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Co-localization of L-Phenylalanine Ammonia-Lyase and Cinnamate 4-Hydroxylase for Metabolic Channeling in Phenylpropanoid Biosynthesis (open access)

Co-localization of L-Phenylalanine Ammonia-Lyase and Cinnamate 4-Hydroxylase for Metabolic Channeling in Phenylpropanoid Biosynthesis

Article on the co-localization of L-phenylalanine ammonia-lyase and cinnamate 4-hydroxylase for metabolic channeling in phenylpropanoid biosynthesis.
Date: November 2004
Creator: Achnine, Lahoucine; Blancaflor, Elison B.; Rasmussen, Susanne & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Role of ribosomal RNA released from red cells in blood coagulation in zebrafish and humans (open access)

Role of ribosomal RNA released from red cells in blood coagulation in zebrafish and humans

This article identifies that an rRNA released in hemolysis activates clotting in human and zebrafish plasma. Furthermore, it shows that fish Hgfac plays a role in rRNA-mediated activation of coagulation.
Date: November 17, 2021
Creator: Alharbi, Abdulmajeed; Iyer, Neha; Al Qaryoute, Ayah; Raman, Revathi; Burks, David J.; Azad, Rajeev K. et al.
Object Type: Article
System: The UNT Digital Library
Using Machine Learning to Predict Genes Underlying Differentiation of Multipartite and Unipartite Traits in Bacteria (open access)

Using Machine Learning to Predict Genes Underlying Differentiation of Multipartite and Unipartite Traits in Bacteria

Article describes how, since the discovery of the second chromosome in the Rhodobacter spaeroides 2.4.1 in 1989 and the revelation of gene sequences, multipartite genomes have been reported in over three hundred bacterial species under nine different phyla. In this study, the authors have attempted to leverage machine learning as a means to identify the genetic factors that underlie the differentiation of bacteria with multipartite and unipartite genomes.
Date: November 13, 2023
Creator: Almalki, Fatemah; Sunuwar, Janak & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
CaMV35S promoter – A plant biology and biotechnology workhorse in the era of synthetic biology (open access)

CaMV35S promoter – A plant biology and biotechnology workhorse in the era of synthetic biology

This review article calls for establishing the CaMV 35S promoter as a quantitative reference standard for transcription activity in plants.
Date: November 18, 2020
Creator: Amack, Stephanie C. & Antunes, Mauricio S.
Object Type: Article
System: The UNT Digital Library
Diabetes Treatment with Sunshine captions transcript

Diabetes Treatment with Sunshine

Video from the Fall 2018 3 Minute Thesis (3MT®) Final Competition. In this video, Sujata Argawal presents her research methods, findings, and its significance in non-technical language.
Date: November 17, 2018
Creator: Argawal, Sujata
Object Type: Video
System: The UNT Digital Library
A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick) (open access)

A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick)

This article involves mapping the probability of occurrence that the disease vector exists in the environment, mapping the incidence of Lyme disease in the human population and examining the spatial concordance between the probability map and incidence map.
Date: November 1, 2014
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
Object Type: Article
System: The UNT Digital Library
Modelling spatial concordance between Rocky Mountain spotted fever disease incidence and habitat probability of its vector Dermacentor variabilis (American dog tick) (open access)

Modelling spatial concordance between Rocky Mountain spotted fever disease incidence and habitat probability of its vector Dermacentor variabilis (American dog tick)

This article reports on the development and comparison of two maps of Texas related to Rocky Mountain spotted fever.
Date: November 1, 2012
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
Object Type: Article
System: The UNT Digital Library
Functional and Phylogenetic Analyses of a Conserved Regulatory Program in the Phloem of Minor Veins (open access)

Functional and Phylogenetic Analyses of a Conserved Regulatory Program in the Phloem of Minor Veins

This article discusses functional and phylogenetic analyses of a conserved regulatory program in the phloem of minor veins, which are developmentally and physiologically distinct from the phloem in the rest of the vascular system.
Date: November 2003
Creator: Ayre, Brian G.; Blair, Jaime E. & Turgeon, Robert
Object Type: Article
System: The UNT Digital Library
Editorial: Biofuels and Bioenergy (open access)

Editorial: Biofuels and Bioenergy

Editorial on the research topic of biofuels and bioenergy.
Date: November 30, 2020
Creator: Barros-Rios, Jaime; Zhang, Jin & Lu, Mengzhu
Object Type: Article
System: The UNT Digital Library
Silicon versus Superbug: Assessing Machine Learning's Role in the Fight against Antimicrobial Resistance (open access)

Silicon versus Superbug: Assessing Machine Learning's Role in the Fight against Antimicrobial Resistance

Article describes how, in his 1945 Nobel Prize acceptance speech, Sir Alexander Fleming warned of antimicrobial resistance (AMR) if the necessary precautions were not taken diligently. This paper explores the applications of ML in predicting and understanding AMR, highlighting its potential in revolutionizing healthcare practices.
Date: November 8, 2023
Creator: Coxe, Tallon & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
A gene network-driven approach to infer novel pathogenicity-associated genes: application to Pseudomonas aeruginosa PAO1 (open access)

A gene network-driven approach to infer novel pathogenicity-associated genes: application to Pseudomonas aeruginosa PAO1

Article describes how within the genome of a pathogen is the information regarding factors responsible for its pathogenicity. the authors of the article developed a novel pipeline that uses standard protocol in combination with gene co-expression network of a pathogen constructed using publicly available RNA-Seq data sets.
Date: November 3, 2023
Creator: De, Ronika; Whiteley, Marvin & Aza, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Vanillin Biosynthesis - Not as Simple as it Seem? (open access)

Vanillin Biosynthesis - Not as Simple as it Seem?

Book chapter on vanillin biosynthesis. The author gives an introduction to vanillin biosynthesis, the multiple pathways to vanillin, and the way forward.
Date: November 23, 2010
Creator: Dixon, R. A.
Object Type: Book Chapter
System: The UNT Digital Library
Proanthocyanidins - a final frontier in flavonoid research? (open access)

Proanthocyanidins - a final frontier in flavonoid research?

Article on proanthocyanidins -- a final frontier in flavonoid research?
Date: November 2, 2004
Creator: Dixon, R. A.; Xie, De-Yu & Sharma, Shashi B.
Object Type: Article
System: The UNT Digital Library
Lipid Droplets: Packing Hydrophobic Molecules Within the Aqueous Cytoplasm (open access)

Lipid Droplets: Packing Hydrophobic Molecules Within the Aqueous Cytoplasm

Article discusses how lipid droplets, also known as oil bodies or lipid bodies, are plant organelles that compartmentalize neutral lipids as a hydrophobic matrix covered by proteins embedded in a phospholipid monolayer. The authors review the growing body of knowledge about lipid droplets in plant cells, describe the evolutionary similarity and divergence in their associated subcellular machinery, and point to gaps that deserve future attention.
Date: November 22, 2022
Creator: Guzha, Athanas; Whitehead, Payton; Ischebeck, Till & Chapman, Kent Dean
Object Type: Article
System: The UNT Digital Library
Control of Root Architecture and Nodulation by the LATD/NIP Transporter (open access)

Control of Root Architecture and Nodulation by the LATD/NIP Transporter

Article discussing research on control of root architecture and nodulation by the LATD/NIP transporter.
Date: November 2010
Creator: Harris, Jeanne M. & Dickstein, Rebecca
Object Type: Article
System: The UNT Digital Library
Muconic acid production from methane using rationally-engineered methanotrophic biocatalysts (open access)

Muconic acid production from methane using rationally-engineered methanotrophic biocatalysts

Article demonstrates bioconversion of methane to muconic acid, a dicarboxylic acid that can be upgraded to an array of platform chemicals, by three gammaproteobacterial methanotrophs.
Date: November 25, 2019
Creator: Henard, Calvin A.; Akberdin, Ilya R.; Kalyuzhnaya, Marina G. & Guarnieri, Michael T.
Object Type: Article
System: The UNT Digital Library
Activation of apoptosis in NAF-1-deficient human epithelial breast cancer cells (open access)

Activation of apoptosis in NAF-1-deficient human epithelial breast cancer cells

This article shows that small hairpin RNA-mediated suppresion of NAF-1 results in the activation of apoptosis in epithelial breast cancer cells and xenograft tumors.
Date: November 11, 2015
Creator: Holt, Sarah H.; Darash-Yahana, Merav; Sohn, Yang Sung; Song, Luhua; Karmi, Ola; Tamir, Sagi et al.
Object Type: Article
System: The UNT Digital Library
How Tiny Zebrafish and Their Surprisingly Human-Like Genome Can Benefit Medical Research captions transcript

How Tiny Zebrafish and Their Surprisingly Human-Like Genome Can Benefit Medical Research

Presentation highlighting the use of zebrafish to identify genes relating to predisposition to thromboembolism and cardiovascular disease in people with African ancestry. It was presented at the UNT Transdisciplinary Conference on Ancestral Genomics Research which was held virtually on November 20-21, 2020.
Date: November 21, 2020
Creator: Jagadeeswaran, Pudur
Object Type: Video
System: The UNT Digital Library
Zebrafish Genetics: Functional Genomics captions transcript

Zebrafish Genetics: Functional Genomics

Video recording of Dr. Pudur Jagadeeswaran's presentation, "Zebrafish Genetics: Functional Genomics." It focuses on blood coagulation pathways in studying functional genomics. It was presented at the Transdisciplinary Ancestral Genomic Research Investigations (TAGRI) II Conference held online November 5-6, 2021.
Date: November 5, 2021
Creator: Jagadeeswaran, Pudur
Object Type: Video
System: The UNT Digital Library
Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes (open access)

Deciphering pathogenicity and antibiotic resistance islands in methicillin-resistant Staphylococcus aureus genomes

This article explores the use of an information-entropy-based gene clustering method for genomic island detection in MRSA.
Date: November 16, 2017
Creator: Jani, Mehul; Sengupta, Soham; Hu, Kelsey & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Gray Wolf Exposure to Emerging Vector-Borne Diseases in Wisconsin with Comparison to Domestic Dogs and Humans (open access)

Gray Wolf Exposure to Emerging Vector-Borne Diseases in Wisconsin with Comparison to Domestic Dogs and Humans

This article contains the evaluation of temporal and geographic patterns of exposure to these four vector-borne diseases in Wisconsin as the Gray Wolf population expanded between 1985 and 2011.
Date: November 29, 2016
Creator: Jara Miller, Rocio F.; Wydeven, Adrian P. & Samuel, Michael D.
Object Type: Article
System: The UNT Digital Library
Were domestic camelids present on the prehispanic South American agricultural frontier? An ancient DNA study (open access)

Were domestic camelids present on the prehispanic South American agricultural frontier? An ancient DNA study

Article testing the hypothesis that domesticated camelids occurred in prehispanic, southern Mendoza through analysis of ancient DNA.
Date: November 5, 2020
Creator: Johnson, Jeff A.; Kim, Tracy; Wolverton, Steven J.; Gil, Adolfo Fabian; Abbona, Cinthia Carolina & Adolfo, Gustavo Neme
Object Type: Article
System: The UNT Digital Library
The Use of Genetics for the Management of a Recovering Population: Temporal Assessment of Migratory Peregrine Falcons in North America (open access)

The Use of Genetics for the Management of a Recovering Population: Temporal Assessment of Migratory Peregrine Falcons in North America

Article on the use of genetics for the management of a recovering population and a temporal assessment of migratory peregrine falcons in North America.
Date: November 18, 2010
Creator: Johnson, Jeff A.; Talbot, Sandra Looman; Sage, George K.; Burnham, Kurt K.; Brown, Joseph W.; Maechtle, Tom L. et al.
Object Type: Article
System: The UNT Digital Library
C. Elegans and Mutants With Chronic Nicotine Exposure as a Novel Model of Cancer Phenotype (open access)

C. Elegans and Mutants With Chronic Nicotine Exposure as a Novel Model of Cancer Phenotype

This article provides evidence in support of C. elegans as initial in vivo model to study nicotine and its effects on oncogenic mutations identified in humans.
Date: November 17, 2015
Creator: Kanteti, Rajani; Dhanasingh, Immanuel; El-Hashani, Essam; Riehm, Jacob J.; Stricker, Thomas; Nagy, Stanislav et al.
Object Type: Article
System: The UNT Digital Library