Implementing a Prolog Runtime System in a language like Java which provides its own automatic memory management and safety features such as built--in index checking and array initialization requires a consistent approach to memory management based on a simple ultimate goal: minimizing total memory management time and extra space involved. The total memory management time for Jinni is made up of garbage collection time both for Java and Jinni itself. Extra space is usually requested at Jinni's garbage collection. This goal motivates us to find a simple and practical garbage collection algorithm and implementation for our Prolog engine. In this thesis we survey various algorithms already proposed and offer our own contribution to the study of garbage collection by improvements and optimizations for some classic algorithms. We implemented these algorithms based on the dynamic array algorithm for an all--dynamic Prolog engine (JINNI 2000). The comparisons of our implementations versus the originally proposed algorithm allow us to draw informative conclusions on their theoretical complexity model and their empirical effectiveness.

Elliptic curve cryptography (ECC) is an alternative to traditional techniques for public key cryptography. It offers smaller key size without sacrificing security level. Tate pairing is a bilinear map used in identity based cryptography schemes. In a typical elliptic curve cryptosystem, elliptic curve point multiplication is the most computationally expensive component. Similarly, Tate pairing is also quite computationally expensive. Therefore, it is more attractive to implement the ECC and Tate pairing using hardware than using software. The bases of both ECC and Tate pairing are Galois field arithmetic units. In this thesis, I propose the FPGA implementations of the elliptic curve point multiplication in GF (2283) as well as Tate pairing computation on supersingular elliptic curve in GF (2283). I have designed and synthesized the elliptic curve point multiplication and Tate pairing module using Xilinx's FPGA, as well as synthesized all the Galois arithmetic units used in the designs. Experimental results demonstrate that the FPGA implementation can speedup the elliptic curve point multiplication by 31.6 times compared to software based implementation. The results also demonstrate that the FPGA implementation can speedup the Tate pairing computation by 152 times compared to software based implementation.

Existing cache organization suffers from the inability to distinguish different types of localities, and non-selectively cache all data rather than making any attempt to take special advantage of the locality type. This causes unnecessary movement of data among the levels of the memory hierarchy and increases in miss ratio. In this dissertation I propose a split data cache architecture that will group memory accesses as scalar or array references according to their inherent locality and will subsequently map each group to a dedicated cache partition. In this system, because scalar and array references will no longer negatively affect each other, cache-interference is diminished, delivering better performance. Further improvement is achieved by the introduction of victim cache, prefetching, data flattening and reconfigurability to tune the array and scalar caches for specific application. The most significant contribution of my work is the introduction of novel cache architecture for embedded microprocessor platforms. My proposed cache architecture uses reconfigurability coupled with split data caches to reduce area and power consumed by cache memories while retaining performance gains. My results show excellent reductions in both memory size and memory access times, translating into reduced power consumption. Since there was a huge reduction in miss rates …

The explosive demand for multimedia and fast transmission of continuous media on wireless networks means the simultaneous existence of traffic requiring different qualities of service (QoS). In this thesis, several efficient algorithms have been developed which offer several QoS to the end-user. We first look at a request TDMA/CDMA protocol for supporting wireless multimedia traffic, where CDMA is laid over TDMA. Then we look at a hybrid push-pull algorithm for wireless networks, and present a generalized performance analysis of the proposed protocol. Some of the QoS factors considered include customer retrial rates due to user impatience and system timeouts and different levels of priority and weights for mobile hosts. We have also looked at how customer impatience and system timeouts affect the QoS provided by several queuing and scheduling schemes such as FIFO, priority, weighted fair queuing, and the application of the stretch-optimal algorithm to scheduling.

Online airline ticket booking system is one of the essential applications of E-commerce. With the development of Internet and security technology, more and more people begin to consume online, which is more convenient and personal than traditional way. The goal of this system is to make people purchase airline tickets easily. The system is written in JAVATM. Chapter 1 will introduce some basic conception of the technologies have been used in this system. Chapter 2 shows how the database and the system are designed. Chapter 3 shows the logic of the Web site. In Chapter 4 the interface of the system will be given. Chapter 5 tells the platform of this system.

This thesis presents a secure digital camera (SDC) that inserts biometric data into images found in forms of identification such as the newly proposed electronic passport. However, putting biometric data in passports makes the data vulnerable for theft, causing privacy related issues. An effective solution to combating unauthorized access such as skimming (obtaining data from the passport's owner who did not willingly submit the data) or eavesdropping (intercepting information as it moves from the chip to the reader) could be judicious use of watermarking and encryption at the source end of the biometric process in hardware like digital camera or scanners etc. To address such issues, a novel approach and its architecture in the framework of a digital camera, conceptualized as an SDC is presented. The SDC inserts biometric data into passport image with the aid of watermarking and encryption processes. The VLSI (very large scale integration) architecture of the functional units of the SDC such as watermarking and encryption unit is presented. The result of the hardware implementation of Rijndael advanced encryption standard (AES) and a discrete cosine transform (DCT) based visible and invisible watermarking algorithm is presented. The prototype chip can carry out simultaneous encryption and watermarking, which …

A local call admission control (CAC) algorithm for third generation wireless networks was designed and implemented, which allows for the simulation of network throughput for different spreading factors and various mobility scenarios. A global CAC algorithm is also implemented and used as a benchmark since it is inherently optimized; it yields the best possible performance but has an intensive computational complexity. Optimized local CAC algorithm achieves similar performance as global CAC algorithm at a fraction of the computational cost. Design of a dynamic channel assignment algorithm for IEEE 802.11 wireless systems is also presented. Channels are assigned dynamically depending on the minimal interference generated by the neighboring access points on a reference access point. Analysis of dynamic channel assignment algorithm shows an improvement by a factor of 4 over the default settings of having all access points use the same channel, resulting significantly higher network throughput.

Susceptibles-infectives-removals (SIR) and its derivatives are the classic mathematical models for the study of infectious diseases in epidemiology. In order to model and simulate epidemics of an infectious disease, a global stochastic field simulation paradigm (GSFS) is proposed, which incorporates geographic and demographic based interactions. The interaction measure between regions is a function of population density and geographical distance, and has been extended to include demographic and migratory constraints. The progression of diseases using GSFS is analyzed, and similar behavior to the SIR model is exhibited by GSFS, using the geographic information systems (GIS) gravity model for interactions. The limitations of the SIR and similar models of homogeneous population with uniform mixing are addressed by the GSFS model. The GSFS model is oriented to heterogeneous population, and can incorporate interactions based on geography, demography, environment and migration patterns. The progression of diseases can be modeled at higher levels of fidelity using the GSFS model, and facilitates optimal deployment of public health resources for prevention, control and surveillance of infectious diseases.

Hard real-time systems in robotics, space and military missions, and control devices are specified with stringent and critical time constraints. On the other hand, soft real-time applications arising from multimedia, telecommunications, Internet web services, and games are specified with more lenient constraints. Real-time systems can also be distinguished in terms of their implementation into preemptive and non-preemptive systems. In preemptive systems, tasks are often preempted by higher priority tasks. Non-preemptive systems are gaining interest for implementing soft-real applications on multithreaded platforms. In this dissertation, I propose a new algorithm that uses a two-level scheduling strategy for scheduling non-preemptive soft real-time tasks. Our goal is to improve the success ratios of the well-known earliest deadline first (EDF) approach when the load on the system is very high and to improve the overall performance in both underloaded and overloaded conditions. Our approach, known as group-EDF (gEDF), is based on dynamic grouping of tasks with deadlines that are very close to each other, and using a shortest job first (SJF) technique to schedule tasks within the group. I believe that grouping tasks dynamically with similar deadlines and utilizing secondary criteria, such as minimizing the total execution time can lead to new and more …

Wireless sensor networks are ad hoc networks of tiny battery powered sensor nodes that can organize themselves to form self-organized networks and collect information regarding temperature, light, and pressure in an area. Though the applications of sensor networks are very promising, sensor nodes are limited in their capability due to many factors. The main limitation of these battery powered nodes is energy. Sensor networks are expected to work for long periods of time once deployed and it becomes important to conserve the battery life of the nodes to extend network lifetime. This work examines non-uniform grid-based routing protocol as an effort to minimize energy consumption in the network and extend network lifetime. The entire test area is divided into non-uniformly shaped grids. Fixed source and sink nodes with unlimited energy are placed in the network. Sensor nodes with full battery life are deployed uniformly and randomly in the field. The source node floods the network with only the coordinator node active in each grid and the other nodes sleeping. The sink node traces the same route back to the source node through the same coordinators. This process continues till a coordinator node runs out of energy, when new coordinator nodes …

Traditional Public Health decision-support can benefit from the Web and social media revolution. This dissertation presents approaches to mining social media benefiting public health epidemiology. Through discovery and analysis of trends in Influenza related blogs, a correlation to Centers for Disease Control and Prevention (CDC) influenza-like-illness patient reporting at sentinel health-care providers is verified. A second approach considers personal beliefs of vaccination in social media. A vaccine for human papillomavirus (HPV) was approved by the Food and Drug Administration in May 2006. The virus is present in nearly all cervical cancers and implicated in many throat and oral cancers. Results from automatic sentiment classification of HPV vaccination beliefs are presented which will enable more accurate prediction of the vaccine's population-level impact. Two epidemic models are introduced that embody the intimate social networks related to HPV transmission. Ultimately, aggregating these methodologies with epidemic and social network modeling facilitate effective development of strategies for targeted interventions.

Many infectious diseases are spread through interactions between susceptible and infectious individuals. Keeping track of where each exposure to the disease took place, when it took place, and which individuals were involved in the exposure can give public health officials important information that they may use to formulate their interventions. Further, knowing which individuals in the population are at the highest risk of becoming infected with the disease may prove to be a useful tool for public health officials trying to curtail the spread of the disease. Epidemiological models are needed to allow epidemiologists to study the population dynamics of transmission of infectious agents and the potential impact of infectious disease control programs. While many agent-based computational epidemiological models exist in the literature, they focus on the spread of disease rather than exposure risk. These models are designed to simulate very large populations, representing individuals as agents, and using random experiments and probabilities in an attempt to more realistically guide the course of the modeled disease outbreak. The work presented in this thesis focuses on tracking exposure risk to chickenpox in an elementary school setting. This setting is chosen due to the high level of detailed information realistically available to …

Reliable communication over the noisy channel has become one of the major concerns in the field of digital wireless communications. The low density parity check codes (LDPC) has gained lot of attention recently because of their excellent error-correcting capacity. It was first proposed by Robert G. Gallager in 1960. LDPC codes belong to the class of linear block codes. Near capacity performance is achievable on a large collection of data transmission and storage.In my thesis I have focused on hardware implementation of (3, 6) - regular LDPC codes. A fully parallel decoder will require too high complexity of hardware realization. Partly parallel decoder has the advantage of effective compromise between decoding throughput and high hardware complexity. The decoding of the codeword follows the belief propagation alias probability propagation algorithm in log domain. A 9216 bit, (3, 6) regular LDPC code with code rate ½ was implemented on FPGA targeting Xilinx Virtex 4 XC4VLX80 device with package FF1148. This decoder achieves a maximum throughput of 82 Mbps. The entire model was designed in VHDL in the Xilinx ISE 9.2 environment.

Colorectal cancer is the second leading cause of cancer-related deaths behind lung cancer in the United States. Colonoscopy is the preferred screening method for detection of diseases like Colorectal Cancer. In the year 2006, American Society for Gastrointestinal Endoscopy (ASGE) and American College of Gastroenterology (ACG) issued guidelines for quality colonoscopy. The guidelines suggest that on average the withdrawal phase during a screening colonoscopy should last a minimum of 6 minutes. My aim is to classify the colonoscopy video into insertion and withdrawal phase. The problem is that currently existing shot detection techniques cannot be applied because colonoscopy is a single camera shot from start to end. An algorithm to detect phase boundary has already been developed by the MIGLAB team. Existing method has acceptable levels of accuracy but the main issue is dependency on MPEG (Moving Pictures Expert Group) 1/2. I implemented exhaustive search for motion estimation to reduce the execution time and improve the accuracy. I took advantages of the C/C++ programming languages with multithreading which helped us get even better performances in terms of execution time. I propose a method for improving the current method of colonoscopy video analysis and also an extension for the same to …

The widely used mobile phone, as well as its related technologies had opened opportunities for a complete change on how people interact and build relationship across geographic and time considerations. The convenience of instant communication by mobile phones that broke the barrier of space and time is evidently the key motivational point on why such technologies so important in people's life and daily activities. Mobile phones have become the most popular communication tools. Mobile phone technology is apparently changing our relationship to each other in our work and lives. The impact of new technologies on people's lives in social spaces gives us the chance to rethink the possibilities of technologies in social interaction. Accordingly, mobile phones are basically changing social relations in ways that are intricate to measure with any precision. In this dissertation I propose a socioscope model for social network, relationship and human behavior analysis based on mobile phone call detail records. Because of the diversities and complexities of human social behavior, one technique cannot detect different features of human social behaviors. Therefore I use multiple probability and statistical methods for quantifying social groups, relationships and communication patterns, for predicting social tie strengths and for detecting human behavior …

Researchers have speculated that global software teams have activity patterns that are dictated by work-place schedules or a client's need. Similar patterns have been suggested for individuals enrolled in distant learning projects that require students to post feedback in response to questions or assignments. Researchers tend to accept the notion that students' temporal patterns adjust to academic or social calendars and are a result of choices made within these constraints. Although there is some evidence that culture do have an impact on communication activity behavior, there is not a clear how each of these factors may relate to work done in online groups. This particular study represents a new approach to studying student-group communication activities and also pursues an alternative approach by using activity data from students participating in a global software development project to generate a variety of complex measures that capture patterns about when students work. Students work habits are also often determined by where they live and what they are working on. Moreover, students tend to work on group projects in cycles, which correspond to a start, middle, and end time period. Knowledge obtained from this study should provide insight into current empirical research on global software …

Extracting information from a stack of data is a tedious task and the scenario is no different in proteomics. Volumes of research papers are published about study of various proteins in several species, their interactions with other proteins and identification of protein(s) as possible biomarker in causing diseases. It is a challenging task for biologists to keep track of these developments manually by reading through the literatures. Several tools have been developed by computer linguists to assist identification, extraction and hypotheses generation of proteins and protein-protein interactions from biomedical publications and protein databases. However, they are confronted with the challenges of term variation, term ambiguity, access only to abstracts and inconsistencies in time-consuming manual curation of protein and protein-protein interaction repositories. This work attempts to attenuate the challenges by extracting protein-protein interactions in humans and elicit possible interactions using associative rule mining on full text, abstracts and captions from figures available from publicly available biomedical literature databases. Two such databases are used in our study: Directory of Open Access Journals (DOAJ) and PubMed Central (PMC). A corpus is built using articles based on search terms. A dataset of more than 38,000 protein-protein interactions from the Human Protein Reference Database (HPRD) …

Colonoscopy is an endoscopic technique that allows a physician to inspect the mucosa of the human colon. Previous methods and software solutions to detect informative frames in a colonoscopy video (a process called informative frame filtering or IFF) have been hugely ineffective in (1) covering the proper definition of an informative frame in the broadest sense and (2) striking an optimal balance between accuracy and speed of classification in both real-time and non real-time medical procedures. In my thesis, I propose a more effective method and faster software solutions for IFF which is more effective due to the introduction of a heuristic algorithm (derived from experimental analysis of typical colon features) for classification. It contributed to a 5-10% boost in various performance metrics for IFF. The software modules are faster due to the incorporation of sophisticated parallel-processing oriented coding techniques on modern microprocessors. Two IFF modules were created, one for post-procedure and the other for real-time. Code optimizations through NVIDIA CUDA for GPU processing and/or CPU multi-threading concepts embedded in two significant microprocessor design philosophies (multi-core design and many-core design) resulted a 5-fold acceleration for the post-procedure module and a 40-fold acceleration for the real-time module. Some innovative software modules, …

Wireless sensor networks are composed of sensor nodes, which can monitor an environment and observe events of interest. These networks are applied in various fields including but not limited to environmental, industrial and habitat monitoring. In many applications, the exact location of the sensor nodes is unknown after deployment. Localization is a process used to find sensor node's positional coordinates, which is vital information. The localization is generally assisted by anchor nodes that are also sensor nodes but with known locations. Anchor nodes generally are expensive and need to be optimally placed for effective localization. Passive localization is one of the localization techniques where the sensor nodes silently listen to the global events like thunder sounds, seismic waves, lighting, etc. According to previous studies, the ideal location to place anchor nodes was on the perimeter of the sensor network. This may not be the case in passive localization, since the function of anchor nodes here is different than the anchor nodes used in other localization systems. I do extensive studies on positioning anchor nodes for effective localization. Several simulations are run in dense and sparse networks for proper positioning of anchor nodes. I show that, for effective passive localization, the …

The major challenges facing resource constraint wireless devices are error resilience, security and speed. Three joint schemes are presented in this research which could be broadly divided into error correction based and cipher based. The error correction based ciphers take advantage of the properties of LDPC codes and Nordstrom Robinson code. A cipher-based cryptosystem is also presented in this research. The complexity of this scheme is reduced compared to conventional schemes. The securities of the ciphers are analyzed against known-plaintext and chosen-plaintext attacks and are found to be secure. Randomization test was also conducted on these schemes and the results are presented. For the proof of concept, the schemes were implemented in software and hardware and these shows a reduction in hardware usage compared to conventional schemes. As a result, joint schemes for error correction and security provide security to the physical layer of wireless communication systems, a layer in the protocol stack where currently little or no security is implemented. In this physical layer security approach, the properties of powerful error correcting codes are exploited to deliver reliability to the intended parties, high security against eavesdroppers and efficiency in communication system. The notion of a highly secure and reliable …

While pragmatics, through its integration of situational awareness and real world relevant knowledge, offers a high level of analysis that is suitable for real interpretation of natural dialogue, semantics, on the other end, represents a lower yet more tractable and affordable linguistic level of analysis using current technologies. Generally, the understanding of semantic meaning in literature has revolved around the famous quote ``You shall know a word by the company it keeps''. In this thesis we investigate the role of context constituents in decoding the semantic meaning of the engulfing context; specifically we probe the role of salient concepts, defined as content-bearing expressions which afford encyclopedic definitions, as a suitable source of semantic clues to an unambiguous interpretation of context. Furthermore, we integrate this world knowledge in building a new and robust unsupervised semantic model and apply it to entail semantic relatedness between textual pairs, whether they are words, sentences or paragraphs. Moreover, we explore the abstraction of semantics across languages and utilize our findings into building a novel multi-lingual semantic relatedness model exploiting information acquired from various languages. We demonstrate the effectiveness and the superiority of our mono-lingual and multi-lingual models through a comprehensive set of evaluations on specialized …

Conventional pattern recognition systems have two components: feature analysis and pattern classification. For any object in an image, features could be considered as the major characteristic of the object either for object recognition or object tracking purpose. Features extracted from a training image, can be used to identify the object when attempting to locate the object in a test image containing many other objects. To perform reliable scene analysis, it is important that the features extracted from the training image are detectable even under changes in image scale, noise and illumination. Scale invariant feature has wide applications such as image classification, object recognition and object tracking in the image processing area. In this thesis, color feature and SIFT (scale invariant feature transform) are considered to be scale invariant feature. The classification, recognition and tracking result were evaluated with novel evaluation criterion and compared with some existing methods. I also studied different types of scale invariant feature for the purpose of solving scene analysis problems. I propose probabilistic models as the foundation of analysis scene scenario of images. In order to differential the content of image, I develop novel algorithms for the adaptive combination for multiple features extracted from images. I …

Multi-modal image fusion is an active research area with many civilian and military applications. Fusion is defined as strategic combination of information collected by various sensors from different locations or different types in order to obtain a better understanding of an observed scene or situation. Fusion of multi-modal images cannot be completed unless these two modalities are spatially aligned. In this research, I consider two important problems. Multi-modal, multi-perspective image registration and decision level fusion of multi-modal images. In particular, LiDAR and visual imagery. Multi-modal image registration is a difficult task due to the different semantic interpretation of features extracted from each modality. This problem is decoupled into three sub-problems. The first step is identification and extraction of common features. The second step is the determination of corresponding points. The third step consists of determining the registration transformation parameters. Traditional registration methods use low level features such as lines and corners. Using these features require an extensive optimization search in order to determine the corresponding points. Many methods use global positioning systems (GPS), and a calibrated camera in order to obtain an initial estimate of the camera parameters. The advantages of our work over the previous works are the following. …

In this article, I introduce a novel airborne network mobility model, called the Smooth Turn Mobility Model, that captures the correlation of acceleration for airborne vehicles across time and spatial coordinates. E?ective routing in airborne networks (ANs) relies on suitable mobility models that capture the random movement pattern of airborne vehicles. As airborne vehicles cannot make sharp turns as easily as ground vehicles do, the widely used mobility models for Mobile Ad Hoc Networks such as Random Waypoint and Random Direction models fail. Our model is realistic in capturing the tendency of airborne vehicles toward making straight trajectory and smooth turns with large radius, and whereas is simple enough for tractable connectivity analysis and routing design.