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CaMV35S promoter – A plant biology and biotechnology workhorse in the era of synthetic biology (open access)

CaMV35S promoter – A plant biology and biotechnology workhorse in the era of synthetic biology

This review article calls for establishing the CaMV 35S promoter as a quantitative reference standard for transcription activity in plants.
Date: November 18, 2020
Creator: Amack, Stephanie C. & Antunes, Mauricio S.
Object Type: Article
System: The UNT Digital Library
Crystal structure of (3E,5E)-3,5-bis[4-(diethylazaniumyl)benzylidene]-1-methyl-4-oxopiperidin-1-ium trichloride dihydrate: a potential biophotonic material (open access)

Crystal structure of (3E,5E)-3,5-bis[4-(diethylazaniumyl)benzylidene]-1-methyl-4-oxopiperidin-1-ium trichloride dihydrate: a potential biophotonic material

This article describes the crystal structure of the title compound, and examines application as an agent for locating cancer cells with two-photon excited fluorescence as as a potential agent for a photodynamic treatment of cancer. This article includes supporting information with computing details of the study.
Date: November 4, 2015
Creator: Nesterov, Volodymyr V.; Zakharov, Lev N.; Nesterov, Vladimir N. & Shulaev, Vladimir
Object Type: Article
System: The UNT Digital Library
River Notes: A Natural and Human History of the COlorado (open access)

River Notes: A Natural and Human History of the COlorado

This article reviews the book "River Notes: A Natural and Human History of the Colorado" by Wade Davis.
Date: November 4, 2013
Creator: La Point, Thomas W., 1949-
Object Type: Review
System: The UNT Digital Library
xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features (open access)

xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

Article discussing the eXtensible Genome Data Broker (xGDB) and an open-source computational infrastructure for the integrated evaluation and anlysis of genome features.
Date: November 20, 2006
Creator: Schlueter, Shannon D.; Wilkerson, Matthew D.; Dong, Qunfeng & Brendel, Volker
Object Type: Article
System: The UNT Digital Library
A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick) (open access)

A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick)

This article involves mapping the probability of occurrence that the disease vector exists in the environment, mapping the incidence of Lyme disease in the human population and examining the spatial concordance between the probability map and incidence map.
Date: November 1, 2014
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
Object Type: Article
System: The UNT Digital Library
Modelling spatial concordance between Rocky Mountain spotted fever disease incidence and habitat probability of its vector Dermacentor variabilis (American dog tick) (open access)

Modelling spatial concordance between Rocky Mountain spotted fever disease incidence and habitat probability of its vector Dermacentor variabilis (American dog tick)

This article reports on the development and comparison of two maps of Texas related to Rocky Mountain spotted fever.
Date: November 1, 2012
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
Object Type: Article
System: The UNT Digital Library
Editorial: Biofuels and Bioenergy (open access)

Editorial: Biofuels and Bioenergy

Editorial on the research topic of biofuels and bioenergy.
Date: November 30, 2020
Creator: Barros-Rios, Jaime; Zhang, Jin & Lu, Mengzhu
Object Type: Article
System: The UNT Digital Library
Muconic acid production from methane using rationally-engineered methanotrophic biocatalysts (open access)

Muconic acid production from methane using rationally-engineered methanotrophic biocatalysts

Article demonstrates bioconversion of methane to muconic acid, a dicarboxylic acid that can be upgraded to an array of platform chemicals, by three gammaproteobacterial methanotrophs.
Date: November 25, 2019
Creator: Henard, Calvin A.; Akberdin, Ilya R.; Kalyuzhnaya, Marina G. & Guarnieri, Michael T.
Object Type: Article
System: The UNT Digital Library
Gray Wolf Exposure to Emerging Vector-Borne Diseases in Wisconsin with Comparison to Domestic Dogs and Humans (open access)

Gray Wolf Exposure to Emerging Vector-Borne Diseases in Wisconsin with Comparison to Domestic Dogs and Humans

This article contains the evaluation of temporal and geographic patterns of exposure to these four vector-borne diseases in Wisconsin as the Gray Wolf population expanded between 1985 and 2011.
Date: November 29, 2016
Creator: Jara Miller, Rocio F.; Wydeven, Adrian P. & Samuel, Michael D.
Object Type: Article
System: The UNT Digital Library
Were domestic camelids present on the prehispanic South American agricultural frontier? An ancient DNA study (open access)

Were domestic camelids present on the prehispanic South American agricultural frontier? An ancient DNA study

Article testing the hypothesis that domesticated camelids occurred in prehispanic, southern Mendoza through analysis of ancient DNA.
Date: November 5, 2020
Creator: Johnson, Jeff A.; Kim, Tracy; Wolverton, Steven J.; Gil, Adolfo Fabian; Abbona, Cinthia Carolina & Adolfo, Gustavo Neme
Object Type: Article
System: The UNT Digital Library
Co-localization of L-Phenylalanine Ammonia-Lyase and Cinnamate 4-Hydroxylase for Metabolic Channeling in Phenylpropanoid Biosynthesis (open access)

Co-localization of L-Phenylalanine Ammonia-Lyase and Cinnamate 4-Hydroxylase for Metabolic Channeling in Phenylpropanoid Biosynthesis

Article on the co-localization of L-phenylalanine ammonia-lyase and cinnamate 4-hydroxylase for metabolic channeling in phenylpropanoid biosynthesis.
Date: November 2004
Creator: Achnine, Lahoucine; Blancaflor, Elison B.; Rasmussen, Susanne & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Prebiotic/probiotic supplementation resulted in reduced visceral fat and mRNA expression associated with adipose tissue inflammation, systemic inflammation, and chronic disease risk (open access)

Prebiotic/probiotic supplementation resulted in reduced visceral fat and mRNA expression associated with adipose tissue inflammation, systemic inflammation, and chronic disease risk

Article describes how prebiotic/probiotic supplementation represents a viable option for addressing elevated systemic inflammation and chronic disease risk in overweight individuals. The key findings support that 90-day prebiotic/probiotic supplementation may be associated with reduced adipose tissue inflammation, reduced systemic inflammation, and reduced chronic disease risk.
Date: November 28, 2022
Creator: McFarlin, Brian K.; Tanner, Elizabeth A.; Hill, David W. & Vingren, Jakob L.
Object Type: Article
System: The UNT Digital Library
The protein conformational basis of isoflavone biosynthesis (open access)

The protein conformational basis of isoflavone biosynthesis

Authors of the article assert that isoflavonoids play important roles in plant defense and also exhibit a range of mammalian health-promoting activities. They emphasize that understanding the structural basis of isoflavone biosynthesis will facilitate the engineering of new bioactive isoflavonoids.
Date: November 15, 2022
Creator: Wang, Xiaoqiang; Pan, Haiyun; Sagurthi, Someswar; Paris, Vincent; Zhuo, Chunliu & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Targeted down-regulation of cytochrome P450 enzymes for forage quality improvement in alfalfa (Medicago sativa L.) (open access)

Targeted down-regulation of cytochrome P450 enzymes for forage quality improvement in alfalfa (Medicago sativa L.)

Article on targeted down-regulation of cytochrome P450 enzymes for forage quality improvement in alfalfa (Medicago sativa L.).
Date: November 15, 2005
Creator: Reddy, M. S. Srinivasa; Chen, Fang; Shadle, Gail L.; Jackson, Lisa A.; Aljoe, Hugh & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Transcriptomic profiling of miR-203a inhibitor and miR-34b-injected zebrafish (Danio rerio) validates oil-induced neurological, cardiovascular and eye toxicity response pathways (open access)

Transcriptomic profiling of miR-203a inhibitor and miR-34b-injected zebrafish (Danio rerio) validates oil-induced neurological, cardiovascular and eye toxicity response pathways

Article discusses how the global sequencing of microRNA (miRNA; miR) and integration to downstream mRNA expression profiles in early life stages (ELS) of fish following exposure to crude oil determined consistently dysregulated miRNAs regardless of the oil source or fish species. The overlay of differentially expressed miRNAs and mRNAs into in silico software determined that the key roles of these miRNAs were predicted to be involved in cardiovascular, neurological and visually-mediated pathways.
Date: November 21, 2022
Creator: Maguson, Jason T.; Leads, Rachel R.; McGruer, Victoria; Qian, Le; Tanabe, Philip; Roberts, Aaron P. et al.
Object Type: Article
System: The UNT Digital Library
Different mechanisms for phytoalexin induction by pathogen and wound signals in Medicago truncatula (open access)

Different mechanisms for phytoalexin induction by pathogen and wound signals in Medicago truncatula

Article on different mechanisms for phytoalexin induction by pathogen and wound signals in Medicago truncatula.
Date: September 13, 2007
Creator: Naoumkina, Marina A.; Farag, Mohamed A.; Sumner, Lloyd W.; Tang, Yuhong; Liu, Chang-Jun & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
The complexities of proanthocyanidin biosynthesis and its regulation in plants (open access)

The complexities of proanthocyanidin biosynthesis and its regulation in plants

Article describes how proanthocyanidins (PAs) are natural flavan-3-ol polymers that contribute protection to plants under biotic and abiotic stress, benefits to human health, and bitterness and astringency to food products. This review extends the conventional understanding with recent findings that provide new insights to address lingering questions and focus strategies for manipulating PA traits in plants.
Date: November 26, 2022
Creator: Yu, Keji; Song, Yushuang; Lin, Jinxing & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Proanthocyanidins - a final frontier in flavonoid research? (open access)

Proanthocyanidins - a final frontier in flavonoid research?

Article on proanthocyanidins -- a final frontier in flavonoid research?
Date: November 2, 2004
Creator: Dixon, R. A.; Xie, De-Yu & Sharma, Shashi B.
Object Type: Article
System: The UNT Digital Library
Accumulation of  α-Keto Acids as Essential Components in Cyanide Assimilation by Pseudomonas fluorescens NCIMB 11764 (open access)

Accumulation of α-Keto Acids as Essential Components in Cyanide Assimilation by Pseudomonas fluorescens NCIMB 11764

Article on the accumulation of α-Keto acids as essential components in cyanide assimilation by Pseudomonas fluorescens NCIMB 11764.
Date: November 1, 1998
Creator: Kunz, Daniel A.; Chen, Jui-Lin & Pan, Guangliang
Object Type: Article
System: The UNT Digital Library
Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium (open access)

Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium

This article identifies and characterizes the omega-3 fatty acid desaturase gene family in Gossypium hirsutum, with an emphasis on identifying omega-3 fatty acid desaturase involved in cold temperature adaption.
Date: November 18, 2014
Creator: Yurchenko, Olga P.; Park, Sunjung; Ilut, Daniel C.; Inmon, Jay J.; Millhollon, Jon C.; Liechty, Zach et al.
Object Type: Article
System: The UNT Digital Library
HSI2/VAL1 PHD-like domain promotes H3K27 trimethylation to repress the expression of seed maturation genes and complex transgenes in Arabidopsis seedlings (open access)

HSI2/VAL1 PHD-like domain promotes H3K27 trimethylation to repress the expression of seed maturation genes and complex transgenes in Arabidopsis seedlings

This article studies the novel mutant allele hsi2-4, isolated in a genetic screen to identify Arabidopsis mutants with consitutively elevated expression of a glutathione S-transferase F8:luciferase reporter gene in Arabidopsis.
Date: November 1, 2014
Creator: Veerappan, Vijaykumar; Chen, Naichong; Reichert, Angelika & Allen, Randy D.
Object Type: Article
System: The UNT Digital Library
Secreted Frizzled Related Proteins: Implications in Cancers (open access)

Secreted Frizzled Related Proteins: Implications in Cancers

Article on secreted frizzled related proteins and implications in cancers.
Date: November 30, 2013
Creator: Surana, Rohit; Sikka, Sakshi; Cai, Wanpei; Shin, Eun Myoung; Warrier, Sudha R.; Tan, Hong Jie Gabriel et al.
Object Type: Article
System: The UNT Digital Library
A deep transcriptomic analysis of pod development in the vanilla orchid (Vanilla planifolia) (open access)

A deep transcriptomic analysis of pod development in the vanilla orchid (Vanilla planifolia)

This research article describes very large gene sequence datasets from vanilla pods at different times of development, representing different tissue types, including the seeds, hairs, and placental and mesocarp tissues within the pod.
Date: November 7, 2014
Creator: Rao, Xiaolan; Krom, Nick; Tang, Yuhong; Widiez, Thomas; Havkin-Frenkel, Daphna; Belanger, Faith C. et al.
Object Type: Article
System: The UNT Digital Library
Key cell signaling pathways modulated by zerumbone: Role in the prevention and treatment of cancer (open access)

Key cell signaling pathways modulated by zerumbone: Role in the prevention and treatment of cancer

Article on key cell signaling pathways modulated by zerumbone and the role in the prevention and treatment of cancer.
Date: November 15, 2012
Creator: Prasannan, Remya; Kalesh, Karunakaran A.; Shanmugam, Muthu K.; Nachiyappan, Alamelu; Ramachandran, Lalitha; Nguyen, An H. et al.
Object Type: Article
System: The UNT Digital Library