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This volume includes the proceedings of the 1998 DOE Records Management Conference.

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This article presents a new method to automatically detect stems in dense and homogeneous forest using single-scan terrestrial laser scanning (TLS) data.

Fall 2001: (September 29-30, 2001; Irvine, CA) This meeting focused on presentations and plans for two ad hoc projects sponsored by the committee?the burning plasma study and the partially ionized plasma proposals. Ongoing discussions with CHEDPP chair Ron Davidson were also included. Significant attention was given to FESAC and the Fusion Energy Snowmass meeting planned for Summer 2002. These discussions lead to continued development of the proposal for the burning plasma project. A science talk on plasma processing of materials from an industry perspective provided a backdrop for discussion of the partially ionized plasmas project. Spring 2002: (April 5-6, 2003; Washington, DC) This meeting included updates from the funding agencies (DOE, NSF, ONR, and NASA) and a discussion panel amongst them, a review of the burning plasma study proposal, and a discussion of the HED study?s progress. Future work items such as the plasma physics volume of the decadal physics survey and potential studies on computer modeling and simulation were also discussed. Fall 2002: (September 28-29, 2002; Irvine, CA) This meeting discussed the status of the then-recently started burning plasma study, heard the findings and recommendations of the HED study, and discussed the prospects for fusion in light of the …

Testing superconducting accelerator magnets is inherently coupled with the proper handling of quenches; i.e., protecting the magnet and characterizing the quench process. Therefore, software implementations must include elements of both data acquisition and real-time controls. The architecture of the quench management software developed at Fermilab's Magnet Test Facility is described. This system consists of quench detection, quench protection, and quench characterization components that execute concurrently in a distributed system. Collaboration between the elements of quench detection, quench characterization and current control are discussed, together with a schema of distributed saving of various quench-related data. Solutions to synchronization and reliability in such a distributed quench system are also presented.

ICOOL[1] is a Fortran77 macroparticle transport code widely used by researchers to study the front end of a neutrino factory/muon collider[2]. In part due to the desire that ICOOL be usable over multiple computer platforms and operating systems, the code uses simple text files for input/output services. This choice together with user-driven requests for greater and greater choice of lattice element type and configuration has led to ICOOL input decks becoming rather difficult to compose and modify easily. Moreover, the lack of a standard graphical post-processor has prevented many ICOOL users from extracting all but the most simple results from the output files. Here I present two attempts to improve this situation: First, a simple but quite general graphical pre-processor (NIME) written in the Tcl/TK[3] to permit users to write and maintain ASCII-formatted input files by use of simple macro definitions and expansions. Second, an interactive post-processor written in Fortran90 and NCAR graphics, which allows users to define, extract, and then examine the behavior of various particle subsets. In this paper I show some examples of use of both the pre- and post-processor for a standard ICOOL run.

This article summarizes key messages from 40 indicators in the Lancet Countdown's 2017 report.

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It is shown that Fermi-Dirac statistics is guaranteed by the Dirac current, from which spin-dependent quantum velocity fields and spin-dependent quantum trajectories can be inferred. Pauli's exclusion principle is demonstrated using the spin-dependent quantum trajectories. The Dirac current, unlike the Schroedinger current, is nonzero for stationary bound states due to the permanent magnetic moment of the electron. It is of order c{sup 0} in agreement with observation that Fermi-Dirac statistics is independent of electronic velocity. In summary the physical basis for exchange-correlation is found in Dirac's equation, although Schroedinger's equation may be used to evaluate the Dirac current in the nonrelativistic regime of electronic velocity.

Design Tools use a Web-based Java interface to guide a product designer through the design-to-analysis cycle for a specific, well-constrained design problem. When these Design Tools are mapped onto a Web-based distributed architecture for high-performance computing, the result is a family of Distributed Design Tools (DDTs). The software components that enable this mapping consist of a Task Sequencer, a generic Script Execution Service, and the storage of both data and metadata in an active, object-oriented database called the Product Database Operator (PDO). The benefits of DDTs include improved security, reliability, scalability (in both problem size and computing hardware), robustness, and reusability. In addition, access to the PDO unlocks its wide range of services for distributed components, such as lookup and launch capability, persistent shared memory for communication between cooperating services, state management, event notification, and archival of design-to-analysis session data.

The ADIC Application Server brings the accuracy and efficiency of automatic differentiation to the World Wide Web. Users of the ADIC Application Server can upload source code written in ANSI-C, manage remote files, differentiate selected functions, and download code augmented with derivative computations. Using a simple driver and linking to the appropriate libraries, the user can compile and run the differentiated code locally. We discuss the unique requirements for an automatic differentiation application server and describe the implementation of the ADIC Application Server.

Using a hydrodynamic model, we predict the transverse momentum dependence of the spectra and the elliptic flow for different hadrons in Au+Au collisions at sqrt(s)=130 AGeV. The dependence of the differential and p{_}t-integrated elliptic flow on the hadron mass, equation of state and freeze-out temperature is studied both numerically and analytically.

The National Ignition Facility (NIF) requires diagnostics to analyze high-energy density physics experiments. A VISAR (Velocity Interferometry System for Any Reflector) diagnostic has been designed to measure shock velocities, shock breakout times, and shock emission of targets with sizes from 1 to 5 mm. An 8-inch-diameter fused silica triplet lens collects light at f/3 inside the 30-foot-diameter vacuum chamber. The optical relay sends the image out an equatorial port, through a 2-inch-thick vacuum window, and into two interferometers. A 60-kW VISAR probe laser operates at 659.5 nm with variable pulse width. Special coatings on the mirrors and cutoff filters are used to reject the NIF drive laser wavelengths and to pass a band of wavelengths for VISAR, passive shock breakout light, or thermal imaging light (bypassing the interferometers). The first triplet can be no closer than 500 mm from the target chamber center and is protected from debris by a blast window that is replaced after every event. The front end of the optical relay can be temporarily removed from the equatorial port, allowing other experimenters to use that port. A unique resolution pattern has been designed to validate the VISAR diagnostic before each use. All optical lenses are on …

Prochlorococcus is a marine cyanobacterium that numerically dominates the mid-latitude oceans and is the smallest known oxygenic phototroph. Numerous isolatesfrom diverse areas of the world's oceans have been studied and shown to be physiologically and genetically distinct. All isolates described thus far can be assigned to either a tightly clustered high-light (HL)-adapted clade, or a more divergent low-light (LL)-adapted group. The 16S rRNA sequences of the entire Prochlorococcus group differ by at most 3percent, and the four initially published genomes revealed patterns of genetic differentiation that help explain physiological differences among the isolates. Here we describe the genomes of eight newly sequenced isolates and combine them with the first four genomes for a comprehensive analysis of the core (shared by all isolates) and flexible genes of the Prochlorococcus group, and the patterns of loss and gain of the flexible genes over the course of evolution. There are 1,273 genes that represent the core shared by all 12 genomes. They are apparently sufficient, according to metabolic reconstruction, to encode a functional cell. We describe a phylogeny for all 12 isolates by subjecting their complete proteomes to three different phylogenetic analyses. For each non-core gene, we used a maximum parsimony method to …

Article on secreted frizzled related proteins and implications in cancers.