Replicate DNA metabarcoding can discriminate seasonal and spatial abundance shifts in river macroinvertebrate assemblages (open access)

Replicate DNA metabarcoding can discriminate seasonal and spatial abundance shifts in river macroinvertebrate assemblages

Article asserts that the delivery of consistent and accurate fine-resolution data on biodiversity using metabarcoding promises to improve environmental assessment and research. The authors propose a novel hierarchical approach to recovering abundance information from metabarcoding, and demonstrate this technique using benthic macroinvertebrates.
Date: March 31, 2023
Creator: Bush, A.; Compson, Z.; Rideout, N. K.; Levenstein, B.; Kattilakoski, M.; Hajibabaei, M. et al.
System: The UNT Digital Library
Seeing plants as never before (open access)

Seeing plants as never before

Authors of the article assert that imaging has long supported our ability to understand the inner life of plants, their development, and response to a dynamic environment. The purpose of this review was to provide the scientific community with an overview of current imaging methods, which rely variously on either nuclear magnetic resonance (NMR), mass spectrometry (MS) or infrared (IR) spectroscopy, and to present some examples of their application in order to illustrate their utility.
Date: March 9, 2023
Creator: Borisjuk, Ljudmilla; Horn, Patrick J.; Chapman, Kent Dean; Jakob, Peter M.; Gündel, Andre & Rolletschek, Hardy
System: The UNT Digital Library
X-Ray Unveiling Events in a z ≈ 1.6 Active Galactic Nucleus in the 7 Ms Chandra Deep Field-South (open access)

X-Ray Unveiling Events in a z ≈ 1.6 Active Galactic Nucleus in the 7 Ms Chandra Deep Field-South

Authors of the article explain that they investigated the extreme X-ray variability of a z = 1.608 active galactic nucleus in the 7 Ms Chandra Deep Field-South (XID 403), which showed two significant X-ray brightening events.
Date: May 18, 2023
Creator: Yu, Li-Ming; Luo, Bin; Brandt, William Nielsen; Bauer, Franz E.; De Cicco, D.; Fabian, Andrew C. et al.
System: The UNT Digital Library
Gemini Near Infrared Spectrograph–Distant Quasar Survey: Augmented Spectroscopic Catalog and a Prescription for Correcting UV-based Quasar Redshifts (open access)

Gemini Near Infrared Spectrograph–Distant Quasar Survey: Augmented Spectroscopic Catalog and a Prescription for Correcting UV-based Quasar Redshifts

Article describes how quasars at z ≳ 1 most often have redshifts measured from rest-frame ultraviolet emission lines. One of the most common such lines, C ivλ1549, shows blueshifts up to ≈5000 km s−1 and in rare cases even higher. The authors present spectroscopic measurements for 260 sources at 1.55 ≲ z ≲ 3.50 having −28.0 ≲ Mi ≲ − 30.0 mag from the Gemini Near Infrared Spectrograph–Distant Quasar Survey (GNIRS-DQS) catalog, augmenting the previous iteration, which contained 226 of the 260 sources whose measurements are improved upon in this work.
Date: June 13, 2023
Creator: Matthews, Brandon M.; Dix, Cooper; Shemmer, Ohad; Brotherton, Michael S.; Myers, Adam D.; Andruchow, I. et al.
System: The UNT Digital Library
Symmetry breaking charge transfer leading to charge separation in a far-red absorbing bisstyryl-BODIPY dimer (open access)

Symmetry breaking charge transfer leading to charge separation in a far-red absorbing bisstyryl-BODIPY dimer

Article describes how symmetry breaking charge transfer is one of the important photo-events occurring in photosynthetic reaction centers that is responsible for initiating electron transfer leading to a long-lived charge-separated state and has been successfully employed in light-to-electricity converting optoelectronic devices. In this study, the authors report a newly synthesized, far-red absorbing and emitting BODIPY-dimer to undergo symmetry-breaking charge transfer leading to charge-separated states of appreciable lifetimes in polar solvents.
Date: December 15, 2023
Creator: Yahagh, Aida; Kaswan, Ram R.; Kazemi, Shahrzad; Karr, Paul A. & D'Souza, Francis
System: The UNT Digital Library
Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data (open access)

Benchmarking Metagenomic Classifiers on Simulated Ancient and Modern Metagenomic Data

Article describes how taxonomic profiling of ancient metagenomic samples is challenging due to the accumulation of specific damage patterns on DNA over time. The authors performed a comprehensive evaluation on simulated metagenomes representing human dental calculus microbiome, with the level of DNA damage successively raised to mimic modern to ancient metagenomes.
Date: October 2, 2023
Creator: Pusadkar, Vaidehi & Azad, Rajeev K.
System: The UNT Digital Library
ARKENSTONE – I. A novel method for robustly capturing high specific energy outflows in cosmological simulations (open access)

ARKENSTONE – I. A novel method for robustly capturing high specific energy outflows in cosmological simulations

Article describes how ARKENSTONE is a new model for multiphase, stellar feedback-driven galactic winds designed for inclusion in coarse resolution cosmological simulations. In this first paper of a series, the authors describe the features that allow ARKENSTONE to properly treat high specific energy wind components and demonstrate them using idealized non-cosmological simulations of a galaxy with a realistic circumgalactic medium (CGM) using the AREPO code.
Date: October 17, 2023
Creator: Smith, Matthew C.; Fielding, Drummond B.; Bryan, Greg L.; Kim, Chang-Goo; Ostriker, Eve C.; Somerville, Rachel S. et al.
System: The UNT Digital Library