Bioinformatics for Diagnostics, Forensics, and Virulence Characterization and Detection (open access)

Bioinformatics for Diagnostics, Forensics, and Virulence Characterization and Detection

We summarize four of our group's high-risk/high-payoff research projects funded by the Intelligence Technology Innovation Center (ITIC) in conjunction with our DHS-funded pathogen informatics activities. These are (1) quantitative assessment of genomic sequencing needs to predict high quality DNA and protein signatures for detection, and comparison of draft versus finished sequences for diagnostic signature prediction; (2) development of forensic software to identify SNP and PCR-RFLP variations from a large number of viral pathogen sequences and optimization of the selection of markers for maximum discrimination of those sequences; (3) prediction of signatures for the detection of virulence, antibiotic resistance, and toxin genes and genetic engineering markers in bacteria; (4) bioinformatic characterization of virulence factors to rapidly screen genomic data for potential genes with similar functions and to elucidate potential health threats in novel organisms. The results of (1) are being used by policy makers to set national sequencing priorities. Analyses from (2) are being used in collaborations with the CDC to genotype and characterize many variola strains, and reports from these collaborations have been made to the President. We also determined SNPs for serotype and strain discrimination of 126 foot and mouth disease virus (FMDV) genomes. For (3), currently >1000 probes …
Date: April 5, 2005
Creator: Gardner, S & Slezak, T
Object Type: Article
System: The UNT Digital Library
Near-frictionless carbon coatings for spark-ignited direct-injected fuel systems. Final report, January 2002. (open access)

Near-frictionless carbon coatings for spark-ignited direct-injected fuel systems. Final report, January 2002.

This report describes an investigation by the Tribology Section of Argonne National Laboratory (ANL) into the use of near-frictionless carbon (NFC) coatings for spark-ignited, direct-injected (SIDI) engine fuel systems. Direct injection is being pursued in order to improve fuel efficiency and enhance control over, and flexibility of, spark-ignited engines. SIDI technology is being investigated by the Partnership for a New Generation of Vehicles (PNGV) as one route towards meeting both efficiency goals and more stringent emissions standards. Friction and wear of fuel injector and pump parts were identified as issues impeding adoption of SIDI by the OTT workshop on ''Research Needs Related to CIDI and SIDI Fuel Systems'' and the resulting report, Research Needs Related to Fuel Injection Systems in CIDI and SIDI Engines. The following conclusions were reached: (1) Argonne's NFC coatings consistently reduced friction and wear in existing and reformulated gasolines. (2) Compared to three commercial DLC coatings, NFC provided the best friction reduction and protection from wear in gasoline and alternative fuels. (3) NFC was successfully deposited on production fuel injectors. (4) Customized wear tests were performed to simulate the operating environment of fuel injectors. (5) Industry standard lubricity test results were consistent with customized wear tests …
Date: April 5, 2002
Creator: Hershberger, J.; Ozturk, O.; Ajayi, O. O.; Woodford, J. B.; Erdemir, A. & Fenske, G. R.
Object Type: Report
System: The UNT Digital Library
Laser Field Imaging Through Fourier Transform Heterodyne (open access)

Laser Field Imaging Through Fourier Transform Heterodyne

The authors present a detection process capable of directly imaging the transverse amplitude, phase, and Doppler shift of coherent electromagnetic fields. Based on coherent detection principles governing conventional heterodyned RADAR/LADAR systems, Fourier Transform Heterodyne incorporates transverse spatial encoding of the reference local oscillator for image capture. Appropriate selection of spatial encoding functions allows image retrieval by way of classic Fourier manipulations. Of practical interest: (1) imaging may be accomplished with a single element detector/sensor requiring no additional scanning or moving components, (2) as detection is governed by heterodyne principles, near quantum limited performance is achievable, (3) a wide variety of appropriate spatial encoding functions exist that may be adaptively configured in real-time for applications requiring optimal detection, and (4) the concept is general with the applicable electromagnetic spectrum encompassing the RF through optical.
Date: April 5, 1999
Creator: Cooke, Bradly J.; Laubscher, Bryan E.; Olivas, Nicholas L.; Galbraith, Amy E.; Strauss, Charlie E. & Grubler, Andrew C.
Object Type: Article
System: The UNT Digital Library
Radiochemical detector cross section sensitivity studies in the A approx. = 90 mass region (open access)

Radiochemical detector cross section sensitivity studies in the A approx. = 90 mass region

The use of radiochemical detectors in the A approx. = 90 mass region to measure 14 MeV neutron fluences is investigated from the standpoint of cross section sensitivities. Specifically, /sup 90/Zr and /sup 89/Y neutron-induced cascades leading to the production of /sup 89/Zr, /sup 88/Zr, /sup 88/Y, and /sup 87/Y are studied in a one-energy-group approximation, and the sensitivities of the measured ratios R/sub Z/ = /sup 88/Zr//sup 89/Zr and R/sub Y/ = /sup 87/Y//sup 88/Y to the input cross sections are delineated. The most sensitive cross section in each cascade is the cross section that dominates the production of the final isotope in the chain. Only one of the isomeric levels in /sup 90/Zr contributes importantly to the Zr cascade. Burnback (n,..gamma..) and burnup (n,p) reactions are also considered. The (n,..gamma..) effects are small, but (n,p) effects can be substantial due to low energy enhancements of (n,p) cross sections in the neutron-deficient isotopes.
Date: April 5, 1984
Creator: MacGregor, Malcolm H.
Object Type: Report
System: The UNT Digital Library
Annual Report 2006 for Hydrodynamics and Radiation Hydrodynamics with Astrophysical Applications (open access)

Annual Report 2006 for Hydrodynamics and Radiation Hydrodynamics with Astrophysical Applications

We report the ongoing work of our group in hydrodynamics and radiation hydrodynamics with astrophysical applications. During the period of the existing grant, we have carried out two types of experiments at the Omega laser. One set of experiments has studied radiatively collapsing shocks, obtaining data using a backlit pinhole with a 100 ps backlighter and beginning to develop the ability to look into the shock tube with optical or x-ray diagnostics. Other experiments have studied the deeply nonlinear development of the Rayleigh-Taylor (RT) instability from complex initial conditions, using dual-axis radiographic data with backlit pinholes and ungated detectors to complete the data set for a Ph.D. student. We lead a team that is developing a proposal for experiments at the National Ignition Facility and are involved in experiments at NIKE and LIL. All these experiments have applications to astrophysics, discussed in the corresponding papers. We assemble the targets for the experiments at Michigan, where we also prepare many of the simple components. We also have several projects underway in our laboratory involving our x-ray source. The above activities, in addition to a variety of data analysis and design projects, provide good experience for graduate and undergraduates students. In the …
Date: April 5, 2007
Creator: Drake, R. Paul
Object Type: Report
System: The UNT Digital Library
Statutory Interpretation: Theories, Tools, and Trends (open access)

Statutory Interpretation: Theories, Tools, and Trends

This report begins by discussing the general goals of statutory interpretation, reviewing a variety of contemporary as well as historical approaches. The report then briefly describes the two primary theories of interpretation employed today, before examining the main types of tools that courts use to determine statutory meaning. The report concludes by exploring developing issues in statutory interpretation.
Date: April 5, 2015
Creator: Brannon, Valerie C.
Object Type: Report
System: The UNT Digital Library
Texas Register, Volume 21, Number 25, Pages 2855-3088, April 5, 1996 (open access)

Texas Register, Volume 21, Number 25, Pages 2855-3088, April 5, 1996

A weekly publication, the Texas Register serves as the journal of state agency rulemaking for Texas. Information published in the Texas Register includes proposed, adopted, withdrawn and emergency rule actions, notices of state agency review of agency rules, governor's appointments, attorney general opinions, and miscellaneous documents such as requests for proposals. After adoption, these rulemaking actions are codified into the Texas Administrative Code.
Date: April 5, 1996
Creator: Texas. Secretary of State.
Object Type: Journal/Magazine/Newsletter
System: The Portal to Texas History