranium, discovered two new elements (polonium and radium) which exhibited the same phenomenon, but were even more powerful. The Curies recognized the energy, which they now called 'radioactivity,' as something very new, requiring a new interpretation, new science. This discovery led to what some view as the 'golden age of nuclear science' (1895-1945) when countries throughout Europe devoted large resources to understand the properties and potential of this material. By World War II, the potential to harness this …
Date: May 5, 2010
Creator: Marra, J.
System: The UNT Digital Library
Quality Assessment of Retinal Fundus Images using Elliptical Local Vessel Density (open access)

Quality Assessment of Retinal Fundus Images using Elliptical Local Vessel Density

Diabetic retinopathy is the leading cause of blindness in the Western world. The World Health Organisation estimates that 135 million people have diabetes mellitus worldwide and that the number of people with diabetes will increase to 300 million by the year 2025 (Amos et al., 1997). Timely detection and treatment for DR prevents severe visual loss in more than 50% of the patients (ETDRS, 1991). Through computer simulations is possible to demonstrate that prevention and treatment are relatively inexpensive if compared to the health care and rehabilitation costs incurred by visual loss or blindness (Javitt et al., 1994). The shortage of ophthalmologists and the continuous increase of the diabetic population limits the screening capability for effective timing of sight-saving treatment of typical manual methods. Therefore, an automatic or semi-automatic system able to detect various type of retinopathy is a vital necessity to save many sight-years in the population. According to Luzio et al. (2004) the preferred way to detect diseases such as diabetic retinopathy is digital fundus camera imaging. This allows the image to be enhanced, stored and retrieved more easily than film. In addition, images may be transferred electronically to other sites where a retinal specialist or an automated …
Date: January 1, 2010
Creator: Giancardo, Luca; Meriaudeau, Fabrice; Karnowski, Thomas Paul; Chaum, Edward & Tobin Jr, Kenneth William
System: The UNT Digital Library
Development of Glass Matrices for HLW Radioactive Wastes (open access)

Development of Glass Matrices for HLW Radioactive Wastes

Vitrification is currently the most widely used technology for the treatment of high level radioactive wastes (HLW) throughout the world. Most of the nations that have generated HLW are immobilizing in either borosilicate glass or phosphate glass. One of the primary reasons that glass has become the most widely used immobilization media is the relative simplicity of the vitrification process, e.g. melt waste plus glass forming frit additives and cast. A second reason that glass has become widely used for HLW is that the short range order (SRO) and medium range order (MRO) found in glass atomistically bonds the radionuclides and governs the melt properties such as viscosity, resistivity, sulphate solubility. The molecular structure of glass controls contaminant/radionuclide release by establishing the distribution of ion exchange sites, hydrolysis sites, and the access of water to those sites. The molecular structure is flexible and hence accounts for the flexibility of glass formulations to waste variability. Nuclear waste glasses melt between 1050-1150 C which minimizes the volatility of radioactive components such as Tc{sup 99}, Cs{sup 137}, and I{sup 129}. Nuclear waste glasses have good long term stability including irradiation resistance. Process control models based on the molecular structure of glass have been …
Date: March 18, 2010
Creator: Jantzen, Carol M.
System: The UNT Digital Library
Establishing Natural Product Content with the Natural Radiocarbon Signature (open access)

Establishing Natural Product Content with the Natural Radiocarbon Signature

None
Date: May 7, 2010
Creator: Buchholz, B. A.; Sarachine, M. J. & Zermeno, P.
System: The UNT Digital Library
HRTEM Study of Oxide Nanoparticles in Fe-16Cr ODS Ferritic Steel Developed for Fusion Energy (open access)

HRTEM Study of Oxide Nanoparticles in Fe-16Cr ODS Ferritic Steel Developed for Fusion Energy

None
Date: June 24, 2010
Creator: Hsiung, L. L.
System: The UNT Digital Library
Empowering Minority Communities with Health Information - WSSU (open access)

Empowering Minority Communities with Health Information - WSSU

Environmental health focus with training conducted as part of the United Negro College Fund Special Programs Corporation/National Library of Medicine HBCU ACCESS Project at Winston-Salem State University, NC on November 10, 2010.
Date: November 10, 2010
Creator: McMurray, L. and W. Templin-Branner
System: The UNT Digital Library
Metabolic Design and Control for Production in Prokaryotes (open access)

Metabolic Design and Control for Production in Prokaryotes

Prokaryotic life on earth is manifested by its diversity and omnipresence. These microbes serve as natural sources of a large variety of compounds with the potential to serve the ever growing, medicinal, chemical and transportation needs of the human population. However, commercially viable production of these compounds can be realized only through significant improvement of the native production capacity of natural isolates. The most favorable way to achieve this goal is through the genetic manipulation of metabolic pathways that direct the production of these molecules. While random mutagenesis and screening have dominated the industrial production of such compounds in the past our increased understanding of microbial physiology over the last five decades has shifted this trend towards rational approaches for metabolic design. Major drivers of this trend include recombinant DNA technology, high throughput characterization of macromolecular cellular components, quantitative modeling for metabolic engine ring, targeted combinatorial engineering and synthetic biology. In this chapter we track the evolution of microbial engineering technologies from the black box era of random mutagenesis to the science and engineering-driven era of metabolic design.
Date: November 10, 2010
Creator: Chhabra, Swapnil R. & Keasling, J.D.
System: The UNT Digital Library
TOXNET and Beyond: Using the National Library of Medicine's Environmental Health and Toxicology Portal (open access)

TOXNET and Beyond: Using the National Library of Medicine's Environmental Health and Toxicology Portal

The National Library of Medicine's Environmental Health and Toxicology Portal provides access to numerous databases that can help you explore environmental chemicals and risks. TOXNET and Beyond: Using NLM's Environmental Health and Toxicology Portal conveys the fundamentals of searching the NLM's TOXNET system of databases in chemistry, toxicology, environmental health, and related fields. In addition to TOXNET, the course will highlight various resources available through the Environmental Health and Toxicology Portal.
Date: October 20, 2010
Creator: Templin-Branner, W.
System: The UNT Digital Library
HIV-AIDS Information Resources from the NLM - ACIO (open access)

HIV-AIDS Information Resources from the NLM - ACIO

As the treatment and management of HIV/AIDS continues to evolve with new scientific breakthroughs, treatment discoveries, and management challenges, it is difficult for people living with HIV/AIDS and those who care for them to keep up with the latest information on HIV/AIDS screening and testing, prevention, treatment, and research. The National Library of Medicine (NLM), of the National Institutes of Health, has a wealth of health information resources freely available on the Internet to address these needs.
Date: October 1, 2010
Creator: Templin-Branner, W.
System: The UNT Digital Library
Hydrogeophysics (open access)

Hydrogeophysics

Developing a predictive understanding of subsurface flow and transport is complicated by the disparity of scales across which controlling hydrological properties and processes span. Conventional techniques for characterizing hydrogeological properties (such as pumping, slug, and flowmeter tests) typically rely on borehole access to the subsurface. Because their spatial extent is commonly limited to the vicinity near the wellbores, these methods often can not provide sufficient information to describe key controls on subsurface flow and transport. The field of hydrogeophysics has evolved in recent years to explore the potential that geophysical methods hold for improving the quantification of subsurface properties and processes relevant for hydrological investigations. This chapter is intended to familiarize hydrogeologists and water resource professionals with the state-of-the-art as well as existing challenges associated with hydrogeophysics. We provide a review of the key components of hydrogeophysical studies, which include: geophysical methods commonly used for shallow subsurface characterization; petrophysical relationships used to link the geophysical properties to hydrological properties and state variables; and estimation or inversion methods used to integrate hydrological and geophysical measurements in a consistent manner. We demonstrate the use of these different geophysical methods, petrophysical relationships, and estimation approaches through several field-scale case studies. Among other applications, …
Date: April 1, 2010
Creator: Hubbard, S. S. & Linde, N.
System: The UNT Digital Library
Laser Interactions in Nanomaterials Synthesis (open access)

Laser Interactions in Nanomaterials Synthesis

Laser interactions with materials have unique advantages to explore the rapid synthesis, processing, and in situ characterization of high quality and novel nanoparticles, nanotubes and nanowires. For example, laser vaporization of solids into background gases provides a wide range of processing conditions for the formation of nanomaterials by both catalyst-free and catalyst-assisted growth processes. Laser interactions with the growing nanomaterials provide remote in situ characterization of their size, structure, and composition with unprecedented temporal resolution. In this article, laser interactions involved in the synthesis of primarily carbon nanostructures are reviewed, including the catalyst-free synthesis of single-walled carbon nanohorns and quantum dots, to the catalyst-assisted growth of single and multi-walled carbon nanotubes.
Date: January 1, 2010
Creator: Geohegan, David B.; Puretzky, Alexander A.; Rouleau, Christopher M.; Jackson, Jeremy Joseph; Eres, Gyula; Xiao, Kai et al.
System: The UNT Digital Library
Zinc Transporter YiiP Escherichia coli (open access)

Zinc Transporter YiiP Escherichia coli

None
Date: March 26, 2010
Creator: Fu, D.
System: The UNT Digital Library
Empowering Minority Communities with Health Information - UDC (open access)

Empowering Minority Communities with Health Information - UDC

Training update with Environmental a health focus. Training conducted as part of the United Negro College Fund Special Programs Corporation/National Library of Medicine - HBCU ACCESS Project at the University of the District of Columbia, Washington, DC on November 2, 2010.
Date: November 2, 2010
Creator: McMurray, L.; Foster, R. & Womble, and R.
System: The UNT Digital Library
Understanding enzyme catalysis using computer simulation (open access)

Understanding enzyme catalysis using computer simulation

Enzymes catalyze biochemical reactions with remarkable specificity and efficiency, usually under physiological conditions. Computer simulation is a powerful tool for understanding enzyme catalytic mechanisms, particularly in cases where standard experimental techniques may be of limited utility. Here, we present an overview of the application of computer simulation techniques to understanding enzyme catalytic mechanisms. Examples using quantum chemical methods, as well as combined quantum mechanical/classical mechanical approaches, are provided.
Date: January 1, 2010
Creator: Parks, Jerry M; Imhof, Petra & Smith, Jeremy C
System: The UNT Digital Library
TOXNET and Beyond - Using the NLMs Environmental Health and Toxicology Portal-February (open access)

TOXNET and Beyond - Using the NLMs Environmental Health and Toxicology Portal-February

The purpose of this training is to familiarize participants with reliable online environmental health and toxicology information, from the National Library of Medicine and other reliable sources. Skills and knowledge acquired in this training class will enable participants to access, utilize, and refer others to environmental health and toxicology information.
Date: February 24, 2010
Creator: Templin-Branner, W.
System: The UNT Digital Library
National Library of Medicine Web Resources for Student Health Professionals (open access)

National Library of Medicine Web Resources for Student Health Professionals

Familiarize students affiliated with the Student National Medical Association with the National Library of Medicine's online resources that address medical conditions, health disparities, and public health preparedness needs.
Date: April 2, 2010
Creator: Womble, R.
System: The UNT Digital Library
The Gut Microbiota: Ecology and Function (open access)

The Gut Microbiota: Ecology and Function

The gastrointestinal (GI) tract is teeming with an extremely abundant and diverse microbial community. The members of this community have coevolved along with their hosts over millennia. Until recently, the gut ecosystem was viewed as black box with little knowledge of who or what was there or their specific functions. Over the past decade, however, this ecosystem has become one of fastest growing research areas of focus in microbial ecology and human and animal physiology. This increased interest is largely in response to studies tying microbes in the gut to important diseases afflicting modern society, including obesity, allergies, inflammatory bowel diseases, and diabetes. Although the importance of a resident community of microorganisms in health was first hypothesized by Pasteur over a century ago (Sears, 2005), the multiplicity of physiological changes induced by commensal bacteria has only recently been recognized (Hooper et al., 2001). The term 'ecological development' was recently coined to support the idea that development of the GI tract is a product of the genetics of the host and the host's interactions with resident microbes (Hooper, 2004). The search for new therapeutic targets and disease biomarkers has escalated the need to understand the identities and functions of the microorganisms …
Date: June 1, 2010
Creator: Willing, B.P. & Jansson, J.K.
System: The UNT Digital Library