New insights into potential functions for the protein 4.1superfamily of proteins in kidney epithelium (open access)

New insights into potential functions for the protein 4.1superfamily of proteins in kidney epithelium

Members of the protein 4.1 family of adapter proteins are expressed in a broad panel of tissues including various epithelia where they likely play an important role in maintenance of cell architecture and polarity and in control of cell proliferation. We have recently characterized the structure and distribution of three members of the protein 4.1 family, 4.1B, 4.1R and 4.1N, in mouse kidney. We describe here binding partners for renal 4.1 proteins, identified through the screening of a rat kidney yeast two-hybrid system cDNA library. The identification of putative protein 4.1-based complexes enables us to envision potential functions for 4.1 proteins in kidney: organization of signaling complexes, response to osmotic stress, protein trafficking, and control of cell proliferation. We discuss the relevance of these protein 4.1-based interactions in kidney physio-pathology in the context of their previously identified functions in other cells and tissues. Specifically, we will focus on renal 4.1 protein interactions with beta amyloid precursor protein (beta-APP), 14-3-3 proteins, and the cell swelling-activated chloride channel pICln. We also discuss the functional relevance of another member of the protein 4.1 superfamily, ezrin, in kidney physiopathology.
Date: June 17, 2005
Creator: Calinisan, Venice; Gravem, Dana; Chen, Ray Ping-Hsu; Brittin,Sachi; Mohandas, Narla; Lecomte, Marie-Christine et al.
Object Type: Article
System: The UNT Digital Library
Final Construction and Testing of an Experimental Sprinkler/Groundwater Treatment System for Proposed Use by the Village of Utica, Nebraska. (open access)

Final Construction and Testing of an Experimental Sprinkler/Groundwater Treatment System for Proposed Use by the Village of Utica, Nebraska.

The testing described above demonstrates that the experimental sprinkler designed by Argonne could be successfully, and safely, used by the Village of Utica for irrigation of the town's playing fields, using contaminated (by carbon tetrachloride) groundwater from the shallow aquifer beneath the town. Routine operation of the sprinkler within the range of parameters identified by the testing program would effectively reduce carbon tetrachloride concentrations in the discharged spray reaching the ground to levels below the MCL (5 {micro}g/l). CCC/USDA and Argonne propose to test use of the experimental sprinkler by the Village of Utica during the next (Summer 2001) growing season, under Argonne supervision. Water will be supplied from the well to the sprinkler drive unit using a temporary, flexible (high-pressure hose) connection. Argonne will provide training to Village staff in the setup and use of the sprinkler, and will conduct periodic monitoring (proposed biweekly, initially) of the watering operations and sampling and analysis of the spray discharge from the unit, to ensure that the specified groundwater cleanup performance of the sprinkler system (to carbon tetrachloride values <5 {micro}g/L) is maintained. If testing of the sprinkler in this manner proves successful during 2001, CCC/USDA will seek to permanently transfer ownership …
Date: June 17, 2005
Creator: unknown
Object Type: Report
System: The UNT Digital Library
Murdock, Nebraska, groundwater flow and transport modeling in support of long-term monitoring. (open access)

Murdock, Nebraska, groundwater flow and transport modeling in support of long-term monitoring.

None
Date: June 17, 2005
Creator: Shafer, J. M.
Object Type: Report
System: The UNT Digital Library
Translational Applications of Molecular Imaging and Radionuclide Therapy (open access)

Translational Applications of Molecular Imaging and Radionuclide Therapy

Molecular imaging is becoming a larger part of imaging research and practice. The Office of Biological and Environmental Research of the Department of Energy funds a significant number of researchers in this area. The proposal is to partially fund a workshop to inform scientists working in nuclear medicine and nuclear medicine practitioners of the recent advances of molecular imaging in nuclear medicine as well as other imaging modalities. A limited number of topics related to radionuclide therapy will also be discussed. The proposal is to request partial funds for the workshop entitled “Translational Applications of Molecular Imaging and Radionuclide Therapy” to be held prior to the Society of Nuclear Medicine Annual Meeting in Toronto, Canada in June 2005. The meeting will be held on June 17-18. This will allow scientists interested in all aspects of nuclear medicine imaging to attend. The chair of the organizing group is Dr. Michael J. Welch. The organizing committee consists of Dr. Welch, Dr. William C. Eckelman and Dr. David Vera. The goal is to invite speakers to discuss the most recent advances of modern molecular imaging and therapy. Speakers will present advances made in in vivo tagging imaging assays, technical aspects of small animal …
Date: June 17, 2005
Creator: Welch, Michael J.; Eckelman, William C. & Vera, David
Object Type: Article
System: The UNT Digital Library
New Tools for the site-specific attachment of proteins to surface (open access)

New Tools for the site-specific attachment of proteins to surface

Protein microarrays in which proteins are immobilized to a solid surface are ideal reagents for high-throughput experiments that require very small amounts of analyte. Such protein microarrays ('protein chips') can be used very efficiently to analyze all kind of protein interactions en masse. Although a variety of methods are available for attaching proteins on solid surfaces. Most of them rely on non-specific adsorption methods or on the reaction of chemical groups within proteins (mainly, amino and carboxylic acid groups) with complementary reactive groups. In both cases the protein is attached to the surface in random orientations. The use of recombinant affinity tags addresses the orientation issue, however in most of the cases the interaction of the tags are reversible (e.g., glutathione S-transferase, maltose binding protein and poly-His) and, hence, are not stable over the course of subsequent assays or require large mediator proteins (e.g., biotin-avidin and antigen antibody). The key for the covalent attachment of a protein to a solid support with a total control over the orientation is to introduce two unique and mutually reactive groups on both the protein and the surface. The reaction between these two groups should be highly selective thus behaving like a molecular 'Velcro'.
Date: June 17, 2005
Creator: Camarero, J A; Kwon, Y & Coleman, M A
Object Type: Article
System: The UNT Digital Library
DYNAMICAL ANALYSIS OF HIGHLY EXCITED MOLECULAR SPECTRA (open access)

DYNAMICAL ANALYSIS OF HIGHLY EXCITED MOLECULAR SPECTRA

Spectra and internal dynamics of highly excited molecules are essential to understanding processes of fundamental importance for combustion, including intramolecular energy transfer and isomerization reactions. The goal of our program is to develop new theoretical tools to unravel information about intramolecular dynamics encoded in highly excited experimental spectra. We want to understand the formations of ''new vibrational modes'' when the ordinary normal modes picture breaks down in highly excited vibrations. We use bifurcation analysis of semiclassical versions of the effective Hamiltonians used by spectroscopists to fit complex experimental spectra. Specific molecular systems are of interest for their relevance to combustion and the availability of high-quality experimental data. Because of its immense importance in combustion, the isomerizing acetylene/vinylidene system has been the object of long-standing experimental and theoretical research. We have made significant progress in systematically understanding the bending dynamics of the acetylene system. We have begun to make progress on extending our methodology to the full bend-stretch vibrational degrees of freedom, including dynamics with multiple wells and above barrier motion, and time-dependent dynamics. For this, development of our previous methods using spectroscopic fitting Hamiltonians is needed, for example, for systems with multiple barriers.
Date: June 17, 2005
Creator: Kellman, Michael E.
Object Type: Report
System: The UNT Digital Library
Noncontacting thermoelectric detection of material imperfections in metals (open access)

Noncontacting thermoelectric detection of material imperfections in metals

This project was aimed at developing a new noncontacting thermoelectric method for nondestructive detection of material imperfections in metals. The method is based on magnetic sensing of local thermoelectric currents around imperfections when a temperature gradient is established throughout a conducting specimen by external heating and cooling. The surrounding intact material serves as the reference electrode therefore the detection sensitivity could be very high if a sufficiently sensitive magnetometer is used in the measurements. This self-referencing, noncontacting, nondestructive inspection technique offers the following distinct advantages over conventional methods: high sensitivity to subtle variations in material properties, unique insensitivity to the size, shape, and other geometrical features of the specimen, noncontacting nature with a substantial stand-off distance, and the ability to probe relatively deep into the material. The potential applications of this method cover a very wide range from detection metallic inclusions and segregations, inhomogeneities, and tight cracks to characterization of hardening, embrittlement, fatigue, texture, and residual stresses.
Date: June 17, 2005
Creator: Nagy, Peter B.; Nayfeh, Adnan H.; Faidi, Waseem I.; Carreon, Hector; Lakshminaraya, Balachander; Yu, Feng et al.
Object Type: Report
System: The UNT Digital Library
Improved Fluid handling Components for High Wear Applications in the Mining Industry (open access)

Improved Fluid handling Components for High Wear Applications in the Mining Industry

None
Date: June 17, 2005
Creator: Knittel, Kenneth L.
Object Type: Report
System: The UNT Digital Library
Statistical Analysis of the Critical Mass Laboratory (209-E) Filter Data (open access)

Statistical Analysis of the Critical Mass Laboratory (209-E) Filter Data

The potential-to-emit (PTE) calculation for the Critical Mass Laboratory (209-E) exhaust stack, which was developed around 1992, was questioned by the Washington Department of Health (WDOH). WDOH issued a notice of assurance of discontinuance and a commitment was made in the subsequent reply to develop a new PTE. Samples were obtained from the pre-filters and the first bank of HEPA filters in the 209-E exhaust system and analyzed per the sampling and analysis plan (LeBaron 2005). The sample information from the exhaust pre-filters and the first bank of HEPA filters provided in Table 5 will be used to develop a PTE. If the PTE shows that the stack emissions are greater than 0.1 mrem/year, the stack will be designated as a major stack. If the PTE shows that the stack emissions are less than 0.1 mrem/year, the stack will be designated as a minor stack.
Date: June 17, 2005
Creator: Welsh, Terri L.
Object Type: Report
System: The UNT Digital Library
Evaluation of Oxidation and Hydrogen Permeation of Al Containing Duplex Stainless Steels (open access)

Evaluation of Oxidation and Hydrogen Permeation of Al Containing Duplex Stainless Steels

As the National Hydrogen Economy continues to develop and evolve the need for structural materials that can resist hydrogen assisted degradation will become critical. To date austenitic stainless steel materials have been shown to be mildly susceptible to hydrogen attack which results in lower mechanical and fracture strengths. As a result, hydrogen permeation barrier coatings are typically applied to these steel to retard hydrogen ingress. The focal point of the reported work was to evaluate the potential for intentional alloying of commercial 300-series stainless steels to promote hydrogen permeation resistant oxide scales. Previous research on the Cr- and Fe-oxide scales inherent to 300-series stainless steels has proven to be inconsistent in effecting permeation resistance. The approach undertaken in this research was to add aluminum to the 300-series stainless steels in an attempt to promote a pure Al-oxide or and Al-rich oxide scale. Aloxide had been previously demonstrated to be an effective hydrogen permeation barrier. Results for 304L and 347H alloys doped with Al in concentration from 0.5-3.0 wt% with respect to oxidation kinetic studies, cyclic oxidation and characterization of the oxide scale chemistry are reported herein. Gaseous hydrogen permeation testing of the Al-doped alloys in both the unoxidized and oxidized …
Date: June 17, 2005
Creator: Adams, Thad M.; Korinko, Paul & Duncan, Andrew
Object Type: Article
System: The UNT Digital Library
FLYCHK: generalized population kinetics and spectral model for rapid spectroscopic analysis for all elements (open access)

FLYCHK: generalized population kinetics and spectral model for rapid spectroscopic analysis for all elements

FLYCHK is a straightforward, rapid tool to provide ionization and population distributions of plasmas in zero dimension with accuracy sufficient for most initial estimates and in many cases applicable for more sophisticated analysis. FLYCHK solves rate equations for level population distributions by considering collisional and radiative atomic processes. The code is designed to be straightforward to use and yet is general enough to apply for most laboratory plasmas. Further, it can be applied for low-to-high Z ions and in either steady-state or time-dependent situations. Plasmas with arbitrary electron energy distributions, single or multiple electron temperatures can be studied as well as radiation-driven plasmas. To achieve this versatility and accuracy in a code that provides rapid response we employ schematic atomic structures, scaled hydrogenic cross-sections and read-in tables. It also employs the jj configuration averaged atomic states and oscillator strengths calculated using the Dirac-Hartree-Slater model for spectrum synthesis. Numerous experimental and calculational comparisons performed in recent years show that FLYCHK provides meaningful estimates of ionization distributions, well within a charge state for most laboratory applications.
Date: June 17, 2005
Creator: Chung, H; Chen, M; Morgan, W L; Ralchenko, Y & Lee, R W
Object Type: Article
System: The UNT Digital Library
Leakage and Sepage of CO2 from Geologic Carbon SequestrationSites: CO2 Migration into Surface Water (open access)

Leakage and Sepage of CO2 from Geologic Carbon SequestrationSites: CO2 Migration into Surface Water

Geologic carbon sequestration is the capture of anthropogenic carbon dioxide (CO{sub 2}) and its storage in deep geologic formations. One of the concerns of geologic carbon sequestration is that injected CO{sub 2} may leak out of the intended storage formation, migrate to the near-surface environment, and seep out of the ground or into surface water. In this research, we investigate the process of CO{sub 2} leakage and seepage into saturated sediments and overlying surface water bodies such as rivers, lakes, wetlands, and continental shelf marine environments. Natural CO{sub 2} and CH{sub 4} fluxes are well studied and provide insight into the expected transport mechanisms and fate of seepage fluxes of similar magnitude. Also, natural CO{sub 2} and CH{sub 4} fluxes are pervasive in surface water environments at levels that may mask low-level carbon sequestration leakage and seepage. Extreme examples are the well known volcanic lakes in Cameroon where lake water supersaturated with respect to CO{sub 2} overturned and degassed with lethal effects. Standard bubble formation and hydrostatics are applicable to CO{sub 2} bubbles in surface water. Bubble-rise velocity in surface water is a function of bubble size and reaches a maximum of approximately 30 cm s{sup -1} at a bubble …
Date: June 17, 2005
Creator: Oldenburg, Curt M. & Lewicki, Jennifer L.
Object Type: Report
System: The UNT Digital Library
First Laser-Plasma Interaction and Hohlraum Experiments on NIF (open access)

First Laser-Plasma Interaction and Hohlraum Experiments on NIF

Recently the first hohlraum experiments have been performed at the National Ignition Facility (NIF) in support of indirect drive Inertial Confinement Fusion (ICF) designs. The effects of laser beam smoothing by spectral dispersion (SSD) and polarization smoothing (PS) on the beam propagation in long scale gas-filled pipes has been studied at plasma scales as found in indirect drive gas filled ignition hohlraum designs. The long scale gas-filled target experiments have shown propagation over 7 mm of dense plasma without filamentation and beam break up when using full laser smoothing. Vacuum hohlraums have been irradiated with laser powers up to 6 TW, 1-9 ns pulse lengths and energies up to 17 kJ to activate several diagnostics, to study the hohlraum radiation temperature scaling with the laser power and hohlraum size, and to make contact with hohlraum experiments performed at the NOVA and Omega laser facilities. Subsequently, novel long laser pulse hohlraum experiments have tested models of hohlraum plasma filling and long pulse hohlraum radiation production. The validity of the plasma filling assessment in analytical models and in LASNEX calculations has been proven for the first time. The comparison of these results with modeling will be discussed.
Date: June 17, 2005
Creator: Dewald, E. L.; Glenzer, S. H.; Landen, O. L.; Suter, L. J.; Jones, O. S.; Schein, J. et al.
Object Type: Article
System: The UNT Digital Library
Optimization Of Phase-Contrast Enhanced X-Ray Imaging Of D-T Layers (open access)

Optimization Of Phase-Contrast Enhanced X-Ray Imaging Of D-T Layers

Phase-contrast enhanced x-ray imaging has been demonstrated for characterization of D-T layers inside of beryllium shells. These first demonstrations used both scintillator and direct-detection imaging. This memo details tradeoffs between the two methods in order to optimize the imaging. The guiding principle for optimization is to minimize the exposure time while maximizing the signal-to-noise ratio at the D-T solid-vapor interface. Direct-detection and scintillator performance are comparable when imaging the full capsule. However, a scintillator allows for higher-resolution images necessary for studying local defects in the D-T layer.
Date: June 17, 2005
Creator: Kozioziemski, B
Object Type: Report
System: The UNT Digital Library