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4-Coumarate 3-hydroxylase in the lignin biosynthesis pathway is a cytosolic ascorbate peroxidase (open access)

4-Coumarate 3-hydroxylase in the lignin biosynthesis pathway is a cytosolic ascorbate peroxidase

Article describes an enzyme catalyzing the direct 3-hydroxylation of 4-coumarate to caffeate in lignin biosynthesis as a bifunctional peroxidase that oxidizes both ascorbate and 4-coumarate at comparable rates.
Date: April 30, 2019
Creator: Barros, Jaime; Escamilla-Treviño, Luis; Song, Luhua; Rao, Xiaolan; Serrani-Yarce, Juan Carlos; Docampo-Palacios, Maite et al.
Object Type: Article
System: The UNT Digital Library
Acetaldehyde oxidation at elevated pressure (open access)

Acetaldehyde oxidation at elevated pressure

A detailed chemical kinetic model for oxidation of CH3CHO at intermediate to high temperature and elevated pressure has been developed and evaluated by comparing predictions to novel high-pressure flow reactor experiments as well as shock tube ignition delay measurements and jet-stirred reactor data from literature. The flow reactor experiments were conducted with a slightly lean CH3CHO/O2 mixture highly diluted in N2 at 600–900 K and pressures of 25 and 100 bar. This is the accepted manuscript version of the published article.
Date: April 10, 2021
Creator: Hashemi, Hamid; Christensen, Jakob M.; Marshall, Paul & Glarborg, Peter
Object Type: Article
System: The UNT Digital Library
Analysis of the potential behavioral impact of methanol when used as a solvent: Dataset from zebrafish (Danio rerio) behavioral research (open access)

Analysis of the potential behavioral impact of methanol when used as a solvent: Dataset from zebrafish (Danio rerio) behavioral research

This article is a dataset that describes behavioral results in zebrafish (Danio rerio) individually exposed to methanol, a solvent which is capable of altering physiology and behavior high concentrations.
Date: April 1, 2021
Creator: Hamilton, Trevor J.; Szaszkiewicz, Joshua; Krook, Jeffrey & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
The Arabidopsis gene co-expression network (open access)

The Arabidopsis gene co-expression network

Article presents an Arabidopsis gene co-expression network constructed using RNA-Seq datasets, which will serve as a useful resource for the Arabidopsis research community to gain insights into Arabidopsis gene interactions and functions.
Date: April 26, 2022
Creator: Burks, David J.; Sengupta, Soham; De, Ronika; Mittler, Ron & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
Arabidopsis thaliana EARLY RESPONSIVE TO DEHYDRATION 7 Localizes to Lipid Droplets via Its Senescence Domain (open access)

Arabidopsis thaliana EARLY RESPONSIVE TO DEHYDRATION 7 Localizes to Lipid Droplets via Its Senescence Domain

This article includes a proteomics analysis of Lipid Droplets (LDs) isolated from drought-stressed Arabidopsis leaves and identifying EARLY RESPONSIVE TO DEHYDRATION 7 (ERD7) as a putative LD protein. Observations provide new insight to ERD7 and the SD-containing family of proteins in plants and suggest that ERD7 may be involved in functional aspects of plant stress response that also include localization to the LD surface.
Date: April 14, 2021
Creator: Doner, Nathan M.; Seay, Damien C.; Mehling, Marina; Sun, Siqi; Gidda, Satinder K.; Schmitt, Kerstin et al.
Object Type: Article
System: The UNT Digital Library
Biocultural Calendars Across Four Ethnolinguistic Communities in Southwestern South America (open access)

Biocultural Calendars Across Four Ethnolinguistic Communities in Southwestern South America

Article describes how, since the mid-20th century, the so-called Great Acceleration has amplified processes of ecosystem degradation, extinction of biological species, displacement of local peoples, losses of languages, and cultural diversity. The authors examine cultural practices and socio-environmental changes across four contrasting ethnolinguistic communities in southwestern South America, from southern to northern Chile along a marked climatic gradient to show the broad application of the concept of biocultural calendars.
Date: April 20, 2023
Creator: Rozzi, Ricardo, 1960-; Álvarez, Ricardo; Castro, Victoria; Núñez, David; Ojeda, Jaime & Tauro, Alejandra
Object Type: Article
System: The UNT Digital Library
Biophotons-and-emergence-of-quantum-coherencea-diffusion-entropy-analysisEntropy (open access)

Biophotons-and-emergence-of-quantum-coherencea-diffusion-entropy-analysisEntropy

This article studies the emission of photons from germinating seeds using an experimental technique designed to detect light of extremely small intensity. It analyzes the dark count signal without germinating seeds as well as the photon emission during the germination process.
Date: April 29, 2021
Creator: Benfatto, Maurizio; Pace, Elisabetta; Curceanu, Catalina; Scordo, Alessandro; Clozza, Alberto; Davoli, Ivan et al.
Object Type: Article
System: The UNT Digital Library
CAREER: Orbital-based Descriptors for Dynamical Properties of Quantum Defects (open access)

CAREER: Orbital-based Descriptors for Dynamical Properties of Quantum Defects

Data management plan for the grant, "CAREER: Orbital-based Descriptors for Dynamical Properties of Quantum Defects."
Date: 2024-04-01/2029-03-31
Creator: Wang, Yuanxi
Object Type: Text
System: The UNT Digital Library
CAS: Highly Interacting Panchromatic Push-Pull Systems: Symmetry Breaking and Quantum Coherence in Electron Transfer (open access)

CAS: Highly Interacting Panchromatic Push-Pull Systems: Symmetry Breaking and Quantum Coherence in Electron Transfer

Data management plan for the grant, "CAS: Highly Interacting Panchromatic Push-Pull Systems: Symmetry Breaking and Quantum Coherence in Electron Transfer."
Date: 2024-04-01/2027-03-31
Creator: Wang, Hong
Object Type: Text
System: The UNT Digital Library
Cellular Plasticity in Response to Suppression of Storage Proteins in the Brassica napus Embryo (open access)

Cellular Plasticity in Response to Suppression of Storage Proteins in the Brassica napus Embryo

Article testing the tradeoff between protein and oil storage in oilseed crops by analyzing the effect of suppressing key genes encoding protein storage products (napin and cruciferin). This study provides mechanistic insights into the intriguing link between lipid and protein storage, which have implications for biotechnological strategies directed at improving oilseed crops.
Date: April 30, 2020
Creator: Rolletschek, Hardy; Schwender, Jorg; König, Christina; Chapman, Kent Dean; Romsdahl, Trevor; Lorenz, Christin et al.
Object Type: Article
System: The UNT Digital Library
Childhood Asthma and Smoking: Moderating Effect of Preterm Status and Birth Weight (open access)

Childhood Asthma and Smoking: Moderating Effect of Preterm Status and Birth Weight

Article exploring the association between second-hand smoke exposure, asthma, and asthma severity in children ages 6-17 as well as the effect of birth weight and prematurity (BWP) on parental smoking and asthma. Results indicate that focused asthma interventions in children should inquire about BWP status as well as parental smoking and household smoke exposure to reduce asthma morbidity and mortality.
Date: April 17, 2021
Creator: Ogbu, Chukwuemeka E.; Ogbu, Stella C.; Khadka, Dibya & Kirby, Russell S.
Object Type: Article
System: The UNT Digital Library
The cisd gene family regulates physiological germline apoptosis through ced-13 and the canonical cell death pathway in Caenorhabditis elegans (open access)

The cisd gene family regulates physiological germline apoptosis through ced-13 and the canonical cell death pathway in Caenorhabditis elegans

This article examines how the disruption of the cisd-1 gene function, using RNA interference (RNAi), or mutant alleles [cisd-1(tm4993) deletion mutant, cisd-1(pnIs27) insertion mutant] led to germline abnormalities including an increase in the number of cell corpses and distal tip cell migration defects.
Date: April 17, 2018
Creator: King, Skylar D.; Gray, Chipo F.; Song, Luhua; Nechushtai, Rachel; Gumienny, Tina L; Mittler, Ron et al.
Object Type: Article
System: The UNT Digital Library
Conference: Dynamical Systems and Fractal Geometry (open access)

Conference: Dynamical Systems and Fractal Geometry

Data management plan for the grant, "Conference: Dynamical Systems and Fractal Geometry."
Date: 2024-04-15/2025-03-31
Creator: Allaart, Pieter C.
Object Type: Text
System: The UNT Digital Library
Connecting Low- and High-redshift Weak Emission-line Quasars via Hubble Space Telescope Spectroscopy of Lyα Emission (open access)

Connecting Low- and High-redshift Weak Emission-line Quasars via Hubble Space Telescope Spectroscopy of Lyα Emission

Article presents ultraviolet spectroscopy covering the Lyα + N v complex of six candidate low-redshift (0.9 < z < 1.5) weak emission-line quasars (WLQs) based on observations with the Hubble Space Telescope.
Date: April 14, 2022
Creator: Paul, Jeremiah D.; Plotkin, Richard M.; Shemmer, Ohad; Anderson, Scott F.; Brandt, W. N.; Fan, Xiaohui et al.
Object Type: Article
System: The UNT Digital Library
Contribution of active atrial contraction to cardiac output in anesthetized American alligators (Alligator mississippiensis) (open access)

Contribution of active atrial contraction to cardiac output in anesthetized American alligators (Alligator mississippiensis)

Article describes study which investigated the importance of atrial contraction in filling of the ventricle in American alligators (Alligator mississippiensis) by bypassing both atria (with the use of ligatures to prevent atrial filling) and measuring the resultant effects on cardiac output in anesthetized animals.
Date: April 30, 2018
Creator: Williams, Joyce E.; Crossley, Janna; Elsey, Ruth M.; Wang, Tobias & Crossley, Dane A., II
Object Type: Article
System: The UNT Digital Library
Correction: Role of novel histone modifications in cancer (open access)

Correction: Role of novel histone modifications in cancer

Correction to the article "Role of novel histone modifications in cancer".
Date: April 10, 2018
Creator: Shanmugam, Muthu K.; Arfuso, Frank; Arumugam, Surendar; Chinnathambi, Arunachalam; Jinsong, Bian; Warrier, Sudha R. et al.
Object Type: Article
System: The UNT Digital Library
CRISPR/Cas9-Induced fad2 and rod1 Mutations Stacked With fae1 Confer High Oleic Acid Seed Oil in Pennycress (Thlaspi arvense L.) (open access)

CRISPR/Cas9-Induced fad2 and rod1 Mutations Stacked With fae1 Confer High Oleic Acid Seed Oil in Pennycress (Thlaspi arvense L.)

Article utilizing Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas9 technology to produce knockout mutations in the FATTY ACID DESATURASE2 (FAD2) and REDUCED OLEATE DESATURATION1 (ROD1) genes to increase oleic acid content in Pennycress (Thlaspi arvense L.). Results suggest that combinatorial knockout of ROD1 and FAE1 may be a viable route to commercially increase oleic acid content in pennycress seed oil whereas mutations in FAD2 will likely require at least partial function to avoid fitness trade-offs.
Date: April 22, 2021
Creator: Jarvis, Brice A.; Romsdahl, Trevor B.; McGinn, Michaela G.; Nazarenus, Tara J.; Cahoon, Edgar B.; Chapman, Kent Dean et al.
Object Type: Article
System: The UNT Digital Library
Current Models for Transcriptional Regulation of Secondary Cell Wall Biosynthesis in Grasses (open access)

Current Models for Transcriptional Regulation of Secondary Cell Wall Biosynthesis in Grasses

This article reviews current advances in secondary cell wall regulation in grasses, and discusses the commonalities and the differences between grasses and dicots.
Date: April 4, 2018
Creator: Rao, Xiaolan & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
A cytoskeletal function for PBRM1 reading methylated microtubules (open access)

A cytoskeletal function for PBRM1 reading methylated microtubules

This article shows that that the coordinated read-write activity of the epigenetic machinery extends to the cytoskeleton, with PBRM1 in the PBAF chromatin remodeling complex reading microtubule methyl marks written by the SETD2 histone methyltransferase. This article opens a previously unknown window into how chromatin remodeler defects can drive disease via both epigenetic and cytoskeletal dysfunction.
Date: April 2, 2021
Creator: Karki, Menuka; Jangid, Rahul K.; Anish, Ramakrishnan; Seervai, Riyad N. H.; Bertocchio, Jean-Phillipe; Hotta, Takashi et al.
Object Type: Article
System: The UNT Digital Library
Data on whole length myosin binding protein C stabilizes myosin S2 as measured by gravitational force spectroscopy (open access)

Data on whole length myosin binding protein C stabilizes myosin S2 as measured by gravitational force spectroscopy

This article relates to the research article entitled "Whole length myosin binding protein C stabilized myosin subfragment-2 (s2) flexibility as measured by gravitational force spectroscopy" (Singh et al., 2018) [1]. The data exhibited the purified skeletal myosin binding protein (MyBPC) from rabbit back muscle was of slow skeletal type confirmed by chromatography and in unphosphorylated state based on its isoelectric point (pI) by chromatofocussing.
Date: December 4, 2017
Creator: Singh, Rohit R.; Dunn, James W.; Qadan, Motamed M.; Hall, Nakiuda; Wang, Kathy K. & Root, Douglas D.
Object Type: Article
System: The UNT Digital Library
Development of micro-electrode array based tests for neurotoxicity: assessment of interlaboratory reproducibility with neuroactive chemicals (open access)

Development of micro-electrode array based tests for neurotoxicity: assessment of interlaboratory reproducibility with neuroactive chemicals

Article evaluating the response to the pharmacological compounds Fluoxetine, Muscimol, and Verapamil in primary neuronal cultures. Final conclusions are drawn that MEA technology has a potential for standard in vitro neurotoxicity/neuropharmacology evaluation.
Date: April 27, 2011
Creator: Novellino, A.; Scelfo, Bibiana; Palosaari, T.; Price, A.; Sobanski, Tomasz; Shafer, T.J. et al.
Object Type: Article
System: The UNT Digital Library
Dietary Exposure to Low Levels of Crude Oil Affects Physiological and Morphological Phenotype in Adults and Their Eggs and Hatchlings of the King Quail (Coturnix chinensis) (open access)

Dietary Exposure to Low Levels of Crude Oil Affects Physiological and Morphological Phenotype in Adults and Their Eggs and Hatchlings of the King Quail (Coturnix chinensis)

Article studying the king quail as an animal model to determine if chronic dietary exposure to crude oil in a parental population affects morpho-physiological phenotypic variables in their immediate offspring generation.
Date: April 9, 2021
Creator: Bautista, Naim M.; Do Amaral-Silva, Lara; Dzialowski, Edward M. (Edward Michael) & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Discovery of higher-order topological insulators using the spin Hall conductivity as a topology signature (open access)

Discovery of higher-order topological insulators using the spin Hall conductivity as a topology signature

This article shows a connection between spin Hall effect and HOTIs using a combination of ab initio calculations and tight-binding modeling. The model demonstrates how a non-zero bulk midgap spin Hall conductivity (SHC) emerges within the HOTI phase. This work guides novel experimental and theoretical advances towards higher-order topological insulator realization and applications.
Date: April 12, 2021
Creator: Costa, Marcio; Mera Acosta, Carlos; Padilha, Antonio C.M.; Cerasoli, Frank T.; Buongiorno Nardelli, Marco & Fazzio, Adalberto
Object Type: Article
System: The UNT Digital Library
Does the left aorta provide proton-rich blood to the gut when crocodilians digest a meal? (open access)

Does the left aorta provide proton-rich blood to the gut when crocodilians digest a meal?

Article measuring blood parameters in the left aortae and atria of crocodilians. The findings do not support the hypothesis that a R–L shunt serves to deliver CO2 for the gastrointestinal system after feeding in crocodilians.
Date: February 4, 2019
Creator: Conner, Justin L.; Crossley, Janna; Elsey, Ruth M.; Nelson, Derek; Wang, Tobias & Crossley, Dane A., II
Object Type: Article
System: The UNT Digital Library