The protein conformational basis of isoflavone biosynthesis (open access)

The protein conformational basis of isoflavone biosynthesis

Authors of the article assert that isoflavonoids play important roles in plant defense and also exhibit a range of mammalian health-promoting activities. They emphasize that understanding the structural basis of isoflavone biosynthesis will facilitate the engineering of new bioactive isoflavonoids.
Date: November 15, 2022
Creator: Wang, Xiaoqiang; Pan, Haiyun; Sagurthi, Someswar; Paris, Vincent; Zhuo, Chunliu & Dixon, R. A.
Object Type: Article
System: The UNT Digital Library
Quantum algorithm for electronic band structures with local tight-binding orbitals (open access)

Quantum algorithm for electronic band structures with local tight-binding orbitals

Article says that while the main thrust of quantum computing research in materials science is to accurately measure the classically intractable electron correlation effects due to Coulomb repulsion, designing optimal quantum algorithms for simpler problems with well-understood solutions is a useful tactic to advance our quantum “toolbox”. In this paper, the authors adopt a direct space approach, using a novel hybrid first/second-quantized qubit mapping which allows us to construct a single Hamiltonian, and a single cost-function, suitable for solving the entire electronic band structure.
Date: June 14, 2022
Creator: Sherbert, Kyle; Jayaraj, Anooja & Buongiorno Nardelli, Marco
Object Type: Article
System: The UNT Digital Library
Transgenic manipulation of triacylglycerol biosynthetic enzymes in B. napus alters lipid-associated gene expression and lipid metabolism (open access)

Transgenic manipulation of triacylglycerol biosynthetic enzymes in B. napus alters lipid-associated gene expression and lipid metabolism

Article asserts that oilseed rape (Brassica napus) is an important crop that is cultivated for the oil (mainly triacylglycerol; TAG) it produces in its seeds. The author's results show that up-regulation of these key enzymes differentially affects lipid composition and distribution as well as lipid-associated gene expression, providing important information which could be used to improve crop properties by metabolic engineering.
Date: March 1, 2022
Creator: Liao, Pan; Lechon, Tamara; Romsdahl, Trevor; Woodfield, Helen K.; Fenyk, Stepan; Fawcett, Tony et al.
Object Type: Article
System: The UNT Digital Library
Tuning excited state electronic structure and charge transport in covalent organic frameworks for enhanced photocatalytic performance (open access)

Tuning excited state electronic structure and charge transport in covalent organic frameworks for enhanced photocatalytic performance

Article describes how covalent organic frameworks (COFs) represent an emerging class of organic photocatalysts. The authors use reticular chemistry to construct a family of isoreticular crystalline hydrazide-based COF photocatalysts, with the optoelectronic properties and local pore characteristics of the COFs modulated using different linkers.
Date: February 27, 2023
Creator: Chen, Zhongshan; Wang, Jingyi; Hao, Mengjie; Xie, Yinghui; Liu, Xiaolu; Waterhouse, Geoffrey I. N. et al.
Object Type: Article
System: The UNT Digital Library
Spatially confined protein assembly in hierarchical mesoporous metal-organic framework (open access)

Spatially confined protein assembly in hierarchical mesoporous metal-organic framework

Article discusses how the immobilization of biomolecules into porous materials could lead to significantly enhanced performance in terms of stability towards harsh reaction conditions and easier separation for their reuse. To gain insights into the spatial arrangement of biomolecules within the nanopores, the authors used in situ small-angle neutron scattering (SANS) to probe deuterated green fluorescent protein (d-GFP) entrapped in a mesoporous MOF.
Date: February 21, 2023
Creator: Wang, Xiaoliang; He, Lilin; Sumner, Jacob; Qian, Shuo; Zhang, Qiu; O'Neill, Hugh et al.
Object Type: Article
System: The UNT Digital Library
Subcellular localization of fungal specialized metabolites (open access)

Subcellular localization of fungal specialized metabolites

Article discusses how fungal specialized metabolites play an important role in the environment and have impacted human health and survival significantly. This review illustrates the biosynthesis of specialized metabolites where the localization of all, or some, of the biosynthetic enzymes have been determined and describes the methods used to identify the sub-cellular localization.
Date: May 25, 2022
Creator: Skellam, Elizabeth
Object Type: Article
System: The UNT Digital Library
A gene based combination test using GWAS summary data (open access)

A gene based combination test using GWAS summary data

Article describes how gene-based association tests provide a useful alternative and complement to the usual single marker association tests, especially in genome-wide association studies (GWAS). The authors propose a test named OWC based on summary statistics from GWAS data.
Date: January 3, 2023
Creator: Zhang, Jianjun; Liang, Xiaoyu; Gonzales, Samantha; Liu, Jianguo; Gao, Xiaoyi Raymond & Wang, Xuexia
Object Type: Article
System: The UNT Digital Library
Prebiotic/probiotic supplementation resulted in reduced visceral fat and mRNA expression associated with adipose tissue inflammation, systemic inflammation, and chronic disease risk (open access)

Prebiotic/probiotic supplementation resulted in reduced visceral fat and mRNA expression associated with adipose tissue inflammation, systemic inflammation, and chronic disease risk

Article describes how prebiotic/probiotic supplementation represents a viable option for addressing elevated systemic inflammation and chronic disease risk in overweight individuals. The key findings support that 90-day prebiotic/probiotic supplementation may be associated with reduced adipose tissue inflammation, reduced systemic inflammation, and reduced chronic disease risk.
Date: November 28, 2022
Creator: McFarlin, Brian K.; Tanner, Elizabeth A.; Hill, David W. & Vingren, Jakob L.
Object Type: Article
System: The UNT Digital Library
Using solar radiation data in soil moisture diagnostic equation for estimating root-zone soil moisture (open access)

Using solar radiation data in soil moisture diagnostic equation for estimating root-zone soil moisture

Article describes how the soil moisture daily diagnostic equation (SMDE) evaluates the relationship between the loss function coefficient and the summation of the weighted average of precipitation. The study has confirmed that using actual solar radiation data in the soil moisture daily diagnostic equation can improve its accuracy.
Date: December 12, 2022
Creator: Omotere, Olumide; Pan, Feifei & Wang, Lei
Object Type: Article
System: The UNT Digital Library
Urban Feature Extraction within a Complex Urban Area with an Improved 3D-CNN Using Airborne Hyperspectral Data (open access)

Urban Feature Extraction within a Complex Urban Area with an Improved 3D-CNN Using Airborne Hyperspectral Data

Article describes how airborne hyperspectral data has high spectral-spatial information, but mining and using this information effectively is still a great challenge. Therefore, a 3D-1D-CNN model was proposed for feature extraction in complex urban with hyperspectral images affected by cloud shadows.
Date: February 10, 2023
Creator: Ma, Xiaotong; Man, Qixia; Yang, Xinming; Dong, Pinliang; Yang, Zelong; Wu, Jingru et al.
Object Type: Article
System: The UNT Digital Library
Metabolic reprogramming underlies cavefish muscular endurance despite loss of muscle mass and contractility (open access)

Metabolic reprogramming underlies cavefish muscular endurance despite loss of muscle mass and contractility

Article discusses the Mexican cavefish Astyanax mexicanus, has lost moderate-to-vigorous activity following cave colonization, reaching basal swim speeds ~3.7-fold slower than their river-dwelling counterpart. Collectively, the authors reveal broad skeletal muscle changes following cave colonization, displaying an adaptive skeletal muscle phenotype reminiscent to mammalian disuse and high-fat models while simultaneously maintaining a unique capacity for sustained muscle contraction via enhanced glycogen metabolism.
Date: January 24, 2023
Creator: Olsen, Luke; Levy, Michaella; Medley, J. Kyle; Hassan, Huzaifa; Miller, Brandon; Alexander, Richard et al.
Object Type: Article
System: The UNT Digital Library
Automated Approach to In Vitro Image-Guided Photothermal Therapy with Top-Down and Bottom-Up-Synthesized Graphene Quantum Dots (open access)

Automated Approach to In Vitro Image-Guided Photothermal Therapy with Top-Down and Bottom-Up-Synthesized Graphene Quantum Dots

Article discusses how, based on recent studies, graphene quantum dots (GQDs) are expected to possess advantageous photothermal properties and facilitate fluorescence image-tracking in the visible and near-infrared (NIR), while surpassing other graphene-based materials in their biocompatibility. The combination of the photothermal and imaging modalities tested in vitro makes the GQDs developed in this work prospective agents for cancer theragnostics.
Date: February 22, 2023
Creator: Lee, Bong; Stokes, Gretel A.; Valimukhametova, Alina; Nguyen, Steven; Gonzalez-Rodriguez, Roberto; Bhaloo, Adam et al.
Object Type: Article
System: The UNT Digital Library
Lignocellulosic-Based Activated Carbon-Loaded Silver Nanoparticles and Chitosan for Efficient Removal of Cadmium and Optimization Using Response Surface Methodology (open access)

Lignocellulosic-Based Activated Carbon-Loaded Silver Nanoparticles and Chitosan for Efficient Removal of Cadmium and Optimization Using Response Surface Methodology

Article expresses how the cadmium-contaminated water body is a worldwide concern for the environment and toxic to human beings and the removal of cadmium ions from drinking and groundwater sustainably and cost-effectively is important. The results showed that synthesized CS-KAC-Ag was a biocompatible and versatile porous filtering material for the decontamination of different toxic metal ions.
Date: December 13, 2022
Creator: Mandal, Sujata; Marpu, Sreekar; Omary, Mohammad A.; Dinulescu, Catalin C.; Prybutok, Victor R. & Shi, Sheldon
Object Type: Article
System: The UNT Digital Library
Fatty acid amide hydrolase and 9-lipoxygenase  modulate cotton seedling growth by ethanolamide  oxylipin levels (open access)

Fatty acid amide hydrolase and 9-lipoxygenase modulate cotton seedling growth by ethanolamide oxylipin levels

Article asserts that polyunsaturated N-acylethanolamines (NAEs) can be hydrolyzed by fatty acid amide hydrolase (FAAH) or oxidized by lipoxygenase (LOX). Altogether, the authors conclude that the growth of cotton seedlings involves fine-tuning of 9-NAE-HOD levels via FAAH-mediated hydrolysis and LOX-mediated production, expanding the mechanistic understanding of plant growth modulation by NAE oxylipins to a perennial crop species.
Date: December 6, 2022
Creator: Gaguancela-Arias, Omar; Aziz, Mina & Chapman, Kent Dean
Object Type: Article
System: The UNT Digital Library
Modulating Uranium Extraction Performance of Multivariate Covalent Organic Frameworks through Donor–Acceptor Linkers and Amidoxime Nanotraps (open access)

Modulating Uranium Extraction Performance of Multivariate Covalent Organic Frameworks through Donor–Acceptor Linkers and Amidoxime Nanotraps

Article presents a COF (covalent organic framework)-based adsorption-photocatalysis strategy for selective removal of uranyl from seawater in the absence of sacrificial reagents. This work shows that multivariate COF adsorption-photocatalysts can be rationally engineered to work efficiently and stably without sacrificial electron donors, thus opening the pathway for the economic and efficient extraction of uranium from the earth’s oceans.
Date: January 4, 2023
Creator: Hao, Mengjie; Xie, Yinghui; Liu, Xiaolu; Chen, Zhongshan; Yang, Hui; Waterhouse, Geoffrey I. N. et al.
Object Type: Article
System: The UNT Digital Library
Dementia and COVID-19 among Older African American Adults: A Scoping Review of Healthcare Access and Resources (open access)

Dementia and COVID-19 among Older African American Adults: A Scoping Review of Healthcare Access and Resources

Article discusses how African American/Black communities comprise 12.2% of the U.S. population, with a COVID-19 infection rate of more than 18% and marginal access to healthcare services. This scoping review synthesizes the emerging evidence on healthcare accessibility among older African American adult communities with dementia and COVID-19, as well as the resource requirements for this population during the pandemic.
Date: February 16, 2023
Creator: Udoh, Idorenyin Imoh; Mpofu, Elias & Prybutok, Gayle
Object Type: Article
System: The UNT Digital Library
Mapping Health Fragility and Vulnerability in Air Pollution–Monitoring Networks in Dallas–Fort Worth (open access)

Mapping Health Fragility and Vulnerability in Air Pollution–Monitoring Networks in Dallas–Fort Worth

Article describes how environmental air pollution remains a major contributor to negative health outcomes and mortality, but the relationship between socially vulnerable populations and air pollution is not well understood. This paper seeks to understand how air pollution monitor placement strategies and policy may neglect social vulnerabilities and therefore potentially underestimate exposure burdens in vulnerable populations.
Date: January 18, 2023
Creator: Northeim, Kari & Oppong, Joseph R.
Object Type: Article
System: The UNT Digital Library
Genetic Differentiation of the South Florida Red-Shouldered Hawk (Buteo lineatus extimus) from the Nominate Subspecies (Buteo lineatus lineatus) (open access)

Genetic Differentiation of the South Florida Red-Shouldered Hawk (Buteo lineatus extimus) from the Nominate Subspecies (Buteo lineatus lineatus)

Article discusses how the south Florida subspecies of the Red-shouldered Hawk (Buteo lineatus extimus) is distinctly paler and smaller than other subspecies, reproduces at a lower rate, and can occupy very different habitats such as open marshes and grasslands with only scattered trees. The authors evaluated population differentiation between the south Florida population of Red-shouldered Hawks and two populations of eastern Red-shouldered Hawks (B. l. lineatus) in suburban (Cincinnati) and rural (Hocking Hills) environments in southern Ohio.
Date: March 1, 2023
Creator: Dykstra, Madeline A.; Marain, Donna M.; Wrona, Anna M.; Dysktra, Cheryl R.; Farrington, Heather L.; Johnson, Jeff A. et al.
Object Type: Article
System: The UNT Digital Library
Progress in understanding and improving oil content and quality in seeds (open access)

Progress in understanding and improving oil content and quality in seeds

Article asserts that the world’s population is projected to increase by two billion by 2050, resulting in food and energy insecurity. This review provides a summary of the current knowledge of oil metabolism and discusses how photochemical activity and unconventional pathways can contribute to high carbon conversion efficiency in seeds.
Date: January 26, 2023
Creator: Sagun, Julius Ver; Yadav, Umesh P. & Alonso, Ana Paula
Object Type: Article
System: The UNT Digital Library
A metabolomic platform to identify and quantify polyphenols in coffee and related species using liquid chromatography mass spectrometry (open access)

A metabolomic platform to identify and quantify polyphenols in coffee and related species using liquid chromatography mass spectrometry

Article describes how products of plant secondary metabolism, such as phenolic compounds, flavonoids, alkaloids, and hormones, play an important role in plant growth, development, stress resistance. The authors state that the overall goal of this study was to develop a high-throughput workflow to identify and quantify plant polyphenols.
Date: January 6, 2023
Creator: Castro-Moretti, Fernanda R.; Cocuron, Jean-Christophe; Castillo-Gonzalez, Humberto; Escudero-Leyva, Efrain; Chaverri, Priscila; Guerreiro-Filho, Oliveiro et al.
Object Type: Article
System: The UNT Digital Library
Scientists warning on the ecological effects of radioactive leaks on ecosystems (open access)

Scientists warning on the ecological effects of radioactive leaks on ecosystems

Article describes the devastating effects of nuclear radiation and its long-lasting consequences on Earth’s ecosystems. The authors call upon all scientists to communicate the importance of the environmental impacts of such an event to all life forms on Earth, including humankind.
Date: January 20, 2023
Creator: Bonacic, Cristián; Medellin, Rodrigo A.; Ripple, William; Sukumar, Raman; Ganswindt, Andre; Padua, Suzana M. et al.
Object Type: Article
System: The UNT Digital Library
Elucidating the role of negative parenting in the genetic v. environmental influences on adult psychopathic traits (open access)

Elucidating the role of negative parenting in the genetic v. environmental influences on adult psychopathic traits

Article states that though adult psychopathic traits emerge from both genetic and environmental risk, no studies have examined etiologic associations between adult psychopathic traits and experiences of parenting in childhood, or the extent to which parenting practices may impact the heritability of adult psychopathic traits using a genetically-informed design. Utilizing a genetically-informed design, the authors found that both genetic and non-shared environmental factors contribute to the emergence of psychopathic traits.
Date: August 12, 2021
Creator: Dotterer, Hailey L.; Vazquez, Alexandra Y.; Hyde, Luke W.; Neumann, Craig S.; Santtila, Pekka; Pezzoli, Patrizia et al.
Object Type: Article
System: The UNT Digital Library
Post-imprinting modification: electrochemical and scanning electrochemical microscopy studies of a semi-covalently surface imprinted polymer (open access)

Post-imprinting modification: electrochemical and scanning electrochemical microscopy studies of a semi-covalently surface imprinted polymer

Authors of the article describe a post-imprinting modification of the imprinted molecular cavities for electrochemical sensing of a target protein. These mesoporous cavities were modified with a ferrocene ‘electrochemical’ tracer for electrochemical transduction of the target protein recognition.
Date: January 25, 2023
Creator: Kalecki, Jakub; Cieplak, Maciej; Iskierko, Z.; Piechowska, Joanna; Nogala, Wojciech; D'Souza, Francis et al.
Object Type: Article
System: The UNT Digital Library
An investigation of steric influence on the reactivity of FeV(O)(OH) tautomers in stereospecific C–H hydroxylation (open access)

An investigation of steric influence on the reactivity of FeV(O)(OH) tautomers in stereospecific C–H hydroxylation

Article describes how two new tetradentate N4 ligands (LN4), LN4 = Me2,Me2PyzTACN (1-(2-(3,5-dimethyl-1H-pyrazol-1-yl)ethyl)-4,7-dimethyl-1,4,7-triazacyclononane) and Me2,MeImTACN (1-((1-methyl-1H-imidazol-1-yl)methyl)-4,7-dimethyl-1,4,7-triazacyclononane) have been synthesized and their corresponding Fe(II) complexes [FeII(Me2,Me2PyzTACN)(CF3SO3)2], 1Pz, and [FeII(Me2,MeImTACN)(CF3SO3)2], 1Im, have been prepared and characterized. Based on these labelling studies, the steric influence exerted by each of the ligands towards the relative reactivity of the oxo ligands of the corresponding pair of Fe(V)(O)(OH) tautomers can be derived.
Date: January 5, 2023
Creator: Mitra, Mainak; Brinkmeier, Alexander; Li, Yong; Borrell, Margarida; Call, Arnau; Fillol, Julio Lloret et al.
Object Type: Article
System: The UNT Digital Library