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Evaluation of pathways to the C-glycosyl isoflavone puerarin in roots of kudzu (Pueraria montana lobata) (open access)

Evaluation of pathways to the C-glycosyl isoflavone puerarin in roots of kudzu (Pueraria montana lobata)

Article describes how kudzu produces both O- and C-glycosylated isoflavones, with puerarin (C-glucosyl daidzein) as an important bioactive compound. The authors go on to explain how expression of recombinant UGTs in Escherichia coli and candidate C-glycosyltransferases in Medicago truncatula were used to explore substrate specificities, and gene silencing of UGT and key isoflavone biosynthetic genes in kudzu hairy roots employed to test hypotheses concerning the substrate(s) for C-glycosylation.
Date: September 2, 2022
Creator: Adolfo, Laci M.; Burks, David J.; Rao, Xiaolan; Alvarez-Hernandez, Anislay & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
The Subantarctic Rayadito (Aphrastura subantarctica), a new bird species on the southernmost islands of the Americas (open access)

The Subantarctic Rayadito (Aphrastura subantarctica), a new bird species on the southernmost islands of the Americas

Article describes a new taxon of terrestrial bird of the genus Aphrastura (rayaditos) inhabiting the Diego Ramírez Archipelago, the southernmost point of the American continent. The authors state that the discovery of this endemic passerine highlights the need to monitor and conserve this still-pristine archipelago devoid of exotic species, which is now protected by the recently created Diego Ramírez Islands-Drake Passage Marine Park.
Date: August 26, 2022
Creator: Rozzi, Ricardo, 1960-; Quilodrán, Claudio S.; Botero-Delgadillo, Esteban; Napolitano, Constanza; Torres-Mura, Juan C.; Barroso, Omar et al.
Object Type: Article
System: The UNT Digital Library
Environmental filtering of macroinvertebrate traits influences ecosystem functioning in a large river floodplain (open access)

Environmental filtering of macroinvertebrate traits influences ecosystem functioning in a large river floodplain

Article describes how the biodiversity–ecosystem function hypothesis postulates that higher biodiversity is correlated with faster ecosystem process rates and increased ecosystem stability in fluctuating environments. The authors examined linkages among floodplain wetland habitats, invertebrate communities and their associated traits, and ecosystem function across 60 sites within the floodplain wetlands of the lower Wolastoq, Saint John River, New Brunswick.
Date: August 20, 2022
Creator: Rideout, Natalie K.; Compson, Zacchaeus Greg; Monk, Wendy A.; Brunce, Meghann R.; Hajibabaei, Mehrdad; Porter, Teresita M. et al.
Object Type: Article
System: The UNT Digital Library
Development of advanced biocatalyst tools and resources to enable biogas-based biomanufacturing (open access)

Development of advanced biocatalyst tools and resources to enable biogas-based biomanufacturing

Data management plan for the grant, "Development of advanced biocatalyst tools and resources to enable biogas-based biomanufacturing."
Date: 2022-08-15/2025-07-31
Creator: Henard, Calvin
Object Type: Text
System: The UNT Digital Library
N-acylethanolamide metabolizing enzymes are upregulated in human neural progenitor-derived neurons exposed to sub-lethal oxidative stress (open access)

N-acylethanolamide metabolizing enzymes are upregulated in human neural progenitor-derived neurons exposed to sub-lethal oxidative stress

Article is a study determining whether ReN cells, a superior cell model system for studying neurodevelopment, differentiation, and neuroprotection, express proteins involved in canonical eCB NAE signaling and whether oxidative stress can induce their expression. This study is a first step toward determining how oxidative stress affects CB1, CB2, FAAH, NAAA, and NAPE-PLD expression and their potential defense against oxidative stress.
Date: August 8, 2022
Creator: Duncan, Scott R.; Riordan, Sean M.; Hall, Conner W.; Payne, Andrew J.; Chapman, Kent Dean & Koulen, Peter
Object Type: Article
System: The UNT Digital Library
Case report: Early-onset osteoporosis in a patient carrying a novel heterozygous variant of the WNT1 gene (open access)

Case report: Early-onset osteoporosis in a patient carrying a novel heterozygous variant of the WNT1 gene

Article presents a case study of a 35 year-old Caucasian woman who experienced multiple vertebral fractures two months after her second pregnancy. The results suggest a potential role of heterozygous WNT1 variants in the pathogenesis of early-onset osteoporosis. The authors suggest that teriparatide is one of the most appropriate available therapies for such cases.
Date: August 8, 2022
Creator: Campopiano, Maria Cristina; Fogli, Antonella; Michelucci, Angela; Mazoni, Laura; Longo, Antonella; Borsari, Simona et al.
Object Type: Article
System: The UNT Digital Library
The Cluster Transfer Function of AtNEET Supports the Ferredoxin–Thioredoxin Network of Plant Cells (open access)

The Cluster Transfer Function of AtNEET Supports the Ferredoxin–Thioredoxin Network of Plant Cells

This article develops an inducible expression system to study AtNEET function in mature plants using a time-course proteomics approach. The authors report that the suppression of AtNEET cluster transfer function results in drastic changes in the expression of different members of the ferredoxin (Fd), Fd-thioredoxin (TRX) reductase (FTR), and TRX network of Arabidopsis, as well as in cytosolic cluster assembly proteins.
Date: August 6, 2022
Creator: Zandalinas, Sara I.; Song, Luhua; Nechushtai, Rachel; Mendoza-Cózatl, David & Mittler, Ron
Object Type: Article
System: The UNT Digital Library
Encroachment order and spatial patterns of broad-leaf tree species in the naturalization of a Cunninghamia lanceolata plantation (open access)

Encroachment order and spatial patterns of broad-leaf tree species in the naturalization of a Cunninghamia lanceolata plantation

Authors of the article state that the aim of this study was to understand the encroachment order, spatial patterns, interspecific associations, and species diversity of a Cunninghamia lanceolata plantation and to provide context for how to improve the spatial structure of C. lanceolata plantations. Their results show that the encroachment of broad-leaf trees into the C. lanceolata plantation followed a clear successional sequence of tree community assembly: intolerant tree species encroachment first, such as Alniphyllum fortunei and Liquidambar formosana, encroached; neutral tree species then encroachment, such as Daphniphyllum oldhamii and Schima superba, and shade-tolerant tree species encroachment last, such as Castanopsis eyrei and Castanopsis tibetana.
Date: August 3, 2022
Creator: Zeng, Xiaoxia; Chen, Lin; Compson, Zacchaeus Greg; Li, Jiejun; Peng, Qiaohua; Gong, Chao et al.
Object Type: Article
System: The UNT Digital Library
Finding new friends and revisiting old ones – how plant lipid droplets connect with other subcellular structures (open access)

Finding new friends and revisiting old ones – how plant lipid droplets connect with other subcellular structures

Article talks about how the number of described contact sites between different subcellular compartments and structures in eukaryotic cells has increased dramatically in recent years, which has substantially reinforced the well-known premise that these kinds of connections are essential for overall cellular organization. The authors discuss contact sites involving plant lipid droplets (LDs), including LD-endoplasmic reticulum (ER) connections that mediate the biogenesis of new LDs at the ER, LD-peroxisome connections.
Date: July 18, 2022
Creator: Scholz, Patricia; Chapman, Kent Dean; Mullen, Robert T. & Ischebeck, Till
Object Type: Article
System: The UNT Digital Library
Effective Mechanisms for Improving Seed Oil Production in Pennycress (Thlaspi arvense L.) Highlighted by Integration of Comparative Metabolomics and Transcriptomics (open access)

Effective Mechanisms for Improving Seed Oil Production in Pennycress (Thlaspi arvense L.) Highlighted by Integration of Comparative Metabolomics and Transcriptomics

Article presents comparative biomass, metabolomic, and transcriptomic analyses between a high oil accession (HO) and low oil accession (LO) of pennycress to assess potential factors required to optimize oil content.
Date: July 14, 2022
Creator: Johnston, Christopher; García Navarrete, Tatiana; Ortiz, Emmanuel; Romsdahl, Trevor B.; Guzha, Athanas; Chapman, Kent Dean et al.
Object Type: Article
System: The UNT Digital Library
Mediterranean Spur-Thighed Tortoises (Testudo graeca) Have Optimal Speeds at Which They Can Minimise the Metabolic Cost of Transport, on a Treadmill (open access)

Mediterranean Spur-Thighed Tortoises (Testudo graeca) Have Optimal Speeds at Which They Can Minimise the Metabolic Cost of Transport, on a Treadmill

Article experimentally quantifies the metabolic cost of transport in Mediterranean spur-thighed tortoises walking on a treadmill while also quantifying the kinematics of their movement. Results found that tortoises move more efficiently than predicted and presents the first data demonstrating a curvilinear cost of transport over their speed range. The authors conclude that tortoises have an optimum speed at which they move to minimise their metabolic cost of locomotion.
Date: July 13, 2022
Creator: Ewart, Heather; Tickle, Peter; Nudds, Robert; Sellers, William; Crossley, Dane A., II & Codd, Jonathan
Object Type: Article
System: The UNT Digital Library
GEOS Visualization And Lagrangian dynamics Immersive eXtended Reality Tool (VALIXR) for Scientific Discovery (open access)

GEOS Visualization And Lagrangian dynamics Immersive eXtended Reality Tool (VALIXR) for Scientific Discovery

Data management plan for the grant, "GEOS Visualization And Lagrangian dynamics Immersive eXtended Reality Tool (VALIXR) for Scientific Discovery."
Date: 2022-07-12/2024-07-11
Creator: West, Ruth
Object Type: Text
System: The UNT Digital Library
Comparing Methods of Defining Priority Areas for Greater Sage-Grouse (open access)

Comparing Methods of Defining Priority Areas for Greater Sage-Grouse

Article comparing priority areas for wildlife species using different methods and data types. The authors used resource selection function (RSF) models to predict high priority areas and compared this to priority areas developed using two alternative methods: (1) modified conservation buffer, and (2) utilization distribution (UD) models.
Date: July 7, 2022
Creator: Parsons, Lindsey; Jenks, Jonathan; Runia, Travis & Gregory, Andrew
Object Type: Article
System: The UNT Digital Library
Retraction Note: Gold Nanoparticles‑enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells (open access)

Retraction Note: Gold Nanoparticles‑enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells

The editors have retracted their article Gold Nanoparticles-enabled Efficient Dual Delivery of Anticancer Therapeutics to HeLa cells. Concerns were brought to the attention of the Editors with respect to apparent inappropriate manipulation of the data in seven of the nine panels shown in Figure 7. The Editors no longer have confidence in the data reported in this Article.
Date: July 5, 2022
Creator: Farooq, Muhammad U.; Novosad, Valentyn; Rozhkova, Elena A.; Wali, Hussain; Ali, Asghar; Fateh, Ahmed A. et al.
Object Type: Article
System: The UNT Digital Library
Sustaining Human Nutrition in an Increasingly Urban World (open access)

Sustaining Human Nutrition in an Increasingly Urban World

This article proposes an urban nutrition (UN) extension to the previously published urban ecological economic system. The proposed extension can be used by decision makers worldwide to evaluate how landscape configurations and agricultural production systems affect the nutritional needs of the local population while fostering sustainable practices.
Date: June 22, 2022
Creator: Torres, Angélica Valencia; Tiwari, Chetan & Atkinson, Samuel F.
Object Type: Article
System: The UNT Digital Library
Lipidomic Analysis of Arabidopsis T-DNA Insertion Lines Leads to Identification and Characterization of C-Terminal Alterations in FATTY ACID DESATURASE 6 (open access)

Lipidomic Analysis of Arabidopsis T-DNA Insertion Lines Leads to Identification and Characterization of C-Terminal Alterations in FATTY ACID DESATURASE 6

Article states that mass-spectrometry-based screening of lipid extracts of wounded and unwounded leaves from a collection of 364 Arabidopsis thaliana T-DNA insertion lines produced lipid profiles that were scored on the number and significance of their differences from the leaf lipid profiles of wild-type plants. The analysis identified Salk_109175C, which displayed alterations in leaf chloroplast glycerolipid composition, including a decreased ratio between two monogalactosyldiacylglycerol (MGDG) molecular species, MGDG(18:3/16:3) and MGDG(18:3/18:3).
Date: June 21, 2022
Creator: Lusk, Hannah J.; Neumann, Nicholas; Colter, Madeline; Roth, Mary R.; Tamura, Pamela; Yao, Libin et al.
Object Type: Article
System: The UNT Digital Library
A role for ascorbate conjugates of (+)-catechin in proanthocyanidin polymerization (open access)

A role for ascorbate conjugates of (+)-catechin in proanthocyanidin polymerization

Article describes how both biochemically and genetically, that ascorbate (AsA) is an alternative “starter unit” to flavan-3-ol monomers for leucocyanidin-derived (+)-catechin subunit extension in the Arabidopsis thaliana anthocyanidin synthase (ans) mutant. The authors' findings advance the knowledge of (+)-catechin-type PA extension and indicate that PA oligomerization does not necessarily proceed by sequential addition of a single extension unit. AsA-[C]n defines a new type of PA intermediate which we term “sub-PAs”.
Date: June 14, 2022
Creator: Yu, Keji; Dixon, R. A. & Duan, Changquing
Object Type: Article
System: The UNT Digital Library
Transcriptome of Endophyte-Positive and Endophyte-Free Tall Fescue Under Field Stresses (open access)

Transcriptome of Endophyte-Positive and Endophyte-Free Tall Fescue Under Field Stresses

This article is a study that represents the first transcriptome analysis of E+ and E− Texoma tall fescue under freezing and chilling temperatures in the natural field environment.
Date: June 14, 2022
Creator: Islam, Shofiqul; Krom, Nick; Kwon, Taegun; Li, Guifen & Saha, Malay
Object Type: Article
System: The UNT Digital Library
CancerNet: a unified deep learning network for pan‑cancer diagnostics (open access)

CancerNet: a unified deep learning network for pan‑cancer diagnostics

Article states that despite remarkable advances in cancer research, cancer remains one of the leading causes of death worldwide. The author's proposed framework for cancer diagnostics detects cancers and their tissues of origin using a unified model of cancers encompassing 33 cancers represented in The Cancer Genome Atlas. Their model exploits the learned features of different cancers reflected in the respective dysregulated epigenomes, holding a great promise in early cancer detection.
Date: June 13, 2022
Creator: Gore, Steven & Azad, Rajeev K.
Object Type: Article
System: The UNT Digital Library
The flexibility of proanthocyanidin biosynthesis in plants (open access)

The flexibility of proanthocyanidin biosynthesis in plants

Article presents research that explores proanthocyanidin (PA) biosynthesis routes in plants. The data suggests that different species have evolved different routes for PA biosynthesis.
Date: June 13, 2022
Creator: Lu, Nan; Jun, Ji Hyung; Liu, Chenggang & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Proteomic and metabolic disturbances in lignin-modified Brachypodium distachyon (open access)

Proteomic and metabolic disturbances in lignin-modified Brachypodium distachyon

This article investigates global metabolic responses to lignin pathway perturbations in the model grass Brachypodium distachyon using a systems biology approach.
Date: June 7, 2022
Creator: Barros, Jaime; Shrestha, Him K.; Serrani-Yarce, Juan C.; Engle, Nancy L.; Abraham, Paul E.; Tschaplinski, Timothy J. et al.
Object Type: Article
System: The UNT Digital Library
Loss of Migratory Traditions Makes the Endangered Patagonian Huemul Deer a Year-Round Refugee in Its Summer Habitat (open access)

Loss of Migratory Traditions Makes the Endangered Patagonian Huemul Deer a Year-Round Refugee in Its Summer Habitat

This article analyzes the historical spatiotemporal behavior of the huemul (Hippocamelus bisulcus), an endangered deer endemic to Patagonia. Losing migratory traditions is a major threat, and may explain their presently prevalent skeletal diseases, reduced longevity, and lacking recolonizations for most remaining huemul subpopulations.
Date: May 31, 2022
Creator: Flueck, Werner T.; Smith-Flueck, Jo Anne M.; Escobar, Miguel E.; Zuliani, Melina; Fuchs, Beat; Geist, Valerius et al.
Object Type: Article
System: The UNT Digital Library
Physiological Regulation of Growth, Hematology and Blood Gases in Chicken Embryos in Response to Low and High Incubation Humidity (open access)

Physiological Regulation of Growth, Hematology and Blood Gases in Chicken Embryos in Response to Low and High Incubation Humidity

Article examining effects of Low relative humidity (25–35%), and High relative humidity (85–93%) on hatchability, embryonic growth, hematology and blood gases and pH in chicken embryos.
Date: May 24, 2022
Creator: Branum, Sylvia R.; Tazawa, Hiroshi & Burggren, Warren W.
Object Type: Article
System: The UNT Digital Library
Thermal Stress Has Minimal Effects on Bacterial Communities of Thermotolerant Symbiodinium Cultures (open access)

Thermal Stress Has Minimal Effects on Bacterial Communities of Thermotolerant Symbiodinium Cultures

Article comparing the microbial communities of three isolates from different species of the genus Symbiodinium (formerly known as Symbiodinium clade A) with different ecophysiology, levels of interaction with the animal host, and thermal adaptations. Results suggest that bacteria associated or co-cultured with thermotolerant Symbiodinium might play an important role in thermotolerance.
Date: May 19, 2022
Creator: Díaz-Almeyda, Erika M.; Ryba, Tyrone; Ohdera, Aki H.; Shafer, Natali; Link, Caroline; Prado-Zapata, Marcela et al.
Object Type: Article
System: The UNT Digital Library