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Inhibition of vimentin or B1 integrin reverts morphology of prostate tumor cells grown in laminin-rich extracellular matrix gels and reduces tumor growth in vivo (open access)

Inhibition of vimentin or B1 integrin reverts morphology of prostate tumor cells grown in laminin-rich extracellular matrix gels and reduces tumor growth in vivo

Prostate epithelial cells grown embedded in laminin-rich extracellular matrix (lrECM) undergo morphologic changes that closely resemble their architecture in vivo. In this study, growth characteristics of three human prostate epithelial sublines derived from the same cellular lineage, but displaying different tumorigenic and metastatic properties in vivo, were assessed in three-dimensional lrECM gels. M12, a highly tumorigenic and metastatic subline, was derived from the immortalized, prostate epithelial P69 cell line by selection in athymic, nude mice and found to contain a deletion of 19p-q13.1. The stable reintroduction of an intact human chromosome 19 into M12 resulted in a poorly tumorigenic subline, designated F6. When embedded in lrECM gels, the parental, nontumorigenic P69 line produced acini with clearly defined lumena. Immunostaining with antibodies to {beta}-catenin, E-cadherin, or {alpha}6 and {beta}1 integrins showed polarization typical of glandular epithelium. In contrast, the metastatic M12 subline produced highly disorganized cells with no evidence of polarization. The F6 subline reverted to acini-like structures exhibiting basal polarity marked with integrins. Reducing either vimentin levels via small interfering RNA interference or the expression of {alpha}6 and {beta}1 integrins by the addition of blocking antibodies, reorganized the M12 subline into forming polarized acini. The loss of vimentin significantly reduced …
Date: June 12, 2008
Creator: Zhang, Xueping; Fournier, Marcia V; Ware, Joy L; Bissell, Mina J; Yacoub, Adly & Zehner, Zendra E
System: The UNT Digital Library
Transcriptional Response of Desulfovibrio vulgaris Hildenborough to Oxidative Stress Mimicking Environmental Conditions (open access)

Transcriptional Response of Desulfovibrio vulgaris Hildenborough to Oxidative Stress Mimicking Environmental Conditions

Sulphate-reducing bacteria are anaerobes readily found in oxic-anoxic interfaces. Multiple defence pathways against oxidative conditions were identified in these organisms and proposed to be differentially expressed under different concentrations of oxygen, contributing to their ability to survive oxic conditions. In this study, Desulfovibrio vulgaris Hildenborough cells were exposed to the highest concentration of oxygen that sulphate-reducing bacteria are likely to encounter in natural habitats, and the global transcriptomic response was determined. 307 genes were responsive, with cellular roles in energy metabolism, protein fate, cell envelope and regulatory functions, including multiple genes encoding heat shock proteins, peptidases and proteins with heat shock promoters. Of the oxygen reducing mechanisms of D. vulgaris only the periplasmic hydrogen-dependent mechanism is up-regulated, involving the [NiFeSe]hydrogenase, formate dehydrogenase(s) and the Hmc membrane complex. The oxidative defence response concentrates on damage repair by metal-free enzymes. These data, together with the down regulation of the Fur operon, which restricts the availability of iron, and the lack of response of the PerR operon, suggest that a major effect of this oxygen stress is the inactivation and/or degradation of multiple metalloproteins present in D. vulgaris as a consequence of oxidative damage to their metal clusters.
Date: March 12, 2008
Creator: Pereira, Patricia M.; He, Qiang; Xavier, Antonio V.; Zhou, Jizhong; Pereira, Ines A.C. & Louro, Ricardo O.
System: The UNT Digital Library
A New Scanning Tunneling Microscope Reactor Used for High Pressure and High Temperature Catalysis Studies (open access)

A New Scanning Tunneling Microscope Reactor Used for High Pressure and High Temperature Catalysis Studies

We present the design and performance of a home-built high-pressure and high-temperature reactor equipped with a high-resolution scanning tunneling microscope (STM) for catalytic studies. In this design, the STM body, sample, and tip are placed in a small high pressure reactor ({approx}19 cm{sup 3}) located within an ultrahigh vacuum (UHV) chamber. A sealable port on the wall of the reactor separates the high pressure environment in the reactor from the vacuum environment of the STM chamber and permits sample transfer and tip change in UHV. A combination of a sample transfer arm, wobble stick, and sample load-lock system allows fast transfer of samples and tips between the preparation chamber, high pressure reactor, and ambient environment. This STM reactor can work as a batch or flowing reactor at a pressure range of 10{sup -13} to several bars and a temperature range of 300-700 K. Experiments performed on two samples both in vacuum and in high pressure conditions demonstrate the capability of in situ investigations of heterogeneous catalysis and surface chemistry at atomic resolution at a wide pressure range from UHV to a pressure higher than 1 atm.
Date: May 12, 2008
Creator: Tao, Feng; Tang, David C.; Salmeron, Miquel & Somorjai, Gabor A.
System: The UNT Digital Library
Determination of the electronic structure of bilayer graphene from infrared spectroscopy results (open access)

Determination of the electronic structure of bilayer graphene from infrared spectroscopy results

We present an experimental study of the infrared conductivity, transmission, and reflection of a gated bilayer graphene and their theoretical analysis within the Slonczewski-Weiss-McClure (SWMc) model. The infrared response is shown to be governed by the interplay of the interband and the intraband transitions among the four bands of the bilayer. The position of the main conductivity peak at thecharge-neutrality point is determined by the interlayer tunneling frequency. The shift of this peak as a function of the gate voltage gives information about less known parameters of the SWMc model such as those responsible for the electron-hole and sublattice asymmetries. These parameter values are shown to be consistent with recent electronic structure calculations for the bilayer graphene and the SWMc parameters commonly used for the bulk graphite.
Date: November 12, 2008
Creator: Zhang, L. M.; Li, Z. Q.; Basov, D. N.; Fogler, M. M.; Hao, Z. & Martin, Michael C.
System: The UNT Digital Library
Comparison of LiMnPO4 made by Combustion and Hydrothermal Syntheses (open access)

Comparison of LiMnPO4 made by Combustion and Hydrothermal Syntheses

Among the olivine-structured metal phosphate family, LiMnPO{sub 4} exhibits a high discharge potential (4V), which is still compatible with common electrolytes, making it interesting for use in the next generation of Li ion batteries. The extremely low electronic conductivity of this material severely limits its electrochemical performance, however. One strategy to overcome this limitation is to make LiMnPO{sub 4} nanoparticulate to decrease the diffusion distance. Another is to add a carbon or other conductive coating in intimate contact with the nanoparticles of the main phase, as is commonly done with LiFePO{sub 4}. The electrochemical performance of LiFePO{sub 4} is highly dependent on the quality of the carbon coatings on the particles, among other variables. Combustion synthesis allows the co-synthesis of nanoparticles coated with carbon in one step. Hydrothermal synthesis is used industrially to make LiFePO{sub 4} cathode materials and affords a good deal of control over purity, crystallinity, and particle size. A wide range of olivine-structured materials has been successfully prepared by this technique, including LiMnPO{sub 4} in this study. In this paper, we report on the new synthesis of nano-LiMnPO{sub 4} by a combustion method. The purity is dependent upon the conditions used for synthesis, including the type of …
Date: October 12, 2008
Creator: Chen, Jiajun; Doeff, Marca M. & Wang, Ruigang
System: The UNT Digital Library
The Airborne Metagenome in an Indoor Urban Environment (open access)

The Airborne Metagenome in an Indoor Urban Environment

The indoor atmosphere is an ecological unit that impacts on public health. To investigate the composition of organisms in this space, we applied culture-independent approaches to microbes harvested from the air of two densely populated urban buildings, from which we analyzed 80 megabases genomic DNA sequence and 6000 16S rDNA clones. The air microbiota is primarily bacteria, including potential opportunistic pathogens commonly isolated from human-inhabited environments such as hospitals, but none of the data contain matches to virulent pathogens or bioterror agents. Comparison of air samples with each other and nearby environments suggested that the indoor air microbes are not random transients from surrounding outdoor environments, but rather originate from indoor niches. Sequence annotation by gene function revealed specific adaptive capabilities enriched in the air environment, including genes potentially involved in resistance to desiccation and oxidative damage. This baseline index of air microbiota will be valuable for improving designs of surveillance for natural or man-made release of virulent pathogens.
Date: February 12, 2008
Creator: Tringe, Susannah; Zhang, Tao; Liu, Xuguo; Yu, Yiting; Lee, Wah Heng; Yap, Jennifer et al.
System: The UNT Digital Library
Perspective on the Role of Negative Ions and Ion-Ion Plasmas in Heavy Ion Fusion Science, Magnetic Fusion Energy, and Related Fields (open access)

Perspective on the Role of Negative Ions and Ion-Ion Plasmas in Heavy Ion Fusion Science, Magnetic Fusion Energy, and Related Fields

Some years ago it was suggested that halogen negative ions [1] could offer a feasible alternative path to positive ions as a heavy ion fusion driver beam which would not suffer degradation due to electron accumulation in the accelerator and beam transport system, and which could be converted to a neutral beam by photodetachment near the chamber entrance if desired. Since then, experiments have demonstrated that negative halogen beams can be extracted and accelerated away from the gas plume near the source with a surviving current density close to what could be achieved with a positive ion of similar mass, and with comparable optical quality. In demonstrating the feasibility of halogen negative ions as heavy ion driver beams, ion � ion plasmas, an interesting and somewhat novel state of matter, were produced. These plasmas, produced near the extractor plane of the sources, appear, based upon many lines of experimental evidence, to consist of almost equal densities of positive and negative chlorine ions, with only a small component of free electrons. Serendipitously, the need to extract beams from this plasma for driver development provides a unique diagnostic tool to investigate the plasma, since each component - positive ions, negative ions, and …
Date: August 12, 2008
Creator: Kwan, L. Grisham and J.W.
System: The UNT Digital Library
Deep oxidation of methane on particles derived from YSZ-supported Pd-Pt-(O) coatings synthesized by pulsed filtered cathodic arc (open access)

Deep oxidation of methane on particles derived from YSZ-supported Pd-Pt-(O) coatings synthesized by pulsed filtered cathodic arc

Methane conversion tests were performed on Pd, PdOy, Pd0.6Pt0.4Oy and Pd0.4Pt0.6Oy thin films deposited on yttria stabilized zirconia (YSZ) substrates. Pt containing films exhibited poor activity and high reducibility. As-deposited Pd and PdOy films showed good activity and transformed, during the cycling process, to particles dispersed on the YSZ substrates. The higher reaction rate of initially PdOy films was explained by a better dispersion of the catalyst. A drop of the reaction rate was observed when the temperature exceeded 735oC and 725oC for initially Pd and PdOy, respectively, which can be associated with the high-temperature reduction of PdO into Pd.
Date: December 12, 2008
Creator: Horwat, D.; Endrino, J. L.; Boreave, A.; Karoum, R.; Pierson, J. F.; Weber, S. et al.
System: The UNT Digital Library
Examining Technology, Structure and Identity During an Enterprise System Implementation (open access)

Examining Technology, Structure and Identity During an Enterprise System Implementation

This paper presents a longitudinal study of an Enterprise System (ES) implementation by critically examining the discursive context in which an ES implementation unfolds. The findings show that users strongly supported the ES in the earlier stage of implementation when the technology was an imaginary phenomenon. However, in later stages, when the technology is in use, user support was not consistent. In this phase the ES produces loss of control and an inability to function as an arbiter of fairness (in allocating resources associated with the system) thereby directly challenging existing professional identities and roles. These outcomes, in turn, generate acts of resistance on the part of workers. Users reach inside the technology and reshape it by devising creative workarounds that produce a sense of reskilling to counter the deskilling produced by the loss of control and power. The analysis also shows that an ES is a complex social phenomenon that is intricately linked to and complicit in shaping organizational structure and identity. In particular this study shows how technology, structure, and identity are in a mutually constitutive relationship.
Date: November 12, 2008
Creator: Alvarez, Rosio
System: The UNT Digital Library
The Origins of the Rate Enhancement in LiNi0.4Co0.2-yAlyMn0.4O2 (0<y<_0.2) Cathode Materials (open access)

The Origins of the Rate Enhancement in LiNi0.4Co0.2-yAlyMn0.4O2 (0<y<_0.2) Cathode Materials

Recently, much research has been directed towards finding a replacement cathode material for LiCoO{sub 2} combining high performance with lower cost and toxicity. One promising candidate material is the mixed transition metal oxide LiNi{sub 0.4}Co{sub 0.2}Mn{sub 0.4}O{sub 2}, which delivers 180 mAh/g below 4.4 V versus Li/Li{sup +}. However, in this material, there is 4% anti-site cation mixing, which hinders the mobility of lithium within the lattice, adversely affecting its rate performance in lithium batteries. Ongoing work in our lab has shown that partial or full substitution of cobalt with aluminum, LiNi{sub 0.4}Co{sub 0.2-y}Al{sub y}Mn{sub 0.4}O{sub 2} (0 < y {le} 0.2), can lead to significant improvements in rate performance. In particular, LiNi{sub 0.4}Co{sub 0.15}Al{sub 0.05}Mn{sub 0.4}O{sub 2} shows greatly improved rate capability with almost no sacrifice in the overall capacity delivered at low rates between 2.0 and 4.3V (Figure 1). The smaller ionic radius of Al{sup 3+} in octahedral coordination (0.535 {angstrom}) compared to Li{sup +} (0.76 {angstrom}) creates a strong driving force for the formation of a more lamellar structure in the aluminum containing materials. XRD experiments and subsequent Rietveld refinement (Figure 2) reveal a significant decrease in anti-site defect concentration upon aluminum substitution, dropping from {approx}4% at …
Date: October 12, 2008
Creator: Doeff, Marca M. & Wilcox, James D.
System: The UNT Digital Library
The Siderocalin/Enterobactin Interaction: A Link between Mammalian Immunity and Bacterial Iron Transport (open access)

The Siderocalin/Enterobactin Interaction: A Link between Mammalian Immunity and Bacterial Iron Transport

The siderophore enterobactin (Ent) is produced by enteric bacteria to mediate iron uptake. Ent scavenges iron and is taken up by the bacteria as the highly stable ferric complex [Fe{sup III}(Ent)]{sup 3-}. This complex is also a specific target of the mammalian innate immune system protein, Siderocalin (Scn), which acts as an anti-bacterial agent by specifically sequestering siderophores and their ferric complexes during infection. Recent literature suggesting that Scn may also be involved in cellular iron transport has increased the importance of understanding the mechanism of siderophore interception and clearance by Scn; Scn is observed to release iron in acidic endosomes and [Fe{sup III}(Ent)]{sup 3-} is known to undergo a change from catecholate to salicylate coordination in acidic conditions, which is predicted to be sterically incompatible with the Scn binding pocket (also referred to as the calyx). To investigate the interactions between the ferric Ent complex and Scn at different pH values, two recombinant forms of Scn with mutations in three residues lining the calyx were prepared: Scn-W79A/R81A and Scn-Y106F. Binding studies and crystal structures of the Scn-W79A/R81A:[Fe{sup III}(Ent)]{sup 3-} and Scn-Y106F:[Fe{sup III}(Ent)]{sup 3-} complexes confirm that such mutations do not affect the overall conformation of the protein but do …
Date: May 12, 2008
Creator: Meux, Susan C.
System: The UNT Digital Library
Improvement in Plasma Performance with Lithium Coatings in NSTX (open access)

Improvement in Plasma Performance with Lithium Coatings in NSTX

Lithium as a plasma-facing material has attractive features, including a reduction in the recycling of hydrogenic species and the potential for withstanding high heat and neutron fluxes in fusion reactors. Dramatic effects on plasma performance with lithium-coated plasma-facing components (PFCOs) have been demonstrated on many fusion devices, including TFTR, [1] T-11M, [2] and FT-U. [3] Using a liquid-lithium-filled tray as a limiter, the CDX-U device achieved very significant enhancement in the confinement time of ohmically heated plasmas. [4] The recent NSTX experiments reported here have demonstrated, for the first time, significant and recurring benefits of lithium PFC coatings on divertor plasma performance in both L- and H- mode regimes heated by neutral beams.
Date: September 12, 2008
Creator: Kaita, R.; Ahn, J.-W.; Allain, J. P.; Bell, M. G.; Bell, R.; Boedo, J. et al.
System: The UNT Digital Library
TRITIUM EFFECTS ON DYNAMIC MECHANICAL PROPERTIES OF POLYMERIC MATERIALS (open access)

TRITIUM EFFECTS ON DYNAMIC MECHANICAL PROPERTIES OF POLYMERIC MATERIALS

Dynamic mechanical analysis has been used to characterize the effects of tritium gas (initially 1 atm. pressure, ambient temperature) exposure over times up to 2.3 years on several thermoplastics-ultrahigh molecular weight polyethylene (UHMW-PE), polytetrafluoroethylene (PTFE), and Vespel{reg_sign} polyimide, and on several formulations of elastomers based on ethylene propylene diene monomer (EPDM). Tritium exposure stiffened the elastic modulus of UHMW-PE up to about 1 year and then softened it, and reduced the viscous response monotonically with time. PTFE initially stiffened, however the samples became too weak to handle after nine months exposure. The dynamic properties of Vespel{reg_sign} were not affected. The glass transition temperature of the EPDM formulations increased approximately 4 C. following three months tritium exposure.
Date: November 12, 2008
Creator: Clark, E
System: The UNT Digital Library
Breakdown Characteristics Study on an 18 Cell X-band Structure (open access)

Breakdown Characteristics Study on an 18 Cell X-band Structure

A CLIC designed 18 cells, low group velocity (2.4% to 1.0% c), X-band (11.4 GHz) accelerator structure (denoted T18) was designed at CERN, its cells were built at KEK, and it was assembled and tested at SLAC. An interesting feature of this structure is that the gradient in the last cell is about 50% higher than that in the first cell. This structure has been RF conditioned at SLAC NLCTA for about 1400 hours where it incurred about 2200 breakdowns. This paper presents the characteristics of these breakdowns, including (1) the breakdown rate dependence on gradient, pulse width and conditioning time, (2) the breakdown distribution along the structure, (3) relation between breakdown and pulsed heating dependence study and (4) electric field decay time for breakdown changing over the whole conditioning time. Overall, this structure performed very well, having a final breakdown rate of less than 1e-6/pulse/m at 106 MV/m with 230 ns pulse width.
Date: November 12, 2008
Creator: Wang, Faya
System: The UNT Digital Library
RADIATION EFFECTS ON EPOXY/CARBON FIBER COMPOSITE (open access)

RADIATION EFFECTS ON EPOXY/CARBON FIBER COMPOSITE

The Department of Energy Savannah River Site vitrifies nuclear waste incident to defense programs through its Defense Waste Processing Facility (DWPF). The piping in the DWPF seal pot jumper configuration must withstand the stresses during an unlikely but potential deflagration event, and maintain its safety function for a 20-year service life. Carbon fiber-reinforced epoxy composites (CFR) were proposed for protection and reinforcement of piping during such an event. The proposed CFR materials have been ASME-approved (Section XI, Code Case N-589-1) for post-construction maintenance and is DOT-compliant per 49CFR 192 and 195. The proposed carbon fiber/epoxy composite reinforcement system was originally developed for pipeline rehabilitation and post-construction maintenance in petrochemical, refineries, DOT applications and other industries. The effects of ionizing radiation on polymers and organic materials have been studied for many years. The majority of available data are based on traditional exposures to gamma irradiation at high dose rates ({approx}10,000 Gy/hr) allowing high total dose within reasonable test periods and general comparison of different materials exposed at such conditions. However, studies in recent years have shown that degradation of many polymers are sensitive to dose rate, with more severe degradation often observed at similar or even lower total doses when exposed …
Date: December 12, 2008
Creator: Hoffman, E & Eric Skidmore, E
System: The UNT Digital Library
Index Theorem for Topological Excitations on R^3 \times S^1 and Chern-Simons Theory (open access)

Index Theorem for Topological Excitations on R^3 \times S^1 and Chern-Simons Theory

We derive an index theorem for the Dirac operator in the background of various topological excitations on an R{sup 3} x S{sup 1} geometry. The index theorem provides more refined data than the APS index for an instanton on R{sup 4} and reproduces it in decompactification limit. In the R{sup 3} limit, it reduces to the Callias index theorem. The index is expressed in terms of topological charge and the {eta}-invariant associated with the boundary Dirac operator. Neither topological charge nor {eta}-invariant is typically an integer, however, the non-integer parts cancel to give an integer-valued index. Our derivation is based on axial current non-conservation--an exact operator identity valid on any four-manifold--and on the existence of a center symmetric, or approximately center symmetric, boundary holonomy (Wilson line). We expect the index theorem to usefully apply to many physical systems of interest, such as low temperature (large S{sup 1}, confined) phases of gauge theories, center stabilized Yang-Mills theories with vector-like or chiral matter (at S{sup 1} of any size), and supersymmetric gauge theories with supersymmetry-preserving boundary conditions (also at any S{sup 1}). In QCD-like and chiral gauge theories, the index theorem should shed light into the nature of topological excitations responsible for …
Date: December 12, 2008
Creator: Poppitz, Erich & Unsal, Mithat
System: The UNT Digital Library
Toward Production From Gas Hydrates: Current Status, Assessment of Resources, and Simulation-Based Evaluationof Technology and Potential (open access)

Toward Production From Gas Hydrates: Current Status, Assessment of Resources, and Simulation-Based Evaluationof Technology and Potential

Gas hydrates are a vast energy resource with global distribution in the permafrost and in the oceans. Even if conservative estimates are considered and only a small fraction is recoverable, the sheer size of the resource is so large that it demands evaluation as a potential energy source. In this review paper, we discuss the distribution of natural gas hydrate accumulations, the status of the primary international R&D programs, and the remaining science and technological challenges facing commercialization of production. After a brief examination of gas hydrate accumulations that are well characterized and appear to be models for future development and gas production, we analyze the role of numerical simulation in the assessment of the hydrate production potential, identify the data needs for reliable predictions, evaluate the status of knowledge with regard to these needs, discuss knowledge gaps and their impact, and reach the conclusion that the numerical simulation capabilities are quite advanced and that the related gaps are either not significant or are being addressed. We review the current body of literature relevant to potential productivity from different types of gas hydrate deposits, and determine that there are consistent indications of a large production potential at high rates over …
Date: February 12, 2008
Creator: Reagan, Matthew; Moridis, George J.; Collett, Timothy; Boswell, Ray; Kurihara, M.; Reagan, Matthew T. et al.
System: The UNT Digital Library
Performance of a 1.3 GHZ Normal-Conducting 5-Cell Standing-Wave Cavity (open access)

Performance of a 1.3 GHZ Normal-Conducting 5-Cell Standing-Wave Cavity

A 5-cell, normal-conducting, 1.3 GHz, standing-wave (SW) cavity was built as a prototype capture accelerator for the ILC positron source. Although the ILC uses predominantly superconducting cavities, the capture cavity location in both a high radiation environment and a solenoidal magnetic field requires it to be normal conducting. With the relatively high duty ILC beam pulses (1 msec at 5 Hz) and the high gradient required for efficient positron capture (15 MV/m), achieving adequate cavity cooling to prevent significant detuning is challenging. This paper presents the operational performance of this cavity including the processing history, characteristics of the breakdown events and the acceleration gradient witnessed by a single bunch at different injection times for different rf pulse lengths.
Date: November 12, 2008
Creator: Wang, Faya; Adolphsen, Chris & Wang, Juwen
System: The UNT Digital Library
Ferromagnetism and suppression of metallic clusters in Fe implanted ZnO -- a phenomenon related to defects? (open access)

Ferromagnetism and suppression of metallic clusters in Fe implanted ZnO -- a phenomenon related to defects?

We investigated ZnO(0001) single crystals annealed in high vacuum with respect to their magnetic properties and cluster formation tendency after implant-doping with Fe. While metallic Fe cluster formation is suppressed, no evidence for the relevance of the Fe magnetic moment to the observed ferromagnetism was found. The latter along with the cluster suppression is discussed with respect to defects in the ZnO host matrix, since the crystalline quality of the substrates was lowered due to the preparation as observed by x-ray diffraction.
Date: March 12, 2008
Creator: Arenholz, Elke; Zhou, S.; Potzger, K.; Talut, G.; Reuther, H.; Kuepper, K. et al.
System: The UNT Digital Library
Surprising Coordination Geometry Differences in Ce(IV)- and Pu(IV)-Maltol Complexes (open access)

Surprising Coordination Geometry Differences in Ce(IV)- and Pu(IV)-Maltol Complexes

As part of a study to characterize the detailed coordination behavior of Pu(IV), single crystal X-ray diffraction structures have been determined for Pu(IV) and Ce(IV) complexes with the naturally-occurring ligand maltol (3-hydroxy-2-methyl-pyran-4-one) and its derivative bromomaltol (5-bromo-3-hydroxy-2-methyl-pyran-4-one). Although Ce(IV) is generally accepted as a structural analog for Pu(IV), and the maltol complexes of these two metals are isostructural, the corresponding bromomaltol complexes are strikingly different with respect to ligand orientation about the metal ion: All complexes exhibit trigonal dodecahedral coordination geometry but the Ce(IV)-bromomaltol complex displays an uncommon ligand arrangement not mirrored in the Pu(IV) complex, although the two metal species are generally accepted to be structural analogs.
Date: February 12, 2008
Creator: Laboratory, Lawrence Berkeley National; Raymond, Kenneth; Szigethy, Geza; Xu, Jide; Gorden, Anne E.V.; Teat, Simon J. et al.
System: The UNT Digital Library
Spatial resolution limits for synchrotron-based spectromicroscopy in the mid- and near-infrared (open access)

Spatial resolution limits for synchrotron-based spectromicroscopy in the mid- and near-infrared

Spatial resolution tests were performed on beamline 1.4.4 at the Advanced Light Source in Berkeley, CA, USA, a third-generation synchrotron light source. This beamline couples the high-brightness synchrotron source to a Thermo-Electron Continumum XL infrared microscope. Two types of resolution tests were performed in both the mid-IR and near-IR. The results are compared with a diffraction-limited spot size theory. At shorter near-IR wavelengths the experimental results begin to deviate from diffraction-limited so a combined diffraction-limit and electron-beam-source-size model is employed. This description shows how the physical electron beam size of the synchrotron source begins to dominate the focused spot size at higher energies. The transition from diffraction-limited to electron-beam-size-limited performance is a function of storage-ring parameters and the optical demagnification within the beamline and microscope optics. The discussion includes how different facilities, beamlines and microscopes will affect the achievable spatial resolution. As synchrotron light sources and other next-generation accelerators such as energy-recovery LINACs and free-electron lasers achieve smaller beam emittances, beta-functions and/or energy spreads, diffraction-limited performance can continue to higher-energy beams, perhaps ultimately into the extreme ultraviolet.
Date: January 12, 2008
Creator: Levenson, Erika; Lerch, Philippe & Martin, Michael C.
System: The UNT Digital Library
AdS/QCD and Its Holographic Light-Front Partonic Representation (open access)

AdS/QCD and Its Holographic Light-Front Partonic Representation

Starting from the Hamiltonian equation of motion in QCD we find a single variable light-front equation for QCD which determines the eigenspectrum and the light-front wavefunctions of hadrons for general spin and orbital angular momentum. This light-front wave equation is equivalent to the equations of motion which describe the propagation of spin-J modes on anti-de Sitter (AdS) space.
Date: November 12, 2008
Creator: de Teramond, Guy F. & Brodsky, Stanley J.
System: The UNT Digital Library
Integrated Ecogenomics Study for Bioremediation of Cr(VI) at Hanford 100H Area (open access)

Integrated Ecogenomics Study for Bioremediation of Cr(VI) at Hanford 100H Area

Hexavalent chromium is a widespread contaminant found in groundwater. In order to stimulate microbially mediated Cr(VI)-reduction, a poly-lactate compound was injected into Cr(VI)-contaminated aquifers at site 100H at Hanford. Investigation of bacterial community composition using high-density DNA microarray analysis of 16S rRNA gene products revealed a stimulation of Pseudomonas, Desulfovibrio and Geobacter species amongst others. Enrichment of these organisms coincided with continued Cr(VI) depletion. Functional gene-array analysis of DNA from monitoring well indicated high abundance of genes involved in nitrate-reduction, sulfate-reduction, iron-reduction, methanogenesis, chromium tolerance/reduction. Clone-library data revealed Psedomonas was the dominant genus in these samples. Based on above results, we conducted lab investigations to study the dominant anaerobic culturable microbial populations present at this site and their role in Cr(VI)-reduction. Enrichments using defined anaerobic media resulted in isolation of an iron-reducing, a sulfate-reducing and a nitrate-reducing isolate among several others. Preliminary 16S rDNA sequence analysis identified the isolates as Geobacter metallireducens, Pseudomonas stutzeri and Desulfovibrio vulgaris species respectively. The Pseudomonas isolate utilized acetate, lactate, glycerol and pyruvate as alternative carbon sources, and reduced Cr(VI). Anaerobic washed cell suspension of strain HLN reduced almost 95?M Cr(VI) within 4 hr. Further, with 100?M Cr(VI) as sole electron-acceptor, cells grew to 4.05 …
Date: August 12, 2008
Creator: Chakraborty, Romy & Chakraborty, Romy
System: The UNT Digital Library
The Nature of the Dissociation Sites of Hydrogen Molecules on Ru(001) (open access)

The Nature of the Dissociation Sites of Hydrogen Molecules on Ru(001)

Scanning tunneling microscopy (STM) was used to study the dissociative adsorption of H{sub 2} on Ru(001) near saturation coverage, when the number of residual hydrogen vacancies (i.e., unoccupied Ru sites) is small. We found that H{sub 2} dissociation takes place only on Ru sites where the metal atom is not bound to any H atom. Such active sites are formed when at least 3 H-vacancies aggregate by thermal diffusion. Sites formed by single H-vacancies or pairs of adjoining vacancies were found to be unreactive toward H{sub 2}. As a similar phenomenon was found previously on Pd(111), the present results indicate that the active sites for H2 dissociation share a common characteristic among catalytically active transition metals.
Date: March 12, 2008
Creator: Salmeron, Miquel; Rose, Franck; Tartakhanov, Mous; Fomin, Evgeni & Salmeron, Miquel
System: The UNT Digital Library