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Environmental and Genetic Preconditioning for Long-Term Anoxia Responses Requires AMPK in Caenorhabditis elegans (open access)

Environmental and Genetic Preconditioning for Long-Term Anoxia Responses Requires AMPK in Caenorhabditis elegans

Article on environmental and genetic preconditioning for long-term anoxia responses requires AMPK in Caenorhabditis elegans.
Date: February 3, 2011
Creator: LaRue, Bobby L. & Padilla, Pamela A.
Object Type: Article
System: The UNT Digital Library
Interpreting genomic data via entropic dissection (open access)

Interpreting genomic data via entropic dissection

Article on interpreting genomic data via entropic dissection.
Date: October 3, 2012
Creator: Azad, Rajeev K. & Li, Jing
Object Type: Article
System: The UNT Digital Library
Draft Genome Sequence of the Cyanotroph Pseudomonas monteilii BCN3 (open access)

Draft Genome Sequence of the Cyanotroph Pseudomonas monteilii BCN3

This article reports the first draft genome of Pseudomonas monteilii BCN3, a cyanotroph isolated from sewage sludge.
Date: January 3, 2019
Creator: Jones, Lauren B. & Kunz, Daniel A.
Object Type: Article
System: The UNT Digital Library
Remodeling the epigenome and (epi)cytoskeleton: a new paradigm for co-regulation by methylation (open access)

Remodeling the epigenome and (epi)cytoskeleton: a new paradigm for co-regulation by methylation

This article is a commentary on coordinated use of methyl marks to remodel both the epigenome and the (epi)cytoskeleton, which opens the possibility for integrated regulation (referred to as ‘epiregulation’) of other higher-level functions, such as muscle contraction or learning and memory, and could even have evolutionary implications.
Date: July 3, 2020
Creator: Walker, Cheryl & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Marketing via E-mail Solicitation by Predatory (and Legitimate) Journals: An Evaluation of Quality, Frequency, and Relevance (open access)

Marketing via E-mail Solicitation by Predatory (and Legitimate) Journals: An Evaluation of Quality, Frequency, and Relevance

This article studies the marketing practices of predatory journals through the analysis of a a subset of the 1,816 e-mails received by a single university biology faculty member during a 24-month period.
Date: December 3, 2018
Creator: Burggren, Warren W.; Madasu, Dilip; Hawkins, Kevin S. & Halbert, Martin
Object Type: Article
System: The UNT Digital Library
The Water-Water Cycle Is Essential for Chloroplast Protection in the Absence of Stress (open access)

The Water-Water Cycle Is Essential for Chloroplast Protection in the Absence of Stress

Article showing that knockdown Arabidopsis plants with suppressed expression of the key water-water cycle enzyme, thylakoid-attached copper/zinc superoxide dismutase (KD-SOD), are suppressed in their growth and development. This article provides e genetic evidence for the importance of the water-water cycle in protecting the photosynthetic apparatus of higher plants from photooxidative damage.
Date: October 3, 2003
Creator: Rizhsky, Ludmila; Liang, Hongjian & Mittler, Ron
Object Type: Article
System: The UNT Digital Library
Role of Hypoxia in the Evolution and Development of the Cardiovascular System (open access)

Role of Hypoxia in the Evolution and Development of the Cardiovascular System

Article on the role of hypoxia in the evolution and development of the cardiovascular system.
Date: August 3, 2007
Creator: Fisher, Steven A. & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Identification of Novel Genomic Islands in Liverpool Epidemic Strain of Pseudomonas aeruginosa Using Segmentation and Clustering (open access)

Identification of Novel Genomic Islands in Liverpool Epidemic Strain of Pseudomonas aeruginosa Using Segmentation and Clustering

This article utilizes a recursive segmentation and cluster procedure presented as a genome-mining tool, GEMINI, to decipher genomic islands and understand their contributions to the evolution of virulence and antibiotic resistance in Pseudomonas aeruginosa.
Date: August 3, 2016
Creator: Jani, Mehul; Mathee, Kalal & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Draft Genome Sequence of Cupriavidus sp. Strain SK-3, a 4-Chlorobiphenyl- and 4-Clorobenzoic Acid-Degrading Bacterium (open access)

Draft Genome Sequence of Cupriavidus sp. Strain SK-3, a 4-Chlorobiphenyl- and 4-Clorobenzoic Acid-Degrading Bacterium

Article on the draft genome sequence of Cupriavidus sp. strain SK-3, a 4-chlorobiphenyl- and 4-clorobenzoic acid-degrading bacterium.
Date: July 3, 2014
Creator: Vilo, Claudia A.; Benedik, Michael J.; Ilori, Matthew Olusoji & Dong, Qunfeng
Object Type: Article
System: The UNT Digital Library
Evolutionary implications of the distribution and variation of the skeletal muscles of the anuran lymphatic system (open access)

Evolutionary implications of the distribution and variation of the skeletal muscles of the anuran lymphatic system

This article defines character states and describes variation of these putative lymphatic skeletal muscles: the M. cutaneus pectoris, M. cutaneus dorsi, M. piriformis, M. sphincter ani cloacalis, and the complex of the M. gracilis minor/M. abdominal crenator.
Date: April 3, 2013
Creator: Drewes, Robert C.; Hillman, Stanley S.; Hedrick, Michael & Withers, Philip C.
Object Type: Article
System: The UNT Digital Library
A modified aeroponic system for growing small-seeded legumes and other plants to study root systems (open access)

A modified aeroponic system for growing small-seeded legumes and other plants to study root systems

Authors of the article state that various growth systems are available for studying plant root growth and plant–microbe interactions including hydroponics and aeroponics. The aim of their study is to present step-by-step instructions for fabricating an aeroponic system, also called a “caisson,” that has been in use in several legume research labs studying the development of symbiotic nitrogen fixing nodules, but for which detailed directions are not currently available.
Date: March 3, 2023
Creator: Cai, Jingya; Veerappan, Vijaykumar; Arildsen, Kate; Sullivan, Catrina; Piechowicz, Megan; Frugoli, Julia et al.
Object Type: Article
System: The UNT Digital Library
Methods for Extending the Freshness of Cut Flowers, Ornamental Trees, and Plant Cuttings (open access)

Methods for Extending the Freshness of Cut Flowers, Ornamental Trees, and Plant Cuttings

Patent relating to methods for extending the freshness of cut flowers, ornamental trees, and plant cuttings.
Date: October 30, 2000
Creator: Chapman, Kent D. & Austin-Brown, Shea L.
Object Type: Patent
System: The UNT Digital Library
Identification of Pueraria spp. through DNA barcoding and comparative transcriptomics (open access)

Identification of Pueraria spp. through DNA barcoding and comparative transcriptomics

This article presents research where various kudzu accessions were analyzed through barcoding and comparative transcriptomics, generating tools for identification and molecular pathway analysis.
Date: January 3, 2022
Creator: Adolfo, Laci M.; Rao, Xiaolan & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Combining loss of function of FOLYLPOLYGLUTAMATE SYNTHETASE1 and CAFFEOYL-COA 3-O-METHYLTRANSFERASE1 for lignin reduction and improved saccharification efficiency in Arabidopsis thaliana (open access)

Combining loss of function of FOLYLPOLYGLUTAMATE SYNTHETASE1 and CAFFEOYL-COA 3-O-METHYLTRANSFERASE1 for lignin reduction and improved saccharification efficiency in Arabidopsis thaliana

This article tests if lignin content can be further reduced by combining genetic mutations in C1 metabolism and the lignin biosynthetic pathway by generating and functionally characterizing fpgs1ccoaomt1 double mutants. The observations demonstrate that additional reduction in lignin content and improved sugar release can be achieved by simultaneous downregulation of a gene in the C1 (FPGS1) and lignin biosynthetic (CCOAOMT) pathways.
Date: December 31, 2018
Creator: Xie, Hongli; Engle, Nancy L.; Venketachalam, Sivasankari; Yoo, Chang Geun; Barros, Jaime; Lecoultre, Mitch et al.
Object Type: Article
System: The UNT Digital Library
Combining loss of function of FOLYLPOLYGLUTAMATE SYNTHETASE1 and CAFFEOYL-COA 3-O-METHYLTRANSFERASE1 for lignin reduction and improved saccharification efficiency in Arabidopsis thaliana (open access)

Combining loss of function of FOLYLPOLYGLUTAMATE SYNTHETASE1 and CAFFEOYL-COA 3-O-METHYLTRANSFERASE1 for lignin reduction and improved saccharification efficiency in Arabidopsis thaliana

Article describes study in which fpgs1ccoaomt1 double mutants were generated and functionally characterized in order to test if lignin content can be further reduced by combining genetic mutations in C1 metabolism and the lignin biosynthetic pathway.
Date: May 3, 2019
Creator: Xie, Hongli; Engle, Nancy L.; Venketachalam, Sivasankari; Yoo, Chang Geun; Barros, Jaime; Lecoultre, Mitch et al.
Object Type: Article
System: The UNT Digital Library
Instructional Models for Course-Based Research Experience (CRE) Teaching (open access)

Instructional Models for Course-Based Research Experience (CRE) Teaching

This article presents a study that was done over a period of 3 years to explicate the instructional processes involved in teaching an undergraduate course-based research experience (CRE). The study presented here delineated a set of specific instructional practices used by active CRE instructors and modeled the relations between the use of these practices and specified outcomes. The resultant educational models should provide clarification of the ways in which the aims of CRE can be effectively achieved by instructors.
Date: January 3, 2022
Creator: Hanauer, David I.; Graham, Mark J.; Arnold, Rachel J.; Ayuk, Mary A.; Balish, Mitchell F.; Beyer, Andrea R. et al.
Object Type: Article
System: The UNT Digital Library
A gene-editing/complementation strategy for tissue-specific lignin reduction while preserving biomass yield (open access)

A gene-editing/complementation strategy for tissue-specific lignin reduction while preserving biomass yield

This article develops a method, using a single DNA construct that uses CRISPR–Cas9 gene editing to knock-out expression of an endogenous gene of lignin monomer biosynthesis while at the same time expressing a modified version of the gene’s open reading frame that escapes cutting by the Cas9 system and complements the introduced mutation in a tissue-specific manner. This method is applicable to any plant species in which transformation and gene editing are feasible and validated vessel-specific promoters are available.
Date: September 3, 2021
Creator: Yu, Hasi; Liu, Chang & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Study of traits and recalcitrance reduction of field-grown COMT down-regulated switchgrass (open access)

Study of traits and recalcitrance reduction of field-grown COMT down-regulated switchgrass

This article discusses the fundamental features of why biomass is recalcitrant to conversion without pretreatment.
Date: January 3, 2017
Creator: Li, Mi; Pu, Yunqiao; Yoo, Chang Geun; Gjersing, Erica; Decker, Stephen R.; Doeppke, Crissa et al.
Object Type: Article
System: The UNT Digital Library
Generation of transgenic zebrafish with 2 populations of RFP- and GFP-labeled thrombocytes: analysis of their lipids (open access)

Generation of transgenic zebrafish with 2 populations of RFP- and GFP-labeled thrombocytes: analysis of their lipids

Article analyzing the lipids in transgenic zebrafish. Separating RFP+ and GFP+ thrombocytes from the GloFli fish developed here led to the analysis of their lipid composition.DiI-labeled liposomes with similar PE and PC concentrations found in RFP+ thrombocytes explained DiI labeling of thrombocytes.
Date: July 23, 2018
Creator: Fallatah, Weam; De Silva, Imesha W.; Verbeck, Guido F. & Jagadeeswaran, Pudur
Object Type: Article
System: The UNT Digital Library

Respiratory and cardiovascular responses to oxygen and carbon dioxide levels in internally pipped chicken embryos

Presentation for the 2008 University Scholars Day at the University of North Texas discussing research on respiratory and cardiovascular responses to oxygen and carbon dioxide levels in internally pipped chicken embryos.
Date: April 3, 2008
Creator: Sbong, Stephanie & Dzialowski, Edward M. (Edward Michael)
Object Type: Presentation
System: The UNT Digital Library

Smoking, Secondhand Smoke, And Quitting: A Cessation Program

Presentation for the 2008 University Scholars Day at the University of North Texas discussing smoking, secondhand smoke, and quitting.
Date: April 3, 2008
Creator: Settegast, Brandi & Eve, Susan Brown
Object Type: Presentation
System: The UNT Digital Library
Smoking, Secondhand Smoke, And Quitting: A Cessation Program (open access)

Smoking, Secondhand Smoke, And Quitting: A Cessation Program

This paper discusses a research study that uses an education program designed to teach young women about the health effects of smoking, secondhand smoke, and the benefits of quitting.
Date: April 3, 2008
Creator: Settegast, Brandi & Eve, Susan Brown
Object Type: Paper
System: The UNT Digital Library

Links Between Mercury and Liver Damage in Wild Fish Populations

Presentation for the 2008 University Scholars Day at the University of North Texas discussing research on links between mercury and liver damage in wild fish populations.
Date: April 3, 2008
Creator: Gevertz, Amanda Kate; Roberts, Aaron & Drevnick, Paul E.
Object Type: Presentation
System: The UNT Digital Library

Sex, Stress, and Oxygen Deprivation: Gender-Specific Phenotypes Modulate Survival in Anoxia

Presentation for the 2008 University Scholars Day at the University of North Texas discussing sex, stress, oxygen deprivation, and gender-specific phenotypes modulate survival in anoxia.
Date: April 3, 2008
Creator: LeBlanc, Michelle & Padilla, Pamela A.
Object Type: Presentation
System: The UNT Digital Library