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Evaluation of pathways to the C-glycosyl isoflavone puerarin in roots of kudzu (Pueraria montana lobata)
Article describes how kudzu produces both O- and C-glycosylated isoflavones, with puerarin (C-glucosyl daidzein) as an important bioactive compound. The authors go on to explain how expression of recombinant UGTs in Escherichia coli and candidate C-glycosyltransferases in Medicago truncatula were used to explore substrate specificities, and gene silencing of UGT and key isoflavone biosynthetic genes in kudzu hairy roots employed to test hypotheses concerning the substrate(s) for C-glycosylation.
Date:
September 2, 2022
Creator:
Adolfo, Laci M.; Burks, David J.; Rao, Xiaolan; Alvarez-Hernandez, Anislay & Dixon, R. A.
Object Type:
Article
System:
The UNT Digital Library
Identification of Pueraria spp. through DNA barcoding and comparative transcriptomics
This article presents research where various kudzu accessions were analyzed through barcoding and comparative transcriptomics, generating tools for identification and molecular pathway analysis.
Date:
January 3, 2022
Creator:
Adolfo, Laci M.; Rao, Xiaolan & Dixon, R. A.
Object Type:
Article
System:
The UNT Digital Library
Opposing effects of MYZUS PERSICAE-INDUCED LIPASE 1 and jasmonic acid influence the outcome of Arabidopsis thaliana–Fusarium graminearum interaction
Article presents research that shows Arabidopsis MYZUS PERSICAE-INDUCED LIPASE 1 (MPL1), via its influence on limiting jasmonic acid (JA) accumulation, restricts Fusarium graminearum (Fg) infection.
Date:
April 9, 2022
Creator:
Alam, Syeda T.; Sarowar, Sujon; Mondal, Hossain A.; Makandar, Ragiba; Chowdhury, Zulkarnain; Louis, Joe et al.
Object Type:
Article
System:
The UNT Digital Library
Expression of AtWRI1 and AtDGAT1 during soybean embryo development influences oil and carbohydrate metabolism
Article evaluating the metabolic and transcriptional responses to AtWRI1 and AtDGAT1 expression in soybean seeds.
Date:
March 20, 2022
Creator:
Arias, Cintia Lucía; Quach, Truyen; Huynh, Tu; Nguyen, Hanh; Moretti, Ademar; Shi, Yu et al.
Object Type:
Article
System:
The UNT Digital Library
Cascading effects of COVID-19 on population mobility and air quality: An exploration including place characteristics using geovisualization
Article examining the population mobility and air quality before and after the lockdown (mandated restriction of activity) during the public health response to COVID-19. This article is part of the Special Issue on COVID-19.
Date:
January 22, 2022
Creator:
Atkinson, Samuel F.; Kala, Abhishek K. & Tiwari, Chetan
Object Type:
Article
System:
The UNT Digital Library
Proteomic and metabolic disturbances in lignin-modified Brachypodium distachyon
This article investigates global metabolic responses to lignin pathway perturbations in the model grass Brachypodium distachyon using a systems biology approach.
Date:
June 7, 2022
Creator:
Barros, Jaime; Shrestha, Him K.; Serrani-Yarce, Juan C.; Engle, Nancy L.; Abraham, Paul E.; Tschaplinski, Timothy J. et al.
Object Type:
Article
System:
The UNT Digital Library
Physiological Regulation of Growth, Hematology and Blood Gases in Chicken Embryos in Response to Low and High Incubation Humidity
Article examining effects of Low relative humidity (25–35%), and High relative humidity (85–93%) on hatchability, embryonic growth, hematology and blood gases and pH in chicken embryos.
Date:
May 24, 2022
Creator:
Branum, Sylvia R.; Tazawa, Hiroshi & Burggren, Warren W.
Object Type:
Article
System:
The UNT Digital Library
The Arabidopsis gene co-expression network
Article presents an Arabidopsis gene co-expression network constructed using RNA-Seq datasets, which will serve as a useful resource for the Arabidopsis research community to gain insights into Arabidopsis gene interactions and functions.
Date:
April 26, 2022
Creator:
Burks, David J.; Sengupta, Soham; De, Ronika; Mittler, Ron & Azad, Rajeev K.
Object Type:
Article
System:
The UNT Digital Library
Better together: Protein partnerships for lineage-specific oil accumulation
Article reviews recent evidence that protein–protein interactions in each of the three major phases of oil formation appear to have profound effects on specialized oil accumulation. This article is part of the special issue: Physiology and metabolism (2022).
Date:
February 24, 2022
Creator:
Busta, Lucas; Chapman, Kent Dean & Cahoon, Edgar B.
Object Type:
Article
System:
The UNT Digital Library
Case report: Early-onset osteoporosis in a patient carrying a novel heterozygous variant of the WNT1 gene
Article presents a case study of a 35 year-old Caucasian woman who experienced multiple vertebral fractures two months after her second pregnancy. The results suggest a potential role of heterozygous WNT1 variants in the pathogenesis of early-onset osteoporosis. The authors suggest that teriparatide is one of the most appropriate available therapies for such cases.
Date:
August 8, 2022
Creator:
Campopiano, Maria Cristina; Fogli, Antonella; Michelucci, Angela; Mazoni, Laura; Longo, Antonella; Borsari, Simona et al.
Object Type:
Article
System:
The UNT Digital Library
Transcriptome Analysis Uncovers the Gene Expression Profile of Hemileia vastatrix (Race XXXIII) during the Interactions with Resistant and Susceptible Coffee
This article presents research to sequence the transcriptome of H. vastatrix race XXXIII to obtain a database for use as a reference in studies of the interaction between the fungus and coffee. In addition, the authors aim to identify differentially expressed genes that have the potential to act as effector proteins during the interaction.
Date:
December 27, 2021
Creator:
Castro, Isabel Samila Lima; Freitas-Lopes, Rejane do Livramento; de Siqueira Ferreira, Sávio; Maciel, Talles Eduardo Ferreira; Florez, Juan Carlos; Zambolim, Eunize Maciel et al.
Object Type:
Article
System:
The UNT Digital Library
A conserved oxalyl-coenzyme A decarboxylase in oxalate catabolism
Article presents research on oxalate catabolism in plants.
Date:
May 5, 2022
Creator:
Cheng, Ninghui; Paris, Vincent; Rao, Xiaolan; Wang, Xiaoqiang & Nakata, Paul A.
Object Type:
Article
System:
The UNT Digital Library
Larval Development in Tropical Gar (Atractosteus tropicus) Is Dependent on the Embryonic Thermal Regime: Ecological Implications under a Climate Change Context
Article presents research on how temperature affects fish populations. The study shows how changes in temperature may induce craniofacial and morphological alterations in fish during early stages and contribute to understanding the possible effects of global warming in early development of fish and its ecological implications.
Date:
December 14, 2021
Creator:
Cordova-de la Cruz, Simrith E.; Riesco, Marta F.; Martínez-Bautista, Gil; Calzada-Ruiz, Daniel; Martínez-Burguete, Talhia; Peña-Marín, Emyr S. et al.
Object Type:
Article
System:
The UNT Digital Library
Molecular signatures in the progression of COVID-19 severity
Authors of the article discuss that to uncover genes and pathways involved in the differential clinical manifestations of COVID-19 they developed a novel gene co-expression network-based pipeline that uses gene expression obtained from different SARS-CoV-2 infected human tissues. Their study shines a new light on genes and their networks (modules) that drive the progression of COVID-19 from moderate to extremely severe condition, which could aid development of new therapeutics to combat COVID-19.
Date:
December 21, 2022
Creator:
De, Ronika & Azad, Rajeev K.
Object Type:
Article
System:
The UNT Digital Library
Cavity surface residues of PAD4 and SAG101 contribute to EDS1 dimer signaling specificity in plant immunity
Article investigating whether the EPDs of PAD4 and SAG101 contribute to EDS1 dimer functions.
Date:
October 27, 2021
Creator:
Dongus, Joram A.; Bhandari, Deepak D.; Penner, Eva; Lapin, Dmitry; Stolze, Sara C.; Harzen, Anne et al.
Object Type:
Article
System:
The UNT Digital Library
N-acylethanolamide metabolizing enzymes are upregulated in human neural progenitor-derived neurons exposed to sub-lethal oxidative stress
Article is a study determining whether ReN cells, a superior cell model system for studying neurodevelopment, differentiation, and neuroprotection, express proteins involved in canonical eCB NAE signaling and whether oxidative stress can induce their expression. This study is a first step toward determining how oxidative stress affects CB1, CB2, FAAH, NAAA, and NAPE-PLD expression and their potential defense against oxidative stress.
Date:
August 8, 2022
Creator:
Duncan, Scott R.; Riordan, Sean M.; Hall, Conner W.; Payne, Andrew J.; Chapman, Kent Dean & Koulen, Peter
Object Type:
Article
System:
The UNT Digital Library
Thermal Stress Has Minimal Effects on Bacterial Communities of Thermotolerant Symbiodinium Cultures
Article comparing the microbial communities of three isolates from different species of the genus Symbiodinium (formerly known as Symbiodinium clade A) with different ecophysiology, levels of interaction with the animal host, and thermal adaptations. Results suggest that bacteria associated or co-cultured with thermotolerant Symbiodinium might play an important role in thermotolerance.
Date:
May 19, 2022
Creator:
Díaz-Almeyda, Erika M.; Ryba, Tyrone; Ohdera, Aki H.; Shafer, Natali; Link, Caroline; Prado-Zapata, Marcela et al.
Object Type:
Article
System:
The UNT Digital Library
The metabolic cost of turning right side up in the Mediterranean spur-thighed tortoise (Testudo graeca)
Article examining the the metabolic cost of self-righting in the terrestrial Mediterranean spur-thighed tortoise using respirometry and kinematic video analysis and comparing this to the metabolic cost of locomotion at a moderate, easily sustainable speed. The results found that self-righting is, relatively, metabolically expensive and costs around two times the mass-specific power required to walk.
Date:
January 10, 2022
Creator:
Ewart, Heather E.; Tickle, Peter G.; Sellers, William I.; Lambertz, Markus; Crossley, Dane A., II & Codd, Jonathan R.
Object Type:
Article
System:
The UNT Digital Library
Mediterranean Spur-Thighed Tortoises (Testudo graeca) Have Optimal Speeds at Which They Can Minimise the Metabolic Cost of Transport, on a Treadmill
Article experimentally quantifies the metabolic cost of transport in Mediterranean spur-thighed tortoises walking on a treadmill while also quantifying the kinematics of their movement. Results found that tortoises move more efficiently than predicted and presents the first data demonstrating a curvilinear cost of transport over their speed range. The authors conclude that tortoises have an optimum speed at which they move to minimise their metabolic cost of locomotion.
Date:
July 13, 2022
Creator:
Ewart, Heather; Tickle, Peter; Nudds, Robert; Sellers, William; Crossley, Dane A., II & Codd, Jonathan
Object Type:
Article
System:
The UNT Digital Library
Analysis of transcribed sequences from young and mature zebrafish thrombocytes
Article studying thrombocyte function and development in adult zebrafish. The authors performed single-cell RNA sequencing of the young and mature zebrafish thrombocytes and compared the two datasets for young and mature thrombocyte transcripts.
Date:
September 19, 2021
Creator:
Fallatah, Weam; De, Ronika; Burks, David J.; Azad, Rajeev K. & Jagadeeswaran, Pudur
Object Type:
Article
System:
The UNT Digital Library
Retraction Note: Gold Nanoparticles‑enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells
The editors have retracted their article Gold Nanoparticles-enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells. Concerns were brought to the attention of the Editors with respect to apparent inappropriate manipulation of the data in seven of the nine panels shown in Figure 7. The Editors no longer have confidence in the data reported in this Article.
Date:
July 5, 2022
Creator:
Farooq, Muhammad U.; Novosad, Valentyn; Rozhkova, Elena A.; Wali, Hussain; Ali, Asghar; Fateh, Ahmed A. et al.
Object Type:
Article
System:
The UNT Digital Library
Overexpression of phospholipid: diacylglycerol acyltransferase in Brassica napus results in changes in lipid metabolism and oil accumulation
Article studying the regulation of lipid metabolism in oilseeds.
Date:
March 31, 2022
Creator:
Fenyk, Stepan; Woodfield, Helen K.; Romsdahl, Trevor B.; Wallington, Emma J.; Bates, Ruth E.; Fell, David A. et al.
Object Type:
Article
System:
The UNT Digital Library
Loss of Migratory Traditions Makes the Endangered Patagonian Huemul Deer a Year-Round Refugee in Its Summer Habitat
This article analyzes the historical spatiotemporal behavior of the huemul (Hippocamelus bisulcus), an endangered deer endemic to Patagonia. Losing migratory traditions is a major threat, and may explain their presently prevalent skeletal diseases, reduced longevity, and lacking recolonizations for most remaining huemul subpopulations.
Date:
May 31, 2022
Creator:
Flueck, Werner T.; Smith-Flueck, Jo Anne M.; Escobar, Miguel E.; Zuliani, Melina; Fuchs, Beat; Geist, Valerius et al.
Object Type:
Article
System:
The UNT Digital Library
Fatty acid amide hydrolase and 9-lipoxygenase modulate cotton seedling growth by ethanolamide oxylipin levels
Article asserts that polyunsaturated N-acylethanolamines (NAEs) can be hydrolyzed by fatty acid amide hydrolase (FAAH) or oxidized by lipoxygenase (LOX). Altogether, the authors conclude that the growth of cotton seedlings involves fine-tuning of 9-NAE-HOD levels via FAAH-mediated hydrolysis and LOX-mediated production, expanding the mechanistic understanding of plant growth modulation by NAE oxylipins to a perennial crop species.
Date:
December 6, 2022
Creator:
Gaguancela-Arias, Omar; Aziz, Mina & Chapman, Kent Dean
Object Type:
Article
System:
The UNT Digital Library