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Bacillus atrophaeus Outer Spore Coat Assembly and Ultrastructure (open access)

Bacillus atrophaeus Outer Spore Coat Assembly and Ultrastructure

Our previous atomic force microscopy (AFM) studies successfully visualized native Bacillus atrophaeus spore coat ultrastructure and surface morphology. We have shown that the outer spore coat surface is formed by a crystalline array of {approx}11 nm thick rodlets, having a periodicity of {approx}8 nm. We present here further AFM ultrastructural investigations of air-dried and fully hydrated spore surface architecture. In the rodlet layer, planar and point defects, as well as domain boundaries, similar to those described for inorganic and macromolecular crystals, were identified. For several Bacillus species, rodlet structure assembly and architectural variation appear to be a consequence of species-specific nucleation and crystallization mechanisms that regulate the formation of the outer spore coat. We propose a unifying mechanism for nucleation and self-assembly of this crystalline layer on the outer spore coat surface.
Date: November 21, 2005
Creator: Plomp, M; Leighton, T J; Wheeler, K E; Pitesky, M E & Malkin, A J
System: The UNT Digital Library
In-situ Studies of the Martensitic Transformation in Ti Thin Films using the Dynamic Transmission Microscope (DTEM) (open access)

In-situ Studies of the Martensitic Transformation in Ti Thin Films using the Dynamic Transmission Microscope (DTEM)

The {alpha} to {beta} transition in pure Ti occurs mainly by a 'martensitic type' phase transformation. In such transformations, growth rates and interface velocities tend to be very large, on the order of 10{sup 3} m/s, making it difficult to observe the transformation experimentally. With thin films, it becomes even more difficult to observe, since the large surface augments the nucleation and transformation rates to levels that require nanosecond temporal resolution for experimental observations. The elucidation of the transformational mechanisms in these materials yearns for an apparatus that has both high spatial and temporal resolution. We have constructed such an instrument at LLNL (the dynamical transmission electron microscope or DTEM) that combines pulsed lasers systems and optical pump-probe techniques with a conventional TEM. We have used the DTEM to observe the transient events of the {alpha}-{beta} transformation in nanocrystalline Ti films via single shot diffraction patterns with 1.5 ns resolution. With pulsed, nanosecond laser irradiation (pump laser), the films were heated at an extreme rate of 10{sup 10} K/s. was observed At 500 ns after the initial pump laser hit, the HCP, alpha phase was almost completely transformed to the BCC, beta phase. Post-mortem investigations of the laser treated films …
Date: November 21, 2005
Creator: LaGrange, T. B.; Campbell, G. H.; Colvin, J. D.; King, W. E.; Browning, N. D.; Armstrong, M. R. et al.
System: The UNT Digital Library
Naturalness and Higgs Decays in the MSSM with a Singlet (open access)

Naturalness and Higgs Decays in the MSSM with a Singlet

The simplest extension of the supersymmetric standard model--the addition of one singlet superfield--can have a profound impact on the Higgs and its decays. We perform a general operator analysis of this scenario, focusing on the phenomenologically distinct scenarios that can arise, and not restricting the scope to the narrow framework of the NMSSM. We reexamine decays to four b quarks and four {tau}'s, finding that they are still generally viable, but at the edge of LEP limits. We find a broad set of Higgs decay modes, some new, including those with four gluon final states, as well as more general six and eight parton final states. We find the phenomenology of these scenarios is dramatically impacted by operators typically ignored, specifically those arising from D-terms in the hidden sector, and those arising from weak-scale colored fields. In addition to sensitivity of m{sub z}, there are potential tunings of other aspects of the spectrum. In spite of this, these models can be very natural, with light stops and a Higgs as light as 82 GeV. These scenarios motivate further analyses of LEP data as well as studies of the detection capabilities of future colliders to the new decay channels presented.
Date: November 21, 2005
Creator: Chang, Spencer; Fox, Patrick J. & Weiner, Neal
System: The UNT Digital Library
The distribution of subsurface damage in fused silica (open access)

The distribution of subsurface damage in fused silica

Managing subsurface damage during the shaping process and removing subsurface damage during the polishing process is essential in the production of low damage density optical components, such as those required for use on high peak power lasers. Removal of subsurface damage, during the polishing process, requires polishing to a depth which is greater than the depth of the residual cracks present following the shaping process. To successfully manage, and ultimately remove subsurface damage, understanding the distribution and character of fractures in the subsurface region introduced during fabrication process is important. We have characterized the depth and morphology of subsurface fractures present following fixed abrasive and loose abrasive grinding processes. At shallow depths lateral cracks and an overlapping series of trailing indentation fractures were found to be present. At greater depths, subsurface damage consists of a series of trailing indentation fractures. The area density of trailing fractures changes as a function of depth, however the length and shape of individual cracks remain nearly constant for a given grinding process. We have developed and applied a model to interpret the depth and crack length distributions of subsurface surface damage in terms of key variables including abrasive size and load.
Date: November 21, 2005
Creator: Miller, P E; Suratwala, T I; Wong, L L; Feit, M D; Menapace, J A; Davis, P J et al.
System: The UNT Digital Library
Streaming Compression of Tetrahedral Volume Meshes (open access)

Streaming Compression of Tetrahedral Volume Meshes

Geometry processing algorithms have traditionally assumed that the input data is entirely in main memory and available for random access. This assumption does not scale to large data sets, as exhausting the physical memory typically leads to IO-inefficient thrashing. Recent works advocate processing geometry in a 'streaming' manner, where computation and output begin as soon as possible. Streaming is suitable for tasks that require only local neighbor information and batch process an entire data set. We describe a streaming compression scheme for tetrahedral volume meshes that encodes vertices and tetrahedra in the order they are written. To keep the memory footprint low, the compressor is informed when vertices are referenced for the last time (i.e. are finalized). The compression achieved depends on how coherent the input order is and how many tetrahedra are buffered for local reordering. For reasonably coherent orderings and a buffer of 10,000 tetrahedra, we achieve compression rates that are only 25 to 40 percent above the state-of-the-art, while requiring drastically less memory resources and less than half the processing time.
Date: November 21, 2005
Creator: Isenburg, M; Lindstrom, P; Gumhold, S & Shewchuk, J
System: The UNT Digital Library
Fabrication and Characterization of Graded Impedance Gas Gun Impactors from Tape Cast Metal Powders (open access)

Fabrication and Characterization of Graded Impedance Gas Gun Impactors from Tape Cast Metal Powders

Fabrication of compositionally graded structures for use as light-gas gun impactors has been demonstrated using a tape casting technique. Mixtures of metal powders in the Mg-Cu system were cast into a series of tapes with uniform compositions ranging from 100% Mg to 100% Cu. The individual compositions were fabricated into monolithic pellets for characterization by laminating multiple layers together, thermally removing the organics, and hot-pressing to near-full density. The pellets were characterized by optical and scanning electron microscopy, X-ray diffraction, and measurement of density and sound wave velocity. The density and acoustic impedance were observed to vary monotonically (and nearly linearly) with composition. Graded structures were fabricated by stacking layers of different compositions in a sequence calculated to yield a desired acoustic impedance profile. The measured physical properties of the graded structures compare favorably with those predicted from the monolithic-pellet characteristics. Fabrication of graded impactors by this technique is of significant interest for providing improved control of the pressure profile in gas gun experiments.
Date: November 21, 2005
Creator: Martin, L P & Nguyen, J H
System: The UNT Digital Library