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Genomic and Co-expression Analyses Predict Multiple Genes Involved in Triterpene Saponin Biosynthesis in Medicago truncatula (open access)

Genomic and Co-expression Analyses Predict Multiple Genes Involved in Triterpene Saponin Biosynthesis in Medicago truncatula

Article discusses genomic and coexpression analyses predicting multiple genes involved in triterpene saponin biosynthesis in Medicago truncatula.
Date: March 9, 2010
Creator: Naoumkina, Marina A.; Modolo, Luzia V.; Huhman, David; Urbanczyk-Wochniak, Ewa; Tang, Yuhong; Sumner, Lloyd W. et al.
System: The UNT Digital Library
Ursolic Acid Inhibits the Initiation, Progression of Prostate Cancer and Prolongs the Survival of TRAMP Mice by Modulating Pro-Inflammatory Pathways (open access)

Ursolic Acid Inhibits the Initiation, Progression of Prostate Cancer and Prolongs the Survival of TRAMP Mice by Modulating Pro-Inflammatory Pathways

Article on ursolic acid inhibiting the initiation, progression of prostate cancer and prolonging the survival of TRAMP mice by modulating pro-inflammatory pathways.
Date: March 12, 2012
Creator: Shanmugam, Muthu K.; Ong, Tina H.; Kumar, Alan Prem; Chang, Kai Lun; Ho, Paul C.; Wong, Peter T. H. et al.
System: The UNT Digital Library
Phylogenetic analysis of the CDGSH iron-sulfur binding domain reveals its ancient origin (open access)

Phylogenetic analysis of the CDGSH iron-sulfur binding domain reveals its ancient origin

This article reports on the origin, evolution, and diversification of the iron-sulfur (2Fe-2S) binding motif CDGSH.
Date: November 28, 2017
Creator: Sengupta, Soham; Nechushtai, Rachel; Jennings, Patricia A.; Onuchic, José N.; Padilla, Pamela A.; Azad, Rajeev K. et al.
System: The UNT Digital Library
On-Off Switches for Secondary Cell Wall Biosynthesis (open access)

On-Off Switches for Secondary Cell Wall Biosynthesis

Article discussing on-off switches for secondary cell wall biosynthesis.
Date: March 2012
Creator: Wang, Huanzhong & Dixon, R. A.
System: The UNT Digital Library
Evaluation of the RDP Classifier Accuracy Using 16S rRNA Gene Variable Regions (open access)

Evaluation of the RDP Classifier Accuracy Using 16S rRNA Gene Variable Regions

This article uses full-length 16S rRNA gene alignments from the SILVA database to simulate the PCR products of the combined variable regions.
Date: March 12, 2012
Creator: Vilo, Claudia A. & Dong, Qunfeng
System: The UNT Digital Library
Analyzing Mass Spectrometry Imaging Data of 13C-Labeled Phospholipids in Camelina sativa and Thlaspi arvense (Pennycress) Embryos (open access)

Analyzing Mass Spectrometry Imaging Data of 13C-Labeled Phospholipids in Camelina sativa and Thlaspi arvense (Pennycress) Embryos

This article uses currently available software and techniques to describe a workflow to analyze ¹³C-labeled isotopologues of the membrane lipid and storage oil lipid intermediate—phosphatidylcholine (PC). Results demonstrated greater ¹³C-isotopic labeling in the cotyledons of developing embryos compared with the embryonic axis.
Date: March 4, 2021
Creator: Romsdahl, Trevor B.; Kambhampati, Shrikaar; Koley, Somnath; Yadav, Umesh P.; Alonso, Ana Paula; Allen, Doug K. et al.
System: The UNT Digital Library
Inhibition of STAT3 dimerization and acetylation by garcinol suppresses the growth of human hepatocellular carcinoma in vitro and in vivo (open access)

Inhibition of STAT3 dimerization and acetylation by garcinol suppresses the growth of human hepatocellular carcinoma in vitro and in vivo

Article on the inhibition of STAT3 dimerization and acetylation by garcinol suppresses the growth of human hepatocellular carcinoma in vitro and in vivo.
Date: March 21, 2014
Creator: Sethi, Gautam; Chatterjee, Snehajyoti; Rajendran, Peramaiyan; Li, Feng; Shanmugam, Muthu K.; Wong, Kwong Fai et al.
System: The UNT Digital Library
NPP-16/Nup50 Function and CDK-1 Inactivation Are Associated with Anoxia-induced Prophase Arrest in Caenorhabditis elgans (open access)

NPP-16/Nup50 Function and CDK-1 Inactivation Are Associated with Anoxia-induced Prophase Arrest in Caenorhabditis elgans

Article discussing how NPP-16/Nup50 function and CDK-1 inactivation are associated with anoxia-induced prophase arrest in Caenorhabditis elegans.
Date: March 1, 2010
Creator: Hajeri, Vinita A.; Little, Brent A.; Ladage, Mary L. & Padilla, Pamela A.
System: The UNT Digital Library
The yeast lipin orthologue Pah1p is important for biogenesis of lipid droplets (open access)

The yeast lipin orthologue Pah1p is important for biogenesis of lipid droplets

Article on yeast lipin orthologue Pah1p and its importance for biogenesis of lipid droplets.
Date: March 21, 2011
Creator: Adeyo, Oludotun; Horn, Patrick J.; Lee, SungKyung; Binns, Derk Douglas; Chandrahas, Anita; Chapman, Kent D. et al.
System: The UNT Digital Library
The membrane pacemaker hypothesis: novel tests during the ontogeny of endothermy (open access)

The membrane pacemaker hypothesis: novel tests during the ontogeny of endothermy

Article explores the ‘membrane pacemaker’ hypothesis which proposes a biochemical explanation for among-species variation in resting metabolism, based on the positive correlation between membrane docosahexaenoic acid (DHA) and metabolic rate. The authors tested this hypothesis using a novel model, altricial red-winged blackbird nestlings, predicting that the proportion of DHA in muscle and liver membranes should increase with the increasing metabolic rate of the nestling as it develops endothermy. In support of the membrane pacemaker hypothesis, DHA proportions increased in membranes from pectoralis muscle, muscle mitochondria and liver during post-hatch development. By contrast, elevated dietary DHA had no effect on resting metabolic rate, despite causing significant changes to membrane lipid composition.
Date: March 29, 2018
Creator: Price, Edwin R.; Sirsat, Tushar S.; Sirsat, Sarah K. G.; Curran, Thomas; Venables, Barney J. & Dzialowski, Edward M. (Edward Michael)
System: The UNT Digital Library
MtGSTF7, a TT19-like GST gene, is essential for accumulation of anthocyanins, but not proanthocyanins in Medicago truncatula (open access)

MtGSTF7, a TT19-like GST gene, is essential for accumulation of anthocyanins, but not proanthocyanins in Medicago truncatula

Article shows that the mechanism of anthocyanin and proanthocyanin (PA) accumulation in M. truncatula is different from that in A. thaliana, and provides a new target gene for engineering anthocyanins in plants.
Date: March 16, 2022
Creator: Wang, Ruoruo; Lu, Nan; Liu, Chenggang; Dixon, R. A.; Wu, Qing; Mao, Yawen et al.
System: The UNT Digital Library
Structural analysis of a plant fatty acid amide hydrolase provides insights into the evolutionary diversity of bioactive acylethanolamides (open access)

Structural analysis of a plant fatty acid amide hydrolase provides insights into the evolutionary diversity of bioactive acylethanolamides

Article reporting the three-dimensional crystal structures of the signal-terminating enzyme fatty acid amide hydrolase (FAAH) from Arabidopsis in its apo and ligand-bound forms at 2.1- and 3.2-Å resolutions, respectively.
Date: March 20, 2019
Creator: Aziz, Mina; Wang, Xiaoqiang; Tripathi, Ashutosh; Bankaitis, Vytas A. & Chapman, Kent Dean
System: The UNT Digital Library
The EAR-motif of the Cys2/His2-type Zinc Finger Protein Zat7 Plays a Key Role in the Defense Response of Arabidopsis to Salinity Stress (open access)

The EAR-motif of the Cys2/His2-type Zinc Finger Protein Zat7 Plays a Key Role in the Defense Response of Arabidopsis to Salinity Stress

Article reporting that transgenic Arabidopsis plants constitutively expressing the Cys2/His2 zinc finger protein Zat7 have suppressed growth and are more tolerant to salinity stress. Findings demonstrate that the EAR-domain of Cys2/His2-type zinc finger proteins plays a key role in the defense response of Arabidopsis to abiotic stresses.
Date: March 23, 2007
Creator: Ciftci-Yilmaz, Sultan; Morsy, Mustafa R.; Song, Luhua; Coutu, Alicia; Krizek, Beth A.; Lewis, Michael W. et al.
System: The UNT Digital Library
Non-invasive Measures of Core Temperature versus Ingestible Thermistor during Exercise in the Heat (open access)

Non-invasive Measures of Core Temperature versus Ingestible Thermistor during Exercise in the Heat

This article discusses a study to cross-validate temporal, two tympanic devices, and oral devices compared to an ingestible thermistor during exercise in a hot, humid environment.
Date: March 2017
Creator: Fogt, Donovan L.; Henning, Andrea L.; Venable, Adam S. & McFarlin, Brian K.
System: The UNT Digital Library
An Arabidopsis Oxalyl-CoA Decarboxylase, AtOXC, Is Important for Oxalate Catabolism in Plants (open access)

An Arabidopsis Oxalyl-CoA Decarboxylase, AtOXC, Is Important for Oxalate Catabolism in Plants

This article identifies, in Arabidopsis, an oxalyl-CoA decarboxylase (AtOXC) that is capable of catalyzing the second step in the proposed pathway of oxalate catabolism.
Date: March 23, 2021
Creator: Foster, Justin; Cheng, Ninghui; Paris, Vincent; Wang, Lingfei; Wang, Jin; Wang, Xiaoqiang et al.
System: The UNT Digital Library
Quantitative Studies of Inhibitors of ADP-ribosylation in Vitro and in Vivo (open access)

Quantitative Studies of Inhibitors of ADP-ribosylation in Vitro and in Vivo

Article evaluating the selectivity of compounds originally identified as inhibitors of poly(ADP-ribose) polymerase on members of the three classes of enzymes. The results suggest that micromolar levels of the benzamides in the culture medium should allow selective inhibition of poly(ADP-ribose) metabolism in intact cells. Furthermore, comparative quantitative inhibition studies should prove useful for assigning the biological effects of these inhibitors as an effect on either poly(ADP-ribose) or mono(ADP-ribose) metabolism.
Date: March 15, 1989
Creator: Rankin, Patrick W.; Jacobson, Elaine L.; Benjamin, Robert C.; Moss, Joel & Jacobson, Myron K.
System: The UNT Digital Library
Effects of Coumarate 3-Hydroxylase Down-regulation on Lignin Structure (open access)

Effects of Coumarate 3-Hydroxylase Down-regulation on Lignin Structure

Article on the effects of coumarate 3-hydroxylase down-regulation on lignin structure.
Date: March 31, 2006
Creator: Ralph, John; Akiyama, Takuya; Kim, Hoon; Lu, Fachuang; Schatz, Paul F.; Marita, Jane M. et al.
System: The UNT Digital Library
Freeze-Etching of Azotobacter vinelandii: Examination of Wall, Exine, and Vesicles (open access)

Freeze-Etching of Azotobacter vinelandii: Examination of Wall, Exine, and Vesicles

Article on the freeze-etching of Azotobacter vinelandii and an examination of wall, exine, and vesicles.
Date: March 1972
Creator: Cagle, Gerald D.; Vela, G. Roland, 1927- & Pfister, Robert M.
System: The UNT Digital Library
A decision-making phase-space model for fairness assessment (open access)

A decision-making phase-space model for fairness assessment

Article on a decision-making phase-space model for fairness assessment.
Date: March 6, 2015
Creator: Tam, Nicoladie D.
System: The UNT Digital Library
Determining priority areas for an Endangered cold-adapted snake on warming mountaintops (open access)

Determining priority areas for an Endangered cold-adapted snake on warming mountaintops

This article develops a spatial prioritization model based on accurate estimates of remotely-sensed data and maps of threats potentially affecting long-term species persistence to identify priority areas for the conservation of the Endangered Greek meadow viper Vipera graeca, a cold-adapted species inhabiting mountaintops in the Pindos Mountains of Greece and Albania.
Date: March 12, 2020
Creator: Mizsei, Edvárd; Szabolcs, Márton; Szabó, Loránd; Boros, Zoltán; Mersini, Kujtim; Roussos, Stephanos Antonios et al.
System: The UNT Digital Library
POSMM: an efficient alignment-free metagenomic profiler that complements alignment-based profiling (open access)

POSMM: an efficient alignment-free metagenomic profiler that complements alignment-based profiling

Article presents POSMM, Python-Optimized Standard Markov Model classifier, which is a new incarnation of the Markov model approach to metagenomic sequence analysis. The authors claim that by combining POSMM with ultrafast classifiers such as Kraken2, their complementary strengths can be leveraged to produce higher overall accuracy in metagenomic sequence classification than by either as a standalone classifier. POSMM is a user-friendly and highly adaptable tool designed for broad use by the metagenome scientific community.
Date: March 8, 2023
Creator: Burks, David J.; Pusadkar, Vaidehi & Azad, Rajeev K.
System: The UNT Digital Library
Growth of Azotobacter vinelandii on Soil Nutrients (open access)

Growth of Azotobacter vinelandii on Soil Nutrients

Article on the growth of Azotobacter vinelandii on soil nutrients.
Date: March 1, 1987
Creator: Wu, Fang Jy; Moreno, Joaquin & Vela, G. Roland, 1927-
System: The UNT Digital Library
Effects of cultivar and nitrogen application rate on lint, seed, oil, and protein yields of field-grown cotton (open access)

Effects of cultivar and nitrogen application rate on lint, seed, oil, and protein yields of field-grown cotton

Article describes how the objective of this study was to evaluate the lint, seed, oil, and protein yield responses of cultivars with different seed mass and composition to N application rates (0–168 kg N ha−1) for field-grown cotton. The authors conclude that variability in the distribution of photosynthates to fiber and seed as well as seed oil and protein composition can significantly alter trends in fiber, seed, and seed component yields in response to cultivar or N application rates for field-grown cotton.
Date: March 9, 2023
Creator: Parkash, Ved; Snider, John L.; Bruce, Aaron; Ermanis, Alessandro; Virk, Gurpreet; Kaur, Navneet et al.
System: The UNT Digital Library
Mahi‐mahi (Coryphaena hippurus ) life development: morphological, physiological, behavioral and molecular phenotypes (open access)

Mahi‐mahi (Coryphaena hippurus ) life development: morphological, physiological, behavioral and molecular phenotypes

Article relates a study describing the development of cultured mahi‐mahi from the zygote stage to adult.
Date: March 18, 2019
Creator: Perrichon, Prescilla; Stieglitz, John D.; Xu, Elvis Genbo; Magnuson, Jason T.; Pasparakis, Christina; Mager, Edward M. et al.
System: The UNT Digital Library