Due to the long duration required to perform manual knowledge entry by human knowledge engineers it is desirable to find methods to automatically acquire knowledge about the world by accessing online information. In this work I examine using the Cyc ontology to guide the creation of Naïve Bayes classifiers to provide knowledge about items described in Wikipedia articles. Given an initial set of Wikipedia articles the system uses the ontology to create positive and negative training sets for the classifiers in each category. The order in which classifiers are generated and used to test articles is also guided by the ontology. The research conducted shows that a system can be created that utilizes statistical text classification methods to extract information from an ad-hoc generated information source like Wikipedia for use in a formal semantic ontology like Cyc. Benefits and limitations of the system are discussed along with future work.

Modern high performance computing is dependent on parallel processing systems. Most current benchmarks reveal only the high level computational throughput metrics, which may be sufficient for single processor systems, but can lead to a misrepresentation of true system capability for parallel systems. A new benchmark is therefore proposed. CLUE (Cluster Evaluator) uses a cellular automata algorithm to evaluate the scalability of parallel processing machines. The benchmark also uses algorithmic variations to evaluate individual system components' impact on the overall serial fraction and efficiency. CLUE is not a replacement for other performance-centric benchmarks, but rather shows the scalability of a system and provides metrics to reveal where one can improve overall performance. CLUE is a new benchmark which demonstrates a better comparison among different parallel systems than existing benchmarks and can diagnose where a particular parallel system can be optimized.

Wireless sensor networks are battery-powered ad-hoc networks in which sensor nodes that are scattered over a region connect to each other and form multi-hop networks. These nodes are equipped with sensors such as temperature sensors, pressure sensors, and light sensors and can be queried to get the corresponding values for analysis. However, since they are battery operated, care has to be taken so that these nodes use energy efficiently. One of the areas in sensor networks where an energy analysis can be done is routing. This work explores grid-based coordinated routing in wireless sensor networks and compares the energy available in the network over time for different grid sizes.

The emerging interests in spatial pattern mining leads to the demand for a flexible spatial pattern mining language, on which easy to use and understand visual pattern language could be built. It is worthwhile to define a pattern mining language called LCSPM to allow users to specify complex spatial patterns. I describe a proposed pattern mining language in this paper. A visual interface which allows users to specify the patterns visually is developed. Visual pattern queries are translated into the LCSPM language by a parser and data mining process can be triggered afterwards. The visual language is based on and goes beyond the visual language proposed in literature. I implemented a prototype system based on the open source JUMP framework.

Susceptibles-infectives-removals (SIR) and its derivatives are the classic mathematical models for the study of infectious diseases in epidemiology. In order to model and simulate epidemics of an infectious disease, a global stochastic field simulation paradigm (GSFS) is proposed, which incorporates geographic and demographic based interactions. The interaction measure between regions is a function of population density and geographical distance, and has been extended to include demographic and migratory constraints. The progression of diseases using GSFS is analyzed, and similar behavior to the SIR model is exhibited by GSFS, using the geographic information systems (GIS) gravity model for interactions. The limitations of the SIR and similar models of homogeneous population with uniform mixing are addressed by the GSFS model. The GSFS model is oriented to heterogeneous population, and can incorporate interactions based on geography, demography, environment and migration patterns. The progression of diseases can be modeled at higher levels of fidelity using the GSFS model, and facilitates optimal deployment of public health resources for prevention, control and surveillance of infectious diseases.

Many human papilloma virus (HPV) types are sexually transmitted and HPV DNA types 16, 18, 31, and 45 account for more than 75% if all cervical dysplasia. Candidate vaccines are successfully completing US Federal Drug Agency (FDA) phase III testing and several drug companies are in licensing arbitration. Once this vaccine become available it is unlikely that 100% vaccination coverage will be probable; hence, the need for vaccination strategies that will have the greatest reduction on the endemic prevalence of HPV. This thesis introduces two discrete-time models for evaluating the effect of demographic-biased vaccination strategies: one model incorporates temporal demographics (i.e., age) in population compartments; the other non-temporal demographics (i.e., race, ethnicity). Also presented is an intuitive Web-based interface that was developed to allow the user to evaluate the effects on prevalence of a demographic-biased intervention by tailoring the model parameters to specific demographics and geographical region.

The classifier discussed in this thesis considers the path traversed by an email (instead of its content) and reputation of the relays, features inaccessible to spammers. Groups of spammers and individual behaviors of a spammer in a given domain were analyzed to yield association patterns, which were then used to identify similar spammers. Unsolicited and phishing emails were successfully isolated from legitimate emails, using analysis results. Spammers and phishers are also categorized into serial spammers/phishers, recent spammers/phishers, prospective spammers/phishers, and suspects. Legitimate emails and trusted domains are classified into socially close (family members, friends), socially distinct (strangers etc), and opt-outs (resolved false positives and false negatives). Overall this classifier resulted in far less false positives when compared to current filters like SpamAssassin, achieving a 98.65% precision, which is well comparable to the precisions achieved by SPF, DNSRBL blacklists.

Natural language interfaces to databases (NLIDB) are systems that aim to bridge the gap between the languages used by humans and computers, and automatically translate natural language sentences to database queries. This thesis proposes a novel approach to NLIDB, using graph-based models. The system starts by collecting as much information as possible from existing databases and sentences, and transforms this information into a knowledge base for the system. Given a new question, the system will use this knowledge to analyze and translate the sentence into its corresponding database query statement. The graph-based NLIDB system uses English as the natural language, a relational database model, and SQL as the formal query language. In experiments performed with natural language questions ran against a large database containing information about U.S. geography, the system showed good performance compared to the state-of-the-art in the field.

One of the problems sensor networks face is adversaries corrupting nodes along the path to the base station. One way to reduce the effect of these attacks is multipath routing. This introduces some intrusion-tolerance in the network by way of redundancy but at the cost of a higher power consumption by the sensor nodes. Erasure coding can be applied to this scenario in which the base station can receive a subset of the total data sent and reconstruct the entire message packet at its end. This thesis uses two commonly used encodings and compares their performance with respect to power consumed for unencoded data in multipath routing. It is found that using encoding with multipath routing reduces the power consumption and at the same time enables the user to send reasonably large data sizes. The experiments in this thesis were performed on the Tiny OS platform with the simulations done in TOSSIM and the power measurements were taken in PowerTOSSIM. They were performed on the simple radio model and the lossy radio model provided by Tiny OS. The lossy radio model was simulated with distances of 10 feet, 15 feet and 20 feet between nodes. It was found that by …

Language can sometimes be an impediment in communication. Whether we are talking about people who speak different languages, students who are learning a new language, or people with language disorders, the understanding of linguistic representations in a given language requires a certain amount of knowledge that not everybody has. In this thesis, we propose "translation through pictures" as a means for conveying simple pieces of information across language barriers, and describe a system that can automatically generate pictorial representations for simple sentences. Comparative experiments conducted on visual and linguistic representations of information show that a considerable amount of understanding can be achieved through pictorial descriptions, with results within a comparable range of those obtained with current machine translation techniques. Moreover, a user study conducted around the pictorial translation system reveals that users found the system to generally produce correct word/image associations, and rate the system as interactive and intelligent.

Partial order planning is an important approach that solves planning problems without completely specifying the orderings between the actions in the plan. This property provides greater flexibility in executing plans; hence making the partial order planners a preferred choice over other planning methodologies. However, in order to find partially ordered plans, partial order planners perform a search in plan space rather than in space of world states and an uninformed search in plan space leads to poor efficiency. In this thesis, I discuss applying a reinforcement learning method, called First-visit Monte Carlo method, to partial order planning in order to design agents which do not need any training data or heuristics but are still able to make informed decisions in plan space based on experience. Communicating effectively with the agent is crucial in reinforcement learning. I address how this task was accomplished in plan space and the results from an evaluation of a blocks world test bed.