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Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data
Article describes how taxonomic profiling of ancient metagenomic samples is challenging due to the accumulation of specific damage patterns on DNA over time. The authors performed a comprehensive evaluation on simulated metagenomes representing human dental calculus microbiome, with the level of DNA damage successively raised to mimic modern to ancient metagenomes.
Date:
October 2, 2023
Creator:
Pusadkar, Vaidehi & Azad, Rajeev K.
System:
The UNT Digital Library
Time-resolved systems analysis of the induction of high photosynthetic capacity in Arabidopsis during acclimation to high light
Article describes how induction of high photosynthetic capacity is a key acclimation response to high light for many herbaceous dicot plants. Here, a systems biology approach was utilized to characterize the induction of high photosynthetic capacity in strongly and weakly acclimating Arabidopsis thaliana accessions.
Date:
October 17, 2023
Creator:
Baker, Christopher R.; Cocuron, Jean-Christophe; Alonso, Ana Paula & Niyogi, Krishna K.
System:
The UNT Digital Library